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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5d03
         (679 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29561-4|CAD91697.1|  498|Caenorhabditis elegans Hypothetical pr...   183   1e-46
Z29561-3|CAD54153.1|  846|Caenorhabditis elegans Hypothetical pr...   183   1e-46
Z29561-2|CAD54152.1|  882|Caenorhabditis elegans Hypothetical pr...   183   1e-46
Z29561-1|CAA82667.2|  861|Caenorhabditis elegans Hypothetical pr...   183   1e-46
U73679-1|AAC67305.1|  861|Caenorhabditis elegans YNK1-a protein.      183   1e-46
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g...    80   2e-15
AL117201-4|CAB55064.2|  266|Caenorhabditis elegans Hypothetical ...    80   2e-15
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ...    80   2e-15
Z81476-3|CAB03922.3|  592|Caenorhabditis elegans Hypothetical pr...    32   0.43 
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr...    31   0.57 
Z71186-1|CAA94913.1|  301|Caenorhabditis elegans Hypothetical pr...    31   0.57 
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re...    31   0.57 
Z81036-5|CAB02743.2|  768|Caenorhabditis elegans Hypothetical pr...    30   1.3  
U23519-12|AAK31505.3| 1021|Caenorhabditis elegans Hypothetical p...    29   2.3  
U88311-8|AAB42341.2|  918|Caenorhabditis elegans Hypothetical pr...    29   3.0  
U41543-8|AAB37025.2|  393|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z81537-2|CAB04373.1|  682|Caenorhabditis elegans Hypothetical pr...    28   7.0  
AF039051-2|AAB94262.1|  413|Caenorhabditis elegans Nuclear hormo...    28   7.0  
Z81458-2|CAB03822.1|  386|Caenorhabditis elegans Hypothetical pr...    27   9.3  
AC024775-1|AAK68455.1|  456|Caenorhabditis elegans Hypothetical ...    27   9.3  

>Z29561-4|CAD91697.1|  498|Caenorhabditis elegans Hypothetical
           protein R10E12.1d protein.
          Length = 498

 Score =  183 bits (445), Expect = 1e-46
 Identities = 93/195 (47%), Positives = 132/195 (67%), Gaps = 5/195 (2%)
 Frame = +2

Query: 92  LFVPFKKSSDVDIVKPLKNLIQSTYNSAENTE-DYTDALNELSRLRTNAVWKVFEK--TS 262
           L  P K +++VD+VKPL + I + YN+++N   D  +A+ EL++LR+ A  +  +K  ++
Sbjct: 7   LSAPLKSTNEVDLVKPLTSYIDNVYNTSDNNRSDVAEAVQELNKLRSKACCQPLDKHQSA 66

Query: 263 LDTIYSYYDQLVALESKIPPQEVQIP--FKWKDAFDKGSIFGGRMSLTISSLEYERMCIL 436
           LD +  YYDQLVA+E+KI     Q P  FKWKDAFDKGS+F  R SL++S   +ER  +L
Sbjct: 67  LDVLTRYYDQLVAIENKIIISATQNPVVFKWKDAFDKGSLFSSRASLSLSDGSFERAAVL 126

Query: 437 FNIAAMQSMIAAQEPLDTEDSLKLAAKYFQQSAGIFVYLKANIMMAVHQETTPDLNPETL 616
           FNI ++ S I A +   T+D +K++AK FQQSAG+F  L+  ++  V QE TPDL P+TL
Sbjct: 127 FNIGSLMSQIGAAQQFHTDDEIKVSAKLFQQSAGVFARLRDVVLGMVQQEPTPDLMPDTL 186

Query: 617 DALAKLMLAQAQEVI 661
            AL+ LM AQAQE I
Sbjct: 187 AALSALMTAQAQEAI 201


>Z29561-3|CAD54153.1|  846|Caenorhabditis elegans Hypothetical
           protein R10E12.1c protein.
          Length = 846

 Score =  183 bits (445), Expect = 1e-46
 Identities = 93/195 (47%), Positives = 132/195 (67%), Gaps = 5/195 (2%)
 Frame = +2

