Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5e14
         (674 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64844-2|AAO25987.1|  846|Caenorhabditis elegans Hypothetical pr...    29   3.0  
U64844-1|AAK72092.1|  882|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AL132948-37|CAD31830.2|  410|Caenorhabditis elegans Hypothetical...    28   7.0  
AL021504-1|CAA16428.3|  325|Caenorhabditis elegans Hypothetical ...    27   9.2  

>U64844-2|AAO25987.1|  846|Caenorhabditis elegans Hypothetical
           protein T22F3.3b protein.
          Length = 846

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -3

Query: 657 VEMSGVTILMFASECLKTMFFSSHPHLPHSFERLTASLVTLKPFPRALE 511
           +++ G+T       C+KT  +++H  LP + ER   SL+     PR LE
Sbjct: 353 IDVEGLTWDQAWDICIKTYAYTNHTLLPEALERWPVSLMQ-NLLPRHLE 400


>U64844-1|AAK72092.1|  882|Caenorhabditis elegans Hypothetical
           protein T22F3.3a protein.
          Length = 882

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -3

Query: 657 VEMSGVTILMFASECLKTMFFSSHPHLPHSFERLTASLVTLKPFPRALE 511
           +++ G+T       C+KT  +++H  LP + ER   SL+     PR LE
Sbjct: 389 IDVEGLTWDQAWDICIKTYAYTNHTLLPEALERWPVSLMQ-NLLPRHLE 436


>AL132948-37|CAD31830.2|  410|Caenorhabditis elegans Hypothetical
           protein Y39B6A.38 protein.
          Length = 410

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -3

Query: 606 TMFFSSHPHLPHSFERLTASLVTLKPFPRALEEDK 502
           T  F+S P  P S        +T  P PR +EE+K
Sbjct: 277 TTTFASFPATPDSIPPPIPQRITPSPLPRVIEEEK 311


>AL021504-1|CAA16428.3|  325|Caenorhabditis elegans Hypothetical
           protein Y61B8B.1 protein.
          Length = 325

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = -3

Query: 663 HSVEMSGVTILMFASECLKTMFFSSHPHLPHSFERLTASLVTLKPFPR-ALEEDKDDSIS 487
           H   +  +T + + SECL   FF  H  +        AS++ +   PR A+       ++
Sbjct: 92  HYCMLVSLTFIYYESECLALCFFQKHQKI--------ASVIDVHVIPRYAIIIGSLIFLA 143

Query: 486 FPVFPL 469
           FPV+P+
Sbjct: 144 FPVYPI 149


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,358,505
Number of Sequences: 27780
Number of extensions: 278805
Number of successful extensions: 692
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)