Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5d24
(667 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D13811-1|BAA02967.1| 403|Homo sapiens glycine cleavage system T... 132 8e-31
BC007546-1|AAH07546.2| 383|Homo sapiens AMT protein protein. 132 8e-31
D14686-1|BAA03512.1| 403|Homo sapiens glycine cleavage system T... 132 1e-30
BC106017-1|AAI06018.1| 867|Homo sapiens SETX protein protein. 30 6.5
BC078166-1|AAH78166.1| 917|Homo sapiens SETX protein protein. 30 6.5
BC032622-1|AAH32622.2| 1030|Homo sapiens SETX protein protein. 30 6.5
BC032600-1|AAH32600.1| 828|Homo sapiens SETX protein protein. 30 6.5
AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor aprax... 30 6.5
AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein. 30 6.5
AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein. 30 6.5
AK022902-1|BAB14299.1| 324|Homo sapiens protein ( Homo sapiens ... 30 6.5
AK001456-1|BAA91701.1| 828|Homo sapiens protein ( Homo sapiens ... 30 6.5
AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein. 30 6.5
>D13811-1|BAA02967.1| 403|Homo sapiens glycine cleavage system
T-protein protein.
Length = 403
Score = 132 bits (320), Expect = 8e-31
Identities = 70/159 (44%), Positives = 96/159 (60%)
Frame = +1
Query: 169 KTPLYELHKKYGGKLVNFAGFLLPVQYVDTSVSASHLFTRQNASIFDVSHMLQTNVSGKD 348
+TPLY+ H +GGK+V FAG+ LPVQY D+ SHL TRQ+ S+FDVSHMLQT + G D
Sbjct: 35 RTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHTD-SHLHTRQHCSLFDVSHMLQTKILGSD 93
Query: 349 CLPWFESICPVDLKGLANGSSSLTVFLNDNGGIIDDLIVTKVNEQQLYIVSNAGRLEVDK 528
+ ES+ D+ L +L++F N+ GGI+DDLIVT +E LY+VSNAG E D
Sbjct: 94 RVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKDL 153
Query: 529 QHMLETSELFKKRGNDVKCQLLGCERQSTSSTTGAESSQ 645
M + + +G DV ++L + T A+ Q
Sbjct: 154 ALMQDKVRELQNQGRDVGLEVLDNALLALQGPTAAQVLQ 192
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 596 DVNDRALLALQGPKAAKLLQ 655
+V D ALLALQGP AA++LQ
Sbjct: 173 EVLDNALLALQGPTAAQVLQ 192
>BC007546-1|AAH07546.2| 383|Homo sapiens AMT protein protein.
Length = 383
Score = 132 bits (320), Expect = 8e-31
Identities = 70/159 (44%), Positives = 96/159 (60%)
Frame = +1
Query: 169 KTPLYELHKKYGGKLVNFAGFLLPVQYVDTSVSASHLFTRQNASIFDVSHMLQTNVSGKD 348
+TPLY+ H +GGK+V FAG+ LPVQY D+ SHL TRQ+ S+FDVSHMLQT + G D
Sbjct: 32 RTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHTD-SHLHTRQHCSLFDVSHMLQTKILGSD 90
Query: 349 CLPWFESICPVDLKGLANGSSSLTVFLNDNGGIIDDLIVTKVNEQQLYIVSNAGRLEVDK 528
+ ES+ D+ L +L++F N+ GGI+DDLIVT +E LY+VSNAG E D
Sbjct: 91 RVKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKDL 150
Query: 529 QHMLETSELFKKRGNDVKCQLLGCERQSTSSTTGAESSQ 645
M + + +G DV ++L + T A+ Q
Sbjct: 151 ALMQDKVRELQNQGRDVGLEVLDNALLALQGPTAAQVLQ 189
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 596 DVNDRALLALQGPKAAKLLQ 655
+V D ALLALQGP AA++LQ
Sbjct: 170 EVLDNALLALQGPTAAQVLQ 189
>D14686-1|BAA03512.1| 403|Homo sapiens glycine cleavage system
T-protein protein.
Length = 403
Score = 132 bits (318), Expect = 1e-30
Identities = 70/159 (44%), Positives = 95/159 (59%)
Frame = +1
Query: 169 KTPLYELHKKYGGKLVNFAGFLLPVQYVDTSVSASHLFTRQNASIFDVSHMLQTNVSGKD 348
+TPLY+ H +GGK+V FAG+ LPVQY D+ SHL TRQ+ S+FDVSHMLQT + G D
Sbjct: 35 RTPLYDFHLAHGGKMVAFAGWSLPVQYRDSHTD-SHLHTRQHCSLFDVSHMLQTKILGSD 93
Query: 349 CLPWFESICPVDLKGLANGSSSLTVFLNDNGGIIDDLIVTKVNEQQLYIVSNAGRLEVDK 528
ES+ D+ L +L++F N+ GGI+DDLIVT +E LY+VSNAG E D
Sbjct: 94 RCKLMESLVVGDIAELRPNQGTLSLFTNEAGGILDDLIVTNTSEGHLYVVSNAGCWEKDL 153
Query: 529 QHMLETSELFKKRGNDVKCQLLGCERQSTSSTTGAESSQ 645
M + + +G DV ++L + T A+ Q
Sbjct: 154 ALMQDKVRELQNQGRDVGLEVLDNALLALQGPTAAQVLQ 192
Score = 30.3 bits (65), Expect = 6.5
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 596 DVNDRALLALQGPKAAKLLQ 655
+V D ALLALQGP AA++LQ
Sbjct: 173 EVLDNALLALQGPTAAQVLQ 192
>BC106017-1|AAI06018.1| 867|Homo sapiens SETX protein protein.