Query: 92  LFVPFKKSSDVDIVKPLKNLIQSTYNSAENTE-DYTDALNELSRLRTNAVWKVFEK--TS 262
           L  P K +++VD+VKPL + I + YN+++N   D  +A+ EL++LR+ A  +  +K  ++
Sbjct: 7   LSAPLKSTNEVDLVKPLTSYIDNVYNTSDNNRSDVAEAVQELNKLRSKACCQPLDKHQSA 66

Query: 263 LDTIYSYYDQLVALESKIPPQEVQIP--FKWKDAFDKGSIFGGRMSLTISSLEYERMCIL 436
           LD +  YYDQLVA+E+KI     Q P  FKWKDAFDKGS+F  R SL++S   +ER  +L
Sbjct: 67  LDVLTRYYDQLVAIENKIIISATQNPVVFKWKDAFDKGSLFSSRASLSLSDGSFERAAVL 126

Query: 437 FNIAAMQSMIAAQEPLDTEDSLKLAAKYFQQSAGIFVYLKANIMMAVHQETTPDLNPETL 616
           FNI ++ S I A +   T+D +K++AK FQQSAG+F  L+  ++  V QE TPDL P+TL
Sbjct: 127 FNIGSLMSQIGAAQQFHTDDEIKVSAKLFQQSAGVFARLRDVVLGMVQQEPTPDLMPDTL 186

Query: 617 DALAKLMLAQAQEVI 661
            AL+ LM AQAQE I
Sbjct: 187 AALSALMTAQAQEAI 201


>Z29561-2|CAD54152.1|  882|Caenorhabditis elegans Hypothetical
           protein R10E12.1b protein.
          Length = 882

 Score =  183 bits (445), Expect = 1e-46
 Identities = 93/195 (47%), Positives = 132/195 (67%), Gaps = 5/195 (2%)
 Frame = +2

Query: 92  LFVPFKKSSDVDIVKPLKNLIQSTYNSAENTE-DYTDALNELSRLRTNAVWKVFEK--TS 262
           L  P K +++VD+VKPL + I + YN+++N   D  +A+ EL++LR+ A  +  +K  ++
Sbjct: 7   LSAPLKSTNEVDLVKPLTSYIDNVYNTSDNNRSDVAEAVQELNKLRSKACCQPLDKHQSA 66

Query: 263 LDTIYSYYDQLVALESKIPPQEVQIP--FKWKDAFDKGSIFGGRMSLTISSLEYERMCIL 436
           LD +  YYDQLVA+E+KI     Q P  FKWKDAFDKGS+F  R SL++S   +ER  +L
Sbjct: 67  LDVLTRYYDQLVAIENKIIISATQNPVVFKWKDAFDKGSLFSSRASLSLSDGSFERAAVL 126

Query: 437 FNIAAMQSMIAAQEPLDTEDSLKLAAKYFQQSAGIFVYLKANIMMAVHQETTPDLNPETL 616
           FNI ++ S I A +   T+D +K++AK FQQSAG+F  L+  ++  V QE TPDL P+TL
Sbjct: 127 FNIGSLMSQIGAAQQFHTDDEIKVSAKLFQQSAGVFARLRDVVLGMVQQEPTPDLMPDTL 186

Query: 617 DALAKLMLAQAQEVI 661
            AL+ LM AQAQE I
Sbjct: 187 AALSALMTAQAQEAI 201


>Z29561-1|CAA82667.2|  861|Caenorhabditis elegans Hypothetical
           protein R10E12.1a protein.
          Length = 861

 Score =  183 bits (445), Expect = 1e-46
 Identities = 93/195 (47%), Positives = 132/195 (67%), Gaps = 5/195 (2%)
 Frame = +2

Query: 92  LFVPFKKSSDVDIVKPLKNLIQSTYNSAENTE-DYTDALNELSRLRTNAVWKVFEK--TS 262
           L  P K +++VD+VKPL + I + YN+++N   D  +A+ EL++LR+ A  +  +K  ++
Sbjct: 7   LSAPLKSTNEVDLVKPLTSYIDNVYNTSDNNRSDVAEAVQELNKLRSKACCQPLDKHQSA 66

