Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5d09
(313 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016446-13|AAC24172.1| 349|Caenorhabditis elegans Seven tm rec... 28 1.2
Z73105-3|CAA97441.2| 205|Caenorhabditis elegans Hypothetical pr... 26 4.8
U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical pr... 26 4.8
AF119388-1|AAD31643.1| 457|Caenorhabditis elegans phenylalanine... 26 4.8
AC006631-1|AAF39793.2| 787|Caenorhabditis elegans Hypothetical ... 26 4.8
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 26 4.8
Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical pr... 26 6.4
Z74041-1|CAA98520.1| 255|Caenorhabditis elegans Hypothetical pr... 25 8.4
U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog (t... 25 8.4
AF022975-9|AAB70669.1| 344|Caenorhabditis elegans Hypothetical ... 25 8.4
>AF016446-13|AAC24172.1| 349|Caenorhabditis elegans Seven tm
receptor protein 211 protein.
Length = 349
Score = 28.3 bits (60), Expect = 1.2
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = -3
Query: 281 NIINVVTFCGI-I*ALSLSESFCFCQ--GVDCWSRADDGVSNPLTHF 150
N+I +F GI + ++S++ S F G+ CW R D S+ THF
Sbjct: 197 NVIYWPSFIGIMLDSMSINISLMFSAYFGIKCWLRMDAIFSSSSTHF 243
>Z73105-3|CAA97441.2| 205|Caenorhabditis elegans Hypothetical
protein R13.2 protein.
Length = 205
Score = 26.2 bits (55), Expect = 4.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 124 PATSSRILKKWVRGFETPSSARLQQS 201
P T R W+ G E P+S QQS
Sbjct: 22 PHTLQRDFNNWLNGIEVPNSYESQQS 47
>U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical
protein K09H11.3 protein.
Length = 1085
Score = 26.2 bits (55), Expect = 4.8
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Frame = -3
Query: 236 SLSESFCFCQGVDCWSRADDGVSNPLTHFFKILEEVAGSCRDRSRGENNSEHENE----- 72
+LS++ C R + G S PLT + E V R +GE +S+ +
Sbjct: 300 TLSDADCLSAQTASLQRREPGPSTPLTIHRRDSEAVHKIVTARKKGEQDSKKKRSASFLP 359
Query: 71 NFRDFHFVFSRNRNS 27
+FRD FS + +
Sbjct: 360 SFRDLKHRFSNMKRT 374
>AF119388-1|AAD31643.1| 457|Caenorhabditis elegans phenylalanine
hydroxylase protein.
Length = 457
Score = 26.2 bits (55), Expect = 4.8
Identities = 10/40 (25%), Positives = 24/40 (60%)
Frame = +1
Query: 121 LPATSSRILKKWVRGFETPSSARLQQSTPWQKQKLSDKDR 240
L ++ ++ ++++ TP + + + S PW QK++D D+
Sbjct: 91 LSISNKKLKRRFLFKTGTPKTKQNKDSVPWFPQKINDIDQ 130
>AC006631-1|AAF39793.2| 787|Caenorhabditis elegans Hypothetical
protein F27B3.5 protein.
Length = 787
Score = 26.2 bits (55), Expect = 4.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 109 EAVAKTIANTKTKIFEIFILYFREIETQRTSCNE 8
E V+ + TK+FE+ + RE+ET T NE
Sbjct: 526 EKVSNSRDQLSTKVFELKLQLNRELETAETLKNE 559
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 26.2 bits (55), Expect = 4.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 109 EAVAKTIANTKTKIFEIFILYFREIETQRTSCNE 8
E V+ + TK+FE+ + RE+ET T NE
Sbjct: 733 EKVSNSRDQLSTKVFELKLQLNRELETAETLKNE 766
>Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical
protein T21C9.6 protein.
Length = 1215
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 104 RGENNSEHENENFRDFHFVFSRN 36
RG +N N+N DF VFS N
Sbjct: 850 RGSDNGPLSNDNISDFANVFSNN 872
>Z74041-1|CAA98520.1| 255|Caenorhabditis elegans Hypothetical
protein T03F7.5 protein.
Length = 255
Score = 25.4 bits (53), Expect = 8.4
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 8 FVAARTLSFDFAKIQNENLENFRFRVRYCFRHGFGL 115
F R LS F+KIQ F + F +GF +
Sbjct: 54 FTIERVLSIQFSKIQRTLFFKLFFLAGFVFENGFAI 89
>U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog
(tumor suppressorgene bard1) protein 1 protein.
Length = 670
Score = 25.4 bits (53), Expect = 8.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -3
Query: 119 CRDRSRGENNSEHENENFRDFHFVFSRNRNST 24
C+D +R EN++ E + F D+ S RNST
Sbjct: 151 CKDENR-ENSNSPELDIFHDYSKEASPTRNST 181
>AF022975-9|AAB70669.1| 344|Caenorhabditis elegans Hypothetical
protein K09C6.2 protein.
Length = 344
Score = 25.4 bits (53), Expect = 8.4
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -3
Query: 218 CFCQGVDCWSRAD-DGVS-NPLTHFFKILEEVAGSCRDRSRGENNSEHENEN 69
C C G DC+S D D VS + +H + G ++ S E EN
Sbjct: 134 CCCSGSDCFSDKDLDAVSASSSSHLISEEDAEIGEKKEPSSAPTTEETGTEN 185
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,696,008
Number of Sequences: 27780
Number of extensions: 92017
Number of successful extensions: 349
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 349
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 344570176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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