Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5d24
(667 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64842-10|AAB37080.1| 402|Caenorhabditis elegans Hypothetical p... 147 7e-36
Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical ... 29 3.0
AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical ... 29 3.0
AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical ... 29 3.0
Z81125-4|CAB03383.3| 594|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z81088-11|CAB03132.1| 339|Caenorhabditis elegans Hypothetical p... 28 5.2
AF125963-1|AAD14742.1| 339|Caenorhabditis elegans Serpentine re... 28 5.2
AC006757-4|AAF60545.1| 610|Caenorhabditis elegans Hypothetical ... 28 5.2
AC024761-10|AAP13759.1| 501|Caenorhabditis elegans Cop-9 signal... 28 6.8
>U64842-10|AAB37080.1| 402|Caenorhabditis elegans Hypothetical
protein F25B4.1 protein.
Length = 402
Score = 147 bits (356), Expect = 7e-36
Identities = 70/166 (42%), Positives = 110/166 (66%)
Frame = +1
Query: 154 EKSPIKTPLYELHKKYGGKLVNFAGFLLPVQYVDTSVSASHLFTRQNASIFDVSHMLQTN 333
E S +T L E HKK+GGKLV FAG+ +P QY D S+ S + TR++ S+FDVSHMLQT
Sbjct: 22 EASAKQTCLIETHKKHGGKLVEFAGYDMPTQYADFSIKESTIHTRKHVSLFDVSHMLQTY 81
Query: 334 VSGKDCLPWFESICPVDLKGLANGSSSLTVFLNDNGGIIDDLIVTKVNEQQLYIVSNAGR 513
++GKD + + ES+ D++GL S +L+VF N+ GGI DDLI+ K ++ L++V+NAG
Sbjct: 82 ITGKDRVAFIESLTTADVQGLQENSGTLSVFTNEKGGIKDDLIIMKTDKDFLFLVTNAGC 141
Query: 514 LEVDKQHMLETSELFKKRGNDVKCQLLGCERQSTSSTTGAESSQII 651
+E D ++ E + ++ +G DVK + L + + + G E ++++
Sbjct: 142 IEKDLPYLQENAAAWRSKGKDVKIETL--DNRGLVAVQGPEMAKVL 185
>Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical protein
F36H2.1c protein.
Length = 1071
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +2
Query: 218 ILLVSYFLCNTLIQVFLLPIFSPDRMHRYLTYLTCYKQMSAVKIACRGSSQFAPWILKGL 397
+L+V+Y C T++ VF L + LTY YK++ K F W+L L
Sbjct: 900 VLMVAYSTCYTMLPVFSLVVDRDVTATNALTYPELYKELG--KGRSLSYKTFCIWVLISL 957
>Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical protein
F36H2.1b protein.
Length = 1035
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +2
Query: 218 ILLVSYFLCNTLIQVFLLPIFSPDRMHRYLTYLTCYKQMSAVKIACRGSSQFAPWILKGL 397
+L+V+Y C T++ VF L + LTY YK++ K F W+L L
Sbjct: 864 VLMVAYSTCYTMLPVFSLVVDRDVTATNALTYPELYKELG--KGRSLSYKTFCIWVLISL 921
>Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical protein
F36H2.1a protein.
Length = 1074
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +2
Query: 218 ILLVSYFLCNTLIQVFLLPIFSPDRMHRYLTYLTCYKQMSAVKIACRGSSQFAPWILKGL 397
+L+V+Y C T++ VF L + LTY YK++ K F W+L L
Sbjct: 903 VLMVAYSTCYTMLPVFSLVVDRDVTATNALTYPELYKELG--KGRSLSYKTFCIWVLISL 960
>AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical
protein F36H2.1c protein.
Length = 1071
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +2
Query: 218 ILLVSYFLCNTLIQVFLLPIFSPDRMHRYLTYLTCYKQMSAVKIACRGSSQFAPWILKGL 397
+L+V+Y C T++ VF L + LTY YK++ K F W+L L
Sbjct: 900 VLMVAYSTCYTMLPVFSLVVDRDVTATNALTYPELYKELG--KGRSLSYKTFCIWVLISL 957
>AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical
protein F36H2.1b protein.
