Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5d18
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.57 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    25   0.75 
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    25   0.75 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.75 
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   3.0  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   3.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   5.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   5.3  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   5.3  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   9.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.3  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   9.3  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 34  EIVYILLIVSLICYLLYLIHPYWILF 111
           + V +L +V + CY +YL   Y+I +
Sbjct: 136 DYVSLLQLVFVFCYFIYLFTVYYIYY 161


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 118 IVMIYTMYTQFIVIN*HVFFFKSNVQ 195
           IV++      F+VI   +FFF +NVQ
Sbjct: 525 IVLLLMFGVSFVVIVITIFFFTANVQ 550


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 118 IVMIYTMYTQFIVIN*HVFFFKSNVQ 195
           IV++      F+VI   +FFF +NVQ
Sbjct: 250 IVLLLMFGVSFVVIVITIFFFTANVQ 275


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +1

Query: 37  IVYILLIVSLIC-YLLYLIHPYWILFLSIVMIYTMYTQFIV 156
           I++ + ++ L+C Y  Y +H   +LF    +I+TM+  F++
Sbjct: 246 ILFTVHLLLLVCIYYFYYMH---LLFCCAFIIFTMHLLFLL 283


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 263 VFSTALSACDVFTNCNYA 210
           VFS+ LS C V   C +A
Sbjct: 94  VFSSLLSCCSVIFGCIFA 111


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 263 VFSTALSACDVFTNCNYA 210
           VFS+ LS C V   C +A
Sbjct: 94  VFSSLLSCCSVIFGCIFA 111


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -3

Query: 276 YMCSRV*YSTVCVRCIHELQLCKAIVILN 190
           ++C+ V  +TVC   +  L++ +   ILN
Sbjct: 159 HICNTVISATVCFMMLLMLEIWRRFTILN 187


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/38 (23%), Positives = 16/38 (42%)
 Frame = -2

Query: 148 IVCTLYRSLQWTETISSMDVLSIISNKLRTLLKEYTLF 35
           +V T Y+   WT  + +++  + I    R     Y  F
Sbjct: 84  VVTTFYKRRTWTRLLKNLESCAKIKKTKRYCYYYYAFF 121


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -3

Query: 276 YMCSRV*YSTVCVRCIHELQLCKAIVILN 190
           ++C+ V  +TVC   +  L++ +   ILN
Sbjct: 155 HICNTVISATVCFMMLLMLEIWRRFTILN 183


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 426 KKPKVGPFFSSQLLY 382
           +KP VG F+ ++LLY
Sbjct: 277 RKPGVGVFWYARLLY 291


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 401 FQVNSYTENGQNHVNIYKKL 342
           +  N+Y E G    ++YK L
Sbjct: 346 YSKNTYNEQGNKLADLYKSL 365


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 401 FQVNSYTENGQNHVNIYKKL 342
           +  N+Y E G    ++YK L
Sbjct: 238 YSKNTYNEQGNKLADLYKSL 257


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +3

Query: 537 SSINNGGDGFECQ-HGPPECFGNLIQD 614
           S+ NN  +GF CQ +    C G  + +
Sbjct: 242 SNYNNYQEGFSCQYYQGKNCVGGKVDE 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,757
Number of Sequences: 336
Number of extensions: 4169
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)