Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5d23
         (666 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    28   0.060
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    28   0.060
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    27   0.18 
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    26   0.32 
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.0  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   3.9  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    21   6.9  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   6.9  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 28.3 bits (60), Expect = 0.060
 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
 Frame = +2

Query: 215 GFFP--GV------SVNTMYTQAQQKTILASLVGTEL-AGKYITNSQHMARGHLAAKTDF 367
           GFFP  GV      S+   +  A+    L +L+GT L +G  +          L A   F
Sbjct: 31  GFFPVQGVRGPDFRSLRFSWKSARVVYALFTLLGTFLISGFQMQKIATKGLDLLEANRLF 90

Query: 368 IFATGQRATFFFINAAPQWQPF 433
            F TG  A+  F+N A +W  F
Sbjct: 91  FFLTGVMASLLFLNLAKRWPKF 112


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 28.3 bits (60), Expect = 0.060
 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
 Frame = +2

Query: 215 GFFP--GV------SVNTMYTQAQQKTILASLVGTEL-AGKYITNSQHMARGHLAAKTDF 367
           GFFP  GV      S+   +  A+    L +L+GT L +G  +          L A   F
Sbjct: 31  GFFPVQGVRGPDFRSLRFSWKSARVVYALFTLLGTFLISGFQMQKIATKGLDLLEANRLF 90

Query: 368 IFATGQRATFFFINAAPQWQPF 433
            F TG  A+  F+N A +W  F
Sbjct: 91  FFLTGVMASLLFLNLAKRWPKF 112


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 96  HCTGHALTRTAWRFYMRGTS 155
           HC G  +TRT W F + G++
Sbjct: 327 HCLGGTITRTMWYFQICGSA 346


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 9/30 (30%), Positives = 20/30 (66%)
 Frame = +2

Query: 425 QPFNAGNWNSLEQKLRARIGEAGYNTTVYT 514
           +PF+  +  SL + ++  + E+G +T++YT
Sbjct: 256 KPFHPASTQSLSRWIKMVLAESGVDTSIYT 285


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +2

Query: 224 PGVSVNTMYTQAQQKTILASLVGTELAGKYITNSQHMARGHLAAKTDFI 370
           P V+VN    Q   KTI  + +GT+L  ++ T  + + +  +    +F+
Sbjct: 171 PFVNVNAHVAQFTLKTIAETAMGTKL--RFTTRKETIYKQSIVDMGEFL 217


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = +2

Query: 224 PGVSVNTMYTQAQQKTILASLVGTELAGKYITNSQHMARGHLAAKTDFI 370
           P ++VN    Q   KTI  + +GT+L  ++ T  + + +  +    +F+
Sbjct: 171 PFINVNAHVAQFTLKTIAETAMGTKL--RFTTRKETIYKQSIVDMGEFL 217


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = +2

Query: 59  IRVGFVINN--FFYPLYWSCFDQNRLEVLYAWYEQNPPNAVHQTGVTRPSWLAGGFFP 226
           I VG+ + +   F   +  CFD   L  LY+ YE        +T V   +++   F+P
Sbjct: 84  IEVGYDLKSPDRFVRQFTICFDDVDLNSLYSSYEITRFIRSRETDVYTHNFVKDIFYP 141


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 593 NPQIPVPLYFYKV 631
           NPQ+ VP  F+K+
Sbjct: 114 NPQLQVPRTFFKI 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,115
Number of Sequences: 336
Number of extensions: 4363
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)