Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5d24
(667 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC31G5.14 |gcv1|n313|glycine decarboxylase T subunit|Schizosac... 124 9e-30
SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|c... 29 0.46
SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces... 27 1.8
SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting endonucl... 27 1.8
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 27 2.4
SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomy... 27 2.4
SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain protein|Schizosacchar... 26 4.2
SPAC6B12.16 |meu26||conserved fungal protein|Schizosaccharomyces... 26 5.6
SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce... 25 7.4
SPAC23C11.04c |pnk1||DNA kinase/phosphatase Pnk1|Schizosaccharom... 25 9.8
>SPAC31G5.14 |gcv1|n313|glycine decarboxylase T
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 124 bits (300), Expect = 9e-30
Identities = 61/131 (46%), Positives = 88/131 (67%)
Frame = +1
Query: 169 KTPLYELHKKYGGKLVNFAGFLLPVQYVDTSVSASHLFTRQNASIFDVSHMLQTNVSGKD 348
+TPLY+LH K G +V FAGF +PVQY ++SASH +TR+++ +FDVSHM+Q V G++
Sbjct: 24 RTPLYDLHLKEGATIVPFAGFSMPVQYKGQTISASHKWTREHSGLFDVSHMVQWFVRGEN 83
Query: 349 CLPWFESICPVDLKGLANGSSSLTVFLNDNGGIIDDLIVTKVNEQQLYIVSNAGRLEVDK 528
+ ESI P LK L S+L+ F N+ GGIIDD I++K +E YIV+NA E D+
Sbjct: 84 ATAYLESITPSSLKELKPFHSTLSAFTNETGGIIDDTIISKQDENTYYIVTNAACSEKDE 143
Query: 529 QHMLETSELFK 561
++ + E +K
Sbjct: 144 ANLKKHIENWK 154
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 599 VNDRALLALQGPKAAKLLQTL 661
V RAL+A+QGP+ A ++Q L
Sbjct: 161 VQGRALIAIQGPETASVVQKL 181
>SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1316
Score = 29.5 bits (63), Expect = 0.46
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1
Query: 175 PLYELHKKYGGKLVNFAGFLLPVQYVDTSVSASHLFTRQNASIFDVSHM 321
P++ KK+ G++ N F+L V Y + + H F R F H+
Sbjct: 1061 PMFGRAKKFCGRMANLWRFVLDVTYPQAAYTTGHEFNRGIWKTFGEIHI 1109
>SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 995
Score = 27.5 bits (58), Expect = 1.8
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +1
Query: 142 QYSDEKSPIKTPLYELHKKYGGKLVNFAGFLLPVQYVDTSVSASHLF--TRQNASIFDVS 315
Q+S PLY ++G + NF+ P ++ T VS + TR + IF+
Sbjct: 137 QFSKRTDVWDAPLYHFQPQFGDRTYNFSFNSQPFEFWVTRVSDGEVLFDTRGHKLIFEDQ 196
Query: 316 HM-LQTNV 336
++ L TN+
Sbjct: 197 YIELTTNM 204
>SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting
endonuclease Cce1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 258
Score = 27.5 bits (58), Expect = 1.8
Identities = 22/119 (18%), Positives = 53/119 (44%)
Frame = +1
Query: 193 KKYGGKLVNFAGFLLPVQYVDTSVSASHLFTRQNASIFDVSHMLQTNVSGKDCLPWFESI 372
++Y + + L V +++ + A H ++N+ + + ++S K ++ S+
Sbjct: 119 QRYRSGIATIPEWTLRVNMLESMLYALHYAEKRNSIEQKIQYPFLLSLSPKSTYSYWASV 178
Query: 373 CPVDLKGLANGSSSLTVFLNDNGGIIDDLIVTKVNEQQLYIVSNAGRLEVDKQHMLETS 549
++ K + S + + +ID + NE+ LY +N R+E K M +++
Sbjct: 179 --LNTKASFSKKKSRVQMVKE---LIDGQKILFENEEALYKWNNGSRVEFKKDDMADSA 232
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 623 VLEVLCRSHPRS*HFTSLPLFLNNSEVS 540
V+ LC SHPR H+ +L + E+S
Sbjct: 233 VMRALCTSHPRGIHWRDSRSYLLSQEIS 260
>SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 435
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 246 IR*YKC-FCFPSFHQTECIDI*RISHVTNKCQ 338
IR ++C CF F+ T+C + R HV+ CQ
Sbjct: 169 IRKFQCNVCFDEFNGTDCFQLTRCGHVS--CQ 198
>SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 682
Score = 26.2 bits (55), Expect = 4.2
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 77 YFCLLPNSLEAELGYQFFVITDSIVMR 157
++C+ PN ++ G FFV I+ R
Sbjct: 588 FYCIFPNHIQHSSGISFFVTLAEIMRR 614
>SPAC6B12.16 |meu26||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 344
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = +1
Query: 85 FASKLTRGRVRLPVFCNYRQYSDEKSPIKTPLYELHKKY 201
F+S L R CN+ +D +TP L+ K+
Sbjct: 121 FSSNLNHSNNRRQTICNFNMANDASKENETPYMVLNNKF 159
>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2310
Score = 25.4 bits (53), Expect = 7.4
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 394 LANGSSSLTVFLNDNGGIIDDLIVTKVNEQQLYIVSNA 507
LAN S L + G++ L TK+NE+Q IVS A
Sbjct: 1758 LANMSHELRTPFSSFYGMLSLLSDTKLNEEQYDIVSTA 1795
>SPAC23C11.04c |pnk1||DNA kinase/phosphatase
Pnk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 25.0 bits (52), Expect = 9.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 358 WFESICPVDLKGLANGSSSLTVFLNDNG 441
W S+ P LK L + SL +F N NG
Sbjct: 98 WHPSVVP-KLKALYQDNYSLVIFSNQNG 124
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,678,916
Number of Sequences: 5004
Number of extensions: 54656
Number of successful extensions: 168
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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