Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5e10
         (236 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72502-1|CAA96585.2|  430|Caenorhabditis elegans Hypothetical pr...    25   5.4  
U39644-2|AAA80360.2|  966|Caenorhabditis elegans Hypothetical pr...    25   7.2  
AF125442-2|AAD12792.1|  360|Caenorhabditis elegans Serpentine re...    25   7.2  
Z68118-1|CAA92186.2| 1014|Caenorhabditis elegans Hypothetical pr...    25   9.5  
AF235027-1|AAF68380.1| 1017|Caenorhabditis elegans guanylyl cycl...    25   9.5  

>Z72502-1|CAA96585.2|  430|Caenorhabditis elegans Hypothetical
           protein C08B6.2 protein.
          Length = 430

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 57  FPGLISYECWKSYPRWLCY 113
           + GL +Y+CWK   R L Y
Sbjct: 122 YGGLKNYKCWKEVDRHLVY 140


>U39644-2|AAA80360.2|  966|Caenorhabditis elegans Hypothetical
           protein T10E10.4 protein.
          Length = 966

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 18  KQRCALNIPNIQCFPGLISY-ECWKSYPR 101
           K++   N+P  QC  G++ Y  C+   PR
Sbjct: 902 KKKSDKNVPQCQCTNGMLLYGRCFSQCPR 930


>AF125442-2|AAD12792.1|  360|Caenorhabditis elegans Serpentine
           receptor, class v protein19 protein.
          Length = 360

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 54  IECLVCLVHSVVLWSFFQ 1
           I CL+CL+   ++W F +
Sbjct: 242 ISCLICLIFYSLIWKFIK 259


>Z68118-1|CAA92186.2| 1014|Caenorhabditis elegans Hypothetical
           protein R01E6.1 protein.
          Length = 1014

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +1

Query: 37  TYQTFNVFPGLSHTNAGNHI-HVGSVIDEIR 126
           T +T+ V  G+ H N G HI  V  +  EIR
Sbjct: 874 TGETYMVASGVPHENEGRHIFEVAEISLEIR 904


>AF235027-1|AAF68380.1| 1017|Caenorhabditis elegans guanylyl cyclase
           protein.
          Length = 1017

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +1

Query: 37  TYQTFNVFPGLSHTNAGNHI-HVGSVIDEIR 126
           T +T+ V  G+ H N G HI  V  +  EIR
Sbjct: 877 TGETYMVASGVPHENEGRHIFEVAEISLEIR 907


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,292,501
Number of Sequences: 27780
Number of extensions: 61578
Number of successful extensions: 141
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 12,740,198
effective HSP length: 58
effective length of database: 11,128,958
effective search space used: 222579160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)