Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5d12
         (374 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   2.4  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   2.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   4.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   4.1  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   5.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   7.2  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 14  WSLMTAPLICIK*LIIYVSFVVELFILL 97
           WS +   L     L+ YVS VV L IL+
Sbjct: 280 WSFLLFTLYSSLLLLDYVSCVVALIILI 307


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 14  WSLMTAPLICIK*LIIYVSFVVELFILL 97
           WS +   L     L+ YVS VV L IL+
Sbjct: 206 WSFLLFTLYSSLLLLDYVSCVVALIILI 233


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +3

Query: 186 NYFLGNHYRRSLTDRWSRALYQRDMRLTGNPYEVN 290
           NY+     RR   +R+ + L +  +  +G   E+N
Sbjct: 400 NYYRHKQKRRDERERYFKGLDEEKLPESGENIEIN 434


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +2

Query: 53  LIIYVSFVVELFILLEKNVV*NTTNSCNYYSFNWIAGLGTVVVS 184
           ++ Y+S  V L      +   N   +   Y+FN  A L  +VVS
Sbjct: 326 ILFYLSVFVILVYYASLDETPNPVTNGKLYNFNTFAKLLILVVS 369


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 182 TPPQSPTRQ 156
           TPPQSP +Q
Sbjct: 34  TPPQSPNQQ 42


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +2

Query: 5   NKYWSLMTAPLICIK*LIIYVSFVVELFILLEKNVV*N 118
           N +WS +    I     II +  ++ L+ ++ KN++ N
Sbjct: 230 NTFWSALYFLTIIFLFFIIPLIILLILYCIIAKNLMSN 267


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,416
Number of Sequences: 336
Number of extensions: 1689
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)