Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5d08
         (772 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.7  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   4.7  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    22   6.2  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -1

Query: 223 VRDYFPELCSDLIPALTRLDVDDFPHDCTKNLEPPESNIK 104
           V D  P LC+ LI +   L  D        NL+  + N+K
Sbjct: 41  VEDIDPTLCTHLIYSFVGLGDDSRIKHLEPNLDVNQGNLK 80


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/18 (44%), Positives = 14/18 (77%), Gaps = 2/18 (11%)
 Frame = -1

Query: 517 CFFSNYIQYR--INQFSP 470
           C+++N+ QYR  I +F+P
Sbjct: 91  CYYTNWSQYRVKIGKFTP 108


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 67   FFFYMIKFSKV 99
            +FFY++KF KV
Sbjct: 1028 YFFYLVKFYKV 1038


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 67  FFFYMIKFSKV 99
           +FFY++KF KV
Sbjct: 309 YFFYLVKFYKV 319


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/37 (21%), Positives = 16/37 (43%)
 Frame = -2

Query: 762 ASLSIQYVSSVFSTNWWTDSVALYGSTTVSETFGLGT 652
           + + + +    +   +WTD    YG     ET  +G+
Sbjct: 80  SEVKMDFTLDFYFRQFWTDPRLAYGKRPGVETLSVGS 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,552
Number of Sequences: 336
Number of extensions: 4562
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)