Query: 263 LDTIYSYYDQLVALESKIPPQEVQIP--FKWKDAFDKGSIFGGRMSLTISSLEYERMCIL 436
           LD +  YYDQLVA+E+KI     Q P  FKWKDAFDKGS+F  R SL++S   +ER  +L
Sbjct: 67  LDVLTRYYDQLVAIENKIIISATQNPVVFKWKDAFDKGSLFSSRASLSLSDGSFERAAVL 126

Query: 437 FNIAAMQSMIAAQEPLDTEDSLKLAAKYFQQSAGIFVYLKANIMMAVHQETTPDLNPETL 616
           FNI ++ S I A +   T+D +K++AK FQQSAG+F  L+  ++  V QE TPDL P+TL
Sbjct: 127 FNIGSLMSQIGAAQQFHTDDEIKVSAKLFQQSAGVFARLRDVVLGMVQQEPTPDLMPDTL 186

Query: 617 DALAKLMLAQAQEVI 661
            AL+ LM AQAQE I
Sbjct: 187 AALSALMTAQAQEAI 201


>U73679-1|AAC67305.1|  861|Caenorhabditis elegans YNK1-a protein.
          Length = 861

 Score =  183 bits (445), Expect = 1e-46
 Identities = 93/195 (47%), Positives = 132/195 (67%), Gaps = 5/195 (2%)
 Frame = +2

Query: 92  LFVPFKKSSDVDIVKPLKNLIQSTYNSAENTE-DYTDALNELSRLRTNAVWKVFEK--TS 262
           L  P K +++VD+VKPL + I + YN+++N   D  +A+ EL++LR+ A  +  +K  ++
Sbjct: 7   LSAPLKSTNEVDLVKPLTSYIDNVYNTSDNNRSDVAEAVQELNKLRSKACCQPLDKHQSA 66

Query: 263 LDTIYSYYDQLVALESKIPPQEVQIP--FKWKDAFDKGSIFGGRMSLTISSLEYERMCIL 436
           LD +  YYDQLVA+E+KI     Q P  FKWKDAFDKGS+F  R SL++S   +ER  +L
Sbjct: 67  LDVLTRYYDQLVAIENKIIISATQNPVVFKWKDAFDKGSLFSSRASLSLSDGSFERAAVL 126

Query: 437 FNIAAMQSMIAAQEPLDTEDSLKLAAKYFQQSAGIFVYLKANIMMAVHQETTPDLNPETL 616
           FNI ++ S I A +   T+D +K++AK FQQSAG+F  L+  ++  V QE TPDL P+TL
Sbjct: 127 FNIGSLMSQIGAAQQFHTDDEIKVSAKLFQQSAGVFARLRDVVLGMVQQEPTPDLMPDTL 186

Query: 617 DALAKLMLAQAQEVI 661
            AL+ LM AQAQE I
Sbjct: 187 AALSALMTAQAQEAI 201


>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of
           glp-1 protein.
          Length = 1492

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 3/182 (1%)
 Frame = +2

Query: 140 LKNLIQSTYNSAENTEDYTDALNELSRLRTNAVWKVFEKTSLDTIYSYYDQLVALESKIP 319
           +K  I  T+N+  +  DY  A +EL++++  A            +  YY QL  ++ + P
Sbjct: 33  MKEYILLTFNA--DPHDYDSAFDELTQMKFEANVPTPSVEQTLKLKRYYGQLCMMQKRFP 90

Query: 320 P---QEVQIPFKWKDAFDKGSIFGGRMSLTISSLEYERMCILFNIAAMQSMIAAQEPLDT 490
               ++++ PF W D      I   +  +TI  +E+E+  ++FNI A  +  AA++  DT
Sbjct: 91  MGAGEQLETPFAWHDGLI--DIRSAQSEVTICDIEFEKASVMFNIGACHAQYAAEQTRDT 148

Query: 491 EDSLKLAAKYFQQSAGIFVYLKANIMMAVHQETTPDLNPETLDALAKLMLAQAQEVIAHK 670
           +D +K A  +FQ +A  F  L +     +   +  DL+   +    K+M+AQAQE +  K
Sbjct: 149 QDCIKAAFMHFQYAAYAFEQLNSFRNSDIFYPSV-DLDANVISFYYKVMIAQAQECLVQK 207

