Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5d09
         (313 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   0.56 
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   0.99 
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   4.0  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   4.0  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           20   6.9  

>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 0.56
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -3

Query: 185 ADDGVSN-PLTHFFKILEEVAGSCRDRSRGENNSEH 81
           AD+   N P   +F++  E  G CRD  R + NS++
Sbjct: 30  ADELCENRPADEYFRLTTE--GDCRDVVRCDKNSDN 63


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.6 bits (46), Expect = 0.99
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -1

Query: 79  KTKIFEIFILYFREIETQRTSCNE 8
           + K+ +I  +Y +E+E    +CNE
Sbjct: 148 RAKLAQIRQIYHQELEKYEQACNE 171


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 137 EEVAGSCRDRSRGENNSEHENENFRDFH 54
           + VA   RD   G  NSE+  +NF   H
Sbjct: 345 KNVAKKIRDFYYGGPNSENNLDNFYLIH 372


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 137 EEVAGSCRDRSRGENNSEHENENFRDFH 54
           + VA   RD   G  NSE+  +NF   H
Sbjct: 347 KNVAKKIRDFYYGGPNSENNLDNFYLIH 374


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 9/35 (25%), Positives = 14/35 (40%)
 Frame = -3

Query: 170 SNPLTHFFKILEEVAGSCRDRSRGENNSEHENENF 66
           +N     +K    +A  C      E+N  H NE +
Sbjct: 12  TNSFYQNYKTNPFLASDCDKNQNTEHNYTHNNEMY 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,101
Number of Sequences: 336
Number of extensions: 890
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5730534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)