Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5d10
         (718 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.7  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    22   5.0  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    22   5.0  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   6.7  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   6.7  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   8.8  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 302 PAIFLLLIISTTIPAASRADS*PTRPAAI 216
           PA       +TT+PAAS   + P  P+A+
Sbjct: 216 PATVTTTGATTTLPAASATGTGPATPSAV 244


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic
          acetylcholine receptor alpha6subunit protein.
          Length = 529

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 78 YFVFSF*YSNSKLEQTYFLNYTIHY 4
          + +FSF  + +KL+ TYF +  I Y
Sbjct: 23 FVLFSFLRTRTKLQPTYFHHTYIIY 47


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic
          acetylcholine receptor alpha6subunit protein.
          Length = 529

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 78 YFVFSF*YSNSKLEQTYFLNYTIHY 4
          + +FSF  + +KL+ TYF +  I Y
Sbjct: 23 FVLFSFLRTRTKLQPTYFHHTYIIY 47


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 161 EILCVLAVLFTSSIFMLKAALLF 93
           EILC +AVLF +  + L +   F
Sbjct: 6   EILCGIAVLFLALYYYLTSTFDF 28


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -1

Query: 451 LIPLFS*SLCCKLHYQPLDRKEP*FQVPERWQ 356
           LI  FS     K HY   D K   FQV  +W+
Sbjct: 8   LILYFSIVCQAKAHYSLRDFKANIFQVKYQWK 39


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 291 LTSYHIYNYPCSL 253
           +TSYH  N  CSL
Sbjct: 74  ITSYHRINLKCSL 86


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.135    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,438
Number of Sequences: 438
Number of extensions: 4314
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)