Query: 671 CI 676
            +
Sbjct: 208 SL 209


>AL117201-4|CAB55064.2|  266|Caenorhabditis elegans Hypothetical
           protein Y53H1C.2b protein.
          Length = 266

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 3/182 (1%)
 Frame = +2

Query: 140 LKNLIQSTYNSAENTEDYTDALNELSRLRTNAVWKVFEKTSLDTIYSYYDQLVALESKIP 319
           +K  I  T+N+  +  DY  A +EL++++  A            +  YY QL  ++ + P
Sbjct: 33  MKEYILLTFNA--DPHDYDSAFDELTQMKFEANVPTPSVEQTLKLKRYYGQLCMMQKRFP 90

Query: 320 P---QEVQIPFKWKDAFDKGSIFGGRMSLTISSLEYERMCILFNIAAMQSMIAAQEPLDT 490
               ++++ PF W D      I   +  +TI  +E+E+  ++FNI A  +  AA++  DT
Sbjct: 91  MGAGEQLETPFAWHDGLI--DIRSAQSEVTICDIEFEKASVMFNIGACHAQYAAEQTRDT 148

Query: 491 EDSLKLAAKYFQQSAGIFVYLKANIMMAVHQETTPDLNPETLDALAKLMLAQAQEVIAHK 670
           +D +K A  +FQ +A  F  L +     +   +  DL+   +    K+M+AQAQE +  K
Sbjct: 149 QDCIKAAFMHFQYAAYAFEQLNSFRNSDIFYPSV-DLDANVISFYYKVMIAQAQECLVQK 207

Query: 671 CI 676
            +
Sbjct: 208 SL 209


>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
           protein Y53H1C.2a protein.
          Length = 1512

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 3/182 (1%)
 Frame = +2

Query: 140 LKNLIQSTYNSAENTEDYTDALNELSRLRTNAVWKVFEKTSLDTIYSYYDQLVALESKIP 319
           +K  I  T+N+  +  DY  A +EL++++  A            +  YY QL  ++ + P
Sbjct: 33  MKEYILLTFNA--DPHDYDSAFDELTQMKFEANVPTPSVEQTLKLKRYYGQLCMMQKRFP 90

Query: 320 P---QEVQIPFKWKDAFDKGSIFGGRMSLTISSLEYERMCILFNIAAMQSMIAAQEPLDT 490
               ++++ PF W D      I   +  +TI  +E+E+  ++FNI A  +  AA++  DT
Sbjct: 91  MGAGEQLETPFAWHDGLI--DIRSAQSEVTICDIEFEKASVMFNIGACHAQYAAEQTRDT 148

Query: 491 EDSLKLAAKYFQQSAGIFVYLKANIMMAVHQETTPDLNPETLDALAKLMLAQAQEVIAHK 670
           +D +K A  +FQ +A  F  L +     +   +  DL+   +    K+M+AQAQE +  K
Sbjct: 149 QDCIKAAFMHFQYAAYAFEQLNSFRNSDIFYPSV-DLDANVISFYYKVMIAQAQECLVQK 207

Query: 671 CI 676
            +
Sbjct: 208 SL 209


>Z81476-3|CAB03922.3|  592|Caenorhabditis elegans Hypothetical
           protein C25F9.4 protein.
          Length = 592

 Score = 31.9 bits (69), Expect = 0.43
 Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
 Frame = +2

Query: 47  IPVNSYSSVEEMAELLFVPFKKSSDVDIVKPLKNLIQSTYNSAENTEDY----TDALNEL 214
           I   S   +EEM +     FK +SDV ++  +K  + + +N +++ +D       A+  +
Sbjct: 491 ICAESDEDIEEMYDSFCAGFKNTSDVGLI--MKIWVDAHFNFSKSEQDRCFIGKTAMKNI 548

