Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5e09
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   3.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   4.1  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 94  IFASNFVYIY*SFQCR 47
           IFAS F YI+  F C+
Sbjct: 385 IFASYFAYIFGKFACK 400


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 94  IFASNFVYIY*SFQCR 47
           IFAS F YI+  F C+
Sbjct: 385 IFASYFAYIFGKFACK 400


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 94  IFASNFVYIY*SFQCR 47
           IFAS F YI+  F C+
Sbjct: 385 IFASYFAYIFGKFACK 400


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 94  IFASNFVYIY*SFQCR 47
           IFAS F YI+  F C+
Sbjct: 385 IFASYFAYIFGKFACK 400


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 98  FYLRFKFCLHLLIISMQMKL*LCTMY 21
           +Y+   FC   +I +M +   LC  Y
Sbjct: 262 YYMHLLFCCAFIIFTMHLLFLLCIYY 287


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 321 CP*CSRLTEYRH 356
           CP C  +TEY+H
Sbjct: 233 CPKCPFITEYKH 244


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 581 PPDLKFFNRENRPDLP 628
           PP  KFFN   R D P
Sbjct: 72  PPKTKFFNLIKRKDSP 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,079
Number of Sequences: 336
Number of extensions: 3760
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)