Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5d03
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.7  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   3.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   3.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   5.3  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   5.3  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 18/65 (27%), Positives = 32/65 (49%)
 Frame = +2

Query: 17  WICQEQFLNVIPVNSYSSVEEMAELLFVPFKKSSDVDIVKPLKNLIQSTYNSAENTEDYT 196
           ++C    L VIP++ ++S E+++ L       + D+     +  L+ S   S E+   Y 
Sbjct: 279 FLCNMSLLTVIPIHVWTSKEKISFLRGFWLSPAVDMFYEFQIIELMTSVVKSLESR--YA 336

Query: 197 DALNE 211
           D LNE
Sbjct: 337 D-LNE 340


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 655 LLCLCEH*FGQCIQRFRVQIW 593
           L CLC   F  C  + RV +W
Sbjct: 218 LNCLCSLWFINCTAKGRVAVW 238



 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 236 LRWYATGSVHLRHRYNLLCS 177
           L W+  G  H+    N LCS
Sbjct: 204 LLWHTFGYYHILAMLNCLCS 223


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 655 LLCLCEH*FGQCIQRFRVQIW 593
           L CLC   F  C  + RV +W
Sbjct: 218 LNCLCSLWFINCTAKGRVAVW 238



 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 236 LRWYATGSVHLRHRYNLLCS 177
           L W+  G  H+    N LCS
Sbjct: 204 LLWHTFGYYHILAMLNCLCS 223


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 289  IIVTVNSVKRGFLEDFPNCV 230
            ++ T+N V RG+ +  P C+
Sbjct: 2181 LLRTINRVLRGYAKPDPKCI 2200


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -3

Query: 299 PPVDHSNCK*CQERFSRRLSKLRWYATGSVHLRHRY 192
           PP D+S+    Q     ++     +  GSV+ RH Y
Sbjct: 127 PPTDNSHVHHHQTSLLGKVEGAATHHLGSVYSRHPY 162


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 132 TISTSEDFLNGTNNNSAISS 73
           T STS     GTNNN++ SS
Sbjct: 173 TSSTSSTEKAGTNNNNSKSS 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,790
Number of Sequences: 336
Number of extensions: 3379
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)