Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5e02
         (434 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.24 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.24 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.24 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.24 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   0.24 
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   3.8  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   5.1  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   5.1  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   5.1  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      20   8.9  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 234 FNDNCDLYEYNCDEKKQYRHVKMDVCKYEAAASE 335
           F+D  ++ ++N DE +  R VK+ V   + AAS+
Sbjct: 617 FDDAFEISDHNDDETQVNRFVKLLVATIDEAASD 650


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 234 FNDNCDLYEYNCDEKKQYRHVKMDVCKYEAAASE 335
           F+D  ++ ++N DE +  R VK+ V   + AAS+
Sbjct: 617 FDDAFEISDHNDDETQVNRFVKLLVATIDEAASD 650


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 234 FNDNCDLYEYNCDEKKQYRHVKMDVCKYEAAASE 335
           F+D  ++ ++N DE +  R VK+ V   + AAS+
Sbjct: 617 FDDAFEISDHNDDETQVNRFVKLLVATIDEAASD 650


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 234 FNDNCDLYEYNCDEKKQYRHVKMDVCKYEAAASE 335
           F+D  ++ ++N DE +  R VK+ V   + AAS+
Sbjct: 617 FDDAFEISDHNDDETQVNRFVKLLVATIDEAASD 650


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +3

Query: 48  RKLLTSLIITGLAAEVWCHVEIEAEDYFFPLEPVINFC 161
           +K L S+ I  + +E++C V     + +F L    +FC
Sbjct: 7   KKFLHSVRIVFVQSEIFCLVNFNHRESYFRLSKAKSFC 44


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -3

Query: 345 NPSFLRQQLHICKHPFSRDDIASSRH 268
           +P++++ QLH+     S   IAS+ +
Sbjct: 185 SPNYIKPQLHVSTGSTSSPTIASATY 210


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 216 LGISRMFNDNCDLYEYNC 269
           L I  M N NC L+  NC
Sbjct: 163 LHIITMINMNCALWYINC 180


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 216 LGISRMFNDNCDLYEYNC 269
           L I  M N NC L+  NC
Sbjct: 163 LHIITMINMNCALWYINC 180


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 216 LGISRMFNDNCDLYEYNC 269
           L I  M N NC L+  NC
Sbjct: 163 LHIITMINMNCALWYINC 180


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 6/24 (25%), Positives = 15/24 (62%)
 Frame = +3

Query: 231 MFNDNCDLYEYNCDEKKQYRHVKM 302
           +F++     +YN  +K+Q+ H+ +
Sbjct: 147 VFSEVLLFLDYNPSQKRQFLHITL 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,301
Number of Sequences: 336
Number of extensions: 1639
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)