Length = 867
Score = 30.3 bits (65), Expect = 6.5
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = +2
Query: 59 QSSCVQYFCLLPNSLEAELGYQFFVITDSIVMRKARLKLRYMSYIRSTVEN 211
Q CV C+ NS++ +G+ + ++ + +A+ L + ++R+ +EN
Sbjct: 571 QKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMEN 621
>BC078166-1|AAH78166.1| 917|Homo sapiens SETX protein protein.
Length = 917
Score = 30.3 bits (65), Expect = 6.5
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = +2
Query: 59 QSSCVQYFCLLPNSLEAELGYQFFVITDSIVMRKARLKLRYMSYIRSTVEN 211
Q CV C+ NS++ +G+ + ++ + +A+ L + ++R+ +EN
Sbjct: 621 QKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMEN 671
>BC032622-1|AAH32622.2| 1030|Homo sapiens SETX protein protein.
Length = 1030
Score = 30.3 bits (65), Expect = 6.5
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = +2
Query: 59 QSSCVQYFCLLPNSLEAELGYQFFVITDSIVMRKARLKLRYMSYIRSTVEN 211
Q CV C+ NS++ +G+ + ++ + +A+ L + ++R+ +EN
Sbjct: 734 QKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMEN 784
>BC032600-1|AAH32600.1| 828|Homo sapiens SETX protein protein.
Length = 828
Score = 30.3 bits (65), Expect = 6.5
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = +2
Query: 59 QSSCVQYFCLLPNSLEAELGYQFFVITDSIVMRKARLKLRYMSYIRSTVEN 211
Q CV C+ NS++ +G+ + ++ + +A+ L + ++R+ +EN
Sbjct: 532 QKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMEN 582
>AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor apraxia
protein 2 protein.
Length = 2677
Score = 30.3 bits (65), Expect = 6.5
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = +2
Query: 59 QSSCVQYFCLLPNSLEAELGYQFFVITDSIVMRKARLKLRYMSYIRSTVEN 211
Q CV C+ NS++ +G+ + ++ + +A+ L + ++R+ +EN
Sbjct: 2381 QKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMEN 2431
>AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein.
Length = 2677
Score = 30.3 bits (65), Expect = 6.5
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = +2
Query: 59 QSSCVQYFCLLPNSLEAELGYQFFVITDSIVMRKARLKLRYMSYIRSTVEN 211
Q CV C+ NS++ +G+ + ++ + +A+ L + ++R+ +EN
Sbjct: 2381 QKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMEN 2431
>AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein.
Length = 2677
Score = 30.3 bits (65), Expect = 6.5
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = +2
Query: 59 QSSCVQYFCLLPNSLEAELGYQFFVITDSIVMRKARLKLRYMSYIRSTVEN 211
Q CV C+ NS++ +G+ + ++ + +A+ L + ++R+ +EN
Sbjct: 2381 QKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMEN 2431
>AK022902-1|BAB14299.1| 324|Homo sapiens protein ( Homo sapiens
cDNA FLJ12840 fis, clone NT2RP2003277, weakly similar to
NAM7 PROTEIN. ).
Length = 324
Score = 30.3 bits (65), Expect = 6.5
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = +2
Query: 59 QSSCVQYFCLLPNSLEAELGYQFFVITDSIVMRKARLKLRYMSYIRSTVEN 211
Q CV C+ NS++ +G+ + ++ + +A+ L + ++R+ +EN
Sbjct: 28 QKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMEN 78
>AK001456-1|BAA91701.1| 828|Homo sapiens protein ( Homo sapiens
cDNA FLJ10594 fis, clone NT2RP2004689. ).
Length = 828
Score = 30.3 bits (65), Expect = 6.5
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = +2
Query: 59 QSSCVQYFCLLPNSLEAELGYQFFVITDSIVMRKARLKLRYMSYIRSTVEN 211
Q CV C+ NS++ +G+ + ++ + +A+ L + ++R+ +EN
Sbjct: 532 QKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMEN 582
>AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein.
Length = 2663
Score = 30.3 bits (65), Expect = 6.5
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = +2
Query: 59 QSSCVQYFCLLPNSLEAELGYQFFVITDSIVMRKARLKLRYMSYIRSTVEN 211
Q CV C+ NS++ +G+ + ++ + +A+ L + ++R+ +EN
Sbjct: 2367 QKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMEN 2417
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,731,580
Number of Sequences: 237096
Number of extensions: 1848601
Number of successful extensions: 3778
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3775
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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