BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5e12
(757 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY748848-1|AAV28194.1| 148|Anopheles gambiae cytochrome P450 pr... 40 8e-05
AY062207-1|AAL58568.1| 504|Anopheles gambiae cytochrome P450 CY... 29 0.12
CR954257-3|CAJ14154.1| 277|Anopheles gambiae predicted protein ... 25 2.5
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 23 7.7
AF236124-1|AAF68382.1| 107|Anopheles gambiae thioredoxin 1 prot... 23 7.7
>AY748848-1|AAV28194.1| 148|Anopheles gambiae cytochrome P450
protein.
Length = 148
Score = 39.9 bits (89), Expect = 8e-05
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 498 ILDGFVDVFNNQARSLVDELAAEADLEKIY-ILNKLSLHSLRLVFKTILGVSDQEVTPEK 674
IL FV+VFN QA LV++LA E D E + + ++L SL ++ +T +G
Sbjct: 4 ILADFVEVFNKQATVLVEKLAKELDNEAGFDCVRYITLCSLDIICETAMGCPVYAQRQSD 63
Query: 675 IQQLFGDK*YPA*YLHKRFQKFWLHSD 755
+ + + L+ R QK WLH D
Sbjct: 64 SEYVRAHEKIGEIMLN-RLQKLWLHPD 89
>AY062207-1|AAL58568.1| 504|Anopheles gambiae cytochrome P450
CYP6S2 protein.
Length = 504
Score = 29.5 bits (63), Expect = 0.12
Identities = 32/138 (23%), Positives = 50/138 (36%), Gaps = 8/138 (5%)
Frame = +3
Query: 99 MFIAVYLFIIIVCIVYFEKCLRR----NAKFPELSRRLPFIGHAHLFVGDSVHLWKIAQR 266
+ +AV++ + +YF R N P L PF +F ++H + Q+
Sbjct: 2 LIVAVFVAFFGIFWIYFHFRQRYLFWLNRDVPFLEPTFPFGNMIDIF-NPNIHFAHLIQK 60
Query: 267 ISRESLQNGGLVTISFGPKKVYAVTDPEDINTVA----NLSMEKSYIYGFSRPWLGDGLF 434
+ R+ G V + F V V PE TV N +++ L LF
Sbjct: 61 LYRQLKDRGDYVGLFFFRDPVLLVLSPEFARTVMVKDFNYFVDRGVYSNEEFDPLSANLF 120
Query: 435 TADVLTWRNNRRLLNQAF 488
+ WR R L F
Sbjct: 121 FMEGAKWRKLRSKLTPTF 138
>CR954257-3|CAJ14154.1| 277|Anopheles gambiae predicted protein
protein.
Length = 277
Score = 25.0 bits (52), Expect = 2.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 431 QTVTQPRPREAIDVTFFHRQISHGVD 354
QT T R R + TF RQ++HG D
Sbjct: 154 QTQTFARNRPNVRYTFLLRQLNHGGD 179
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 23.4 bits (48), Expect = 7.7
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = -3
Query: 554 FIHQTPGLIIENVNKAIQNGVFKGLIQKSSVVS 456
F+H + GLI N+ +I+ K ++ + V+S
Sbjct: 353 FLHTSNGLIHVNIQPSIEGVETKPIVPANPVIS 385
>AF236124-1|AAF68382.1| 107|Anopheles gambiae thioredoxin 1
protein.
Length = 107
Score = 23.4 bits (48), Expect = 7.7
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +3
Query: 327 VYAVTDPEDINTVANLSMEKSYIYGFSRPWLG 422
VY V D ED N + ++ + F W G
Sbjct: 2 VYMVKDSEDFNNKLEAAGDQLVVVDFFATWCG 33
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 827,351
Number of Sequences: 2352
Number of extensions: 17770
Number of successful extensions: 57
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -