Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5e09
         (686 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC052611-1|AAH52611.1|  262|Homo sapiens PXN protein protein.          33   0.95 
AK026695-1|BAB15529.1|  173|Homo sapiens protein ( Homo sapiens ...    33   0.95 
AB209034-1|BAD92271.1|  713|Homo sapiens Paxillin variant protein.     33   0.95 
BC073816-1|AAH73816.1|  187|Homo sapiens similar to beta-1,4-man...    31   5.1  

>BC052611-1|AAH52611.1|  262|Homo sapiens PXN protein protein.
          Length = 262

 Score = 33.1 bits (72), Expect = 0.95
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = -2

Query: 361 DSCLYSVSREHQGQIDSILPPATTEISNASRCHDFVSCKKTFDIQTQY*PANP 203
           +  L++V  E QG+    LP  T+E+S A RCH  V C  +  +Q    P  P
Sbjct: 13  EGSLWAVGTESQGRDWRHLPTITSELSGAPRCHT-VPCAGSTALQEPGEPQGP 64


>AK026695-1|BAB15529.1|  173|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23042 fis, clone LNG02323. ).
          Length = 173

 Score = 33.1 bits (72), Expect = 0.95
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = -2

Query: 361 DSCLYSVSREHQGQIDSILPPATTEISNASRCHDFVSCKKTFDIQTQY*PANP 203
           +  L++V  E QG+    LP  T+E+S A RCH  V C  +  +Q    P  P
Sbjct: 13  EGSLWAVGTESQGRDWRHLPTITSELSGAPRCHT-VPCAGSTALQEPGEPQGP 64


>AB209034-1|BAD92271.1|  713|Homo sapiens Paxillin variant protein.
          Length = 713

 Score = 33.1 bits (72), Expect = 0.95
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = -2

Query: 361 DSCLYSVSREHQGQIDSILPPATTEISNASRCHDFVSCKKTFDIQTQY*PANP 203
           +  L++V  E QG+    LP  T+E+S A RCH  V C  +  +Q    P  P
Sbjct: 376 EGSLWAVGTESQGRDWRHLPTITSELSGAPRCHT-VPCAGSTALQEPGEPQGP 427


>BC073816-1|AAH73816.1|  187|Homo sapiens similar to
           beta-1,4-mannosyltransferase; beta-1,4
           mannosyltransferase protein.
          Length = 187

 Score = 30.7 bits (66), Expect = 5.1
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = +1

Query: 301 AGELNQFVPDALGSQNIDMNQDWLANIEPEAVNRHLWSGDGLQLLRRILEPRD 459
           AG+LNQF  D   SQ +  ++ W+  + P  ++        +QLL + L+PRD
Sbjct: 126 AGKLNQFWKDLRESQQLRWDESWVQTVLPLVMD--------IQLLGQRLKPRD 170


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,042,778
Number of Sequences: 237096
Number of extensions: 2160898
Number of successful extensions: 4194
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4194
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)