Length = 1035
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +2
Query: 218 ILLVSYFLCNTLIQVFLLPIFSPDRMHRYLTYLTCYKQMSAVKIACRGSSQFAPWILKGL 397
+L+V+Y C T++ VF L + LTY YK++ K F W+L L
Sbjct: 864 VLMVAYSTCYTMLPVFSLVVDRDVTATNALTYPELYKELG--KGRSLSYKTFCIWVLISL 921
>AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical
protein F36H2.1a protein.
Length = 1074
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +2
Query: 218 ILLVSYFLCNTLIQVFLLPIFSPDRMHRYLTYLTCYKQMSAVKIACRGSSQFAPWILKGL 397
+L+V+Y C T++ VF L + LTY YK++ K F W+L L
Sbjct: 903 VLMVAYSTCYTMLPVFSLVVDRDVTATNALTYPELYKELG--KGRSLSYKTFCIWVLISL 960
>Z81125-4|CAB03383.3| 594|Caenorhabditis elegans Hypothetical
protein T22A3.6 protein.
Length = 594
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/79 (22%), Positives = 42/79 (53%)
Frame = +1
Query: 328 TNVSGKDCLPWFESICPVDLKGLANGSSSLTVFLNDNGGIIDDLIVTKVNEQQLYIVSNA 507
T+VSGK C+PW ++ + L + S+S V+ + + +D E +L++ + A
Sbjct: 440 TSVSGKQCIPWTQATSEI-LSMVKVNSTSSGVYHMYHRLLFED-PSQFFTESRLFMNTEA 497
Query: 508 GRLEVDKQHMLETSELFKK 564
+ +++++ +E +K+
Sbjct: 498 SCMLLNRRNSVEVKNSYKE 516
>Z81088-11|CAB03132.1| 339|Caenorhabditis elegans Hypothetical
protein F53F1.11 protein.
Length = 339
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 98 SLEAELGYQFFVITDSIVMRKARLKLRYMSYIRSTVE 208
SL GY+F+++ + + R LK+ M YI S V+
Sbjct: 105 SLLISFGYRFYILHNPALSRLTLLKITIMFYIPSLVQ 141
>AF125963-1|AAD14742.1| 339|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 20 protein.
Length = 339
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 98 SLEAELGYQFFVITDSIVMRKARLKLRYMSYIRSTVE 208
SL GY+F+++ + + R LK+ M YI S V+
Sbjct: 105 SLLISFGYRFYILHNPALSRLTLLKISIMFYILSLVQ 141
>AC006757-4|AAF60545.1| 610|Caenorhabditis elegans Hypothetical
protein Y40C7B.5 protein.
Length = 610
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 481 QQLYIVSNAGRLEVDKQHMLETSELFKKRGNDVKCQ 588
+ +Y++S+ ++ D + SE KK GN V C+
Sbjct: 440 RNIYVLSSMNTIQSDSEIFSFISESLKKHGNSVACK 475
>AC024761-10|AAP13759.1| 501|Caenorhabditis elegans Cop-9
signalosome subunit protein 3 protein.
Length = 501
Score = 27.9 bits (59), Expect = 6.8
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 397 ANGSSSLTVFLNDNGGIIDDLIVTKVNE--QQLYIVSNAGRLEVDKQHMLETSELFKKRG 570
A+ SSS + G ++ L +NE + ++ N G L + + ELF+K+
Sbjct: 12 ASSSSSAAASSGMDLGSMESLCAA-INELCSEKHVSENVGELAAGI--VRKNKELFEKKS 68
Query: 571 NDVKCQLLGC 600
NDV+ LL C
Sbjct: 69 NDVEAFLLHC 78
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,803,796
Number of Sequences: 27780
Number of extensions: 309203
Number of successful extensions: 841
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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