BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5e04
(766 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT016138-1|AAV37023.1| 358|Drosophila melanogaster AT29763p pro... 31 1.3
BT001261-1|AAN71017.1| 358|Drosophila melanogaster AT02529p pro... 31 1.3
AE013599-269|AAM70840.1| 358|Drosophila melanogaster CG30156-PA... 31 1.3
BT024302-1|ABC86364.1| 419|Drosophila melanogaster IP12379p pro... 31 2.3
AE014297-3780|AAF56452.2| 417|Drosophila melanogaster CG31087-P... 31 2.3
AY051428-1|AAK92852.1| 405|Drosophila melanogaster GH10454p pro... 29 9.2
AE014297-3784|AAF56456.2| 405|Drosophila melanogaster CG10562-P... 29 9.2
>BT016138-1|AAV37023.1| 358|Drosophila melanogaster AT29763p
protein.
Length = 358
Score = 31.5 bits (68), Expect = 1.3
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = -3
Query: 719 MPESIALHR-ENYSIDYISNLVENLKTVHFRRPLPNSEYHLAPTYCASFLSNATHTGVRC 543
MP+ +L++ + I ++ LV T+HF P + L T+ A LS H
Sbjct: 205 MPQRQSLYQTQQLVIGVVAALVFLFVTMHFIAGAPAYSFTLTRTHSARRLSRTNHIAYYM 264
Query: 542 NP--LPKYTHSSPLSI*LNVYKIH 477
NP L KYT + + + +++
Sbjct: 265 NPTTLSKYTEQQLAELEVEIEEVY 288
>BT001261-1|AAN71017.1| 358|Drosophila melanogaster AT02529p
protein.
Length = 358
Score = 31.5 bits (68), Expect = 1.3
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = -3
Query: 719 MPESIALHR-ENYSIDYISNLVENLKTVHFRRPLPNSEYHLAPTYCASFLSNATHTGVRC 543
MP+ +L++ + I ++ LV T+HF P + L T+ A LS H
Sbjct: 205 MPQRQSLYQTQQLVIGVVAALVFLFVTMHFIAGAPAYSFTLTRTHSARRLSRTNHIAYYM 264
Query: 542 NP--LPKYTHSSPLSI*LNVYKIH 477
NP L KYT + + + +++
Sbjct: 265 NPTTLSKYTEQQLAELEVEIEEVY 288
>AE013599-269|AAM70840.1| 358|Drosophila melanogaster CG30156-PA
protein.
Length = 358
Score = 31.5 bits (68), Expect = 1.3
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = -3
Query: 719 MPESIALHR-ENYSIDYISNLVENLKTVHFRRPLPNSEYHLAPTYCASFLSNATHTGVRC 543
MP+ +L++ + I ++ LV T+HF P + L T+ A LS H
Sbjct: 205 MPQRQSLYQTQQLVIGVVAALVFLFVTMHFIAGAPAYSFTLTRTHSARRLSRTNHIAYYM 264
Query: 542 NP--LPKYTHSSPLSI*LNVYKIH 477
NP L KYT + + + +++
Sbjct: 265 NPTTLSKYTEQQLAELEVEIEEVY 288
>BT024302-1|ABC86364.1| 419|Drosophila melanogaster IP12379p
protein.
Length = 419
Score = 30.7 bits (66), Expect = 2.3
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 674 YISNLVENLKTVHFRRPLP 618
Y NL+ENLK + + RPLP
Sbjct: 324 YFDNLIENLKLLQYHRPLP 342
>AE014297-3780|AAF56452.2| 417|Drosophila melanogaster CG31087-PA
protein.
Length = 417
Score = 30.7 bits (66), Expect = 2.3
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 674 YISNLVENLKTVHFRRPLP 618
Y NL+ENLK + + RPLP
Sbjct: 322 YFDNLIENLKLLQYHRPLP 340
>AY051428-1|AAK92852.1| 405|Drosophila melanogaster GH10454p
protein.
Length = 405
Score = 28.7 bits (61), Expect = 9.2
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -3
Query: 674 YISNLVENLKTVHFRRPLPN-SEYHLAPTYCASFLSNATHTGVRCNPLPKYTHSSPL 507
Y NLVE+LK + + +P+P+ + HLA + + TGV L T S+ L
Sbjct: 312 YHDNLVEHLKILKYSKPIPSLRDIHLA-LFKYGYFGYTVATGVMSAVLLDPTDSASL 367
>AE014297-3784|AAF56456.2| 405|Drosophila melanogaster CG10562-PA
protein.
Length = 405
Score = 28.7 bits (61), Expect = 9.2
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -3
Query: 674 YISNLVENLKTVHFRRPLPN-SEYHLAPTYCASFLSNATHTGVRCNPLPKYTHSSPL 507
Y NLVE+LK + + +P+P+ + HLA + + TGV L T S+ L
Sbjct: 312 YHDNLVEHLKILKYSKPIPSLRDIHLA-LFKYGYFGYTVATGVMSAVLLDPTDSASL 367
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,857,337
Number of Sequences: 53049
Number of extensions: 760278
Number of successful extensions: 1396
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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