Query: 215 SRLRTNAVWKVFEKTSLDTIYSYYDQLVALES-KIPPQEVQ 334
                 A+ K+ EK +  +I   Y+Q+ A  S K P +EV+
Sbjct: 549 IENFEKAI-KIIEKATQTSIEESYNQMRAARSGKRPIEEVK 588


>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
            F29D11.1 protein.
          Length = 4753

 Score = 31.5 bits (68), Expect = 0.57
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = +1

Query: 424  NVHLIQHSSY---AEHDCSSGTSRH*GFTQASCQ-IFSAISWHLCIPEGEHHDGS 576
            N H I HS++    ++DC  G+  H   T +SCQ  F   + H C+P     DG+
Sbjct: 3109 NQHCI-HSTWECDGDNDCLDGSDEHANCTYSSCQPDFFQCANHKCVPNSWKCDGN 3162


>Z71186-1|CAA94913.1|  301|Caenorhabditis elegans Hypothetical
           protein F23D12.1 protein.
          Length = 301

 Score = 31.5 bits (68), Expect = 0.57
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +2

Query: 290 QLVALESKIPPQEVQIPFKWKDAFDK 367
           QLVAL +++P ++V I F WK+  D+
Sbjct: 232 QLVALATEVPLKDVGITFSWKEVLDE 257


>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
            protein protein.
          Length = 4753

 Score = 31.5 bits (68), Expect = 0.57
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = +1

Query: 424  NVHLIQHSSY---AEHDCSSGTSRH*GFTQASCQ-IFSAISWHLCIPEGEHHDGS 576
            N H I HS++    ++DC  G+  H   T +SCQ  F   + H C+P     DG+
Sbjct: 3109 NQHCI-HSTWECDGDNDCLDGSDEHANCTYSSCQPDFFQCANHKCVPNSWKCDGN 3162


>Z81036-5|CAB02743.2|  768|Caenorhabditis elegans Hypothetical
           protein C16C2.3a protein.
          Length = 768

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/39 (35%), Positives = 25/39 (64%)
 Frame = +3

Query: 234 QFGKSSRKPLLTLFTVTMINWWPLRARFLLKKFKFHSNG 350
           Q G  S +P++++ T+T+ +  P+RA F LK  K + +G
Sbjct: 383 QVGLESIRPMVSIDTITISDHKPVRAMFNLKVKKINESG 421


>U23519-12|AAK31505.3| 1021|Caenorhabditis elegans Hypothetical
           protein F26G1.1 protein.
          Length = 1021

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
 Frame = +2

Query: 74  EEMAELLFVPFKKS---SDVDIVKP-LKNLIQSTYNSAENTEDYTDALNELSRLRTNAVW 241
           E+ A++  V   K    S +D+++  LK+L  S   + +N +   D       LR N + 
Sbjct: 207 EKRAQIALVAKPKEFGMSQIDVLRARLKSL--SDEKNLKNVKKAGDVSQRFLILRENLIT 264

Query: 242 KVFEKTSLDTIYSYYDQLVALESKIPPQEVQIPFKWKDAFDKGSIFG 382
               +  +++     +    L+S IPPQ  + P+ W  A D    FG
Sbjct: 265 AWGREDRVESFKIVIESANLLQS-IPPQSEEYPYYWLLAIDVVDTFG 310


>U88311-8|AAB42341.2|  918|Caenorhabditis elegans Hypothetical
           protein C10H11.1 protein.
          Length = 918

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = +2

Query: 104 FKKSSDVDIVKPLKNLIQSTYNSAENTEDYTDALNELSRLRTNAVWKVFEKTSL 265
           F  SSD+  +KPL+  +    NS E +    D LN  S LR++A +   EK  L
Sbjct: 632 FMVSSDISEMKPLRRYVVIGANSRETSLREIDDLN--SPLRSHAAYIEVEKDIL 683


>U41543-8|AAB37025.2|  393|Caenorhabditis elegans Hypothetical
           protein F46H5.8 protein.
          Length = 393

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +2

Query: 110 KSSDVDIVKPLKNLIQSTY 166
           K +D D+V+P KNLI+ TY
Sbjct: 368 KITDADMVEPWKNLIEETY 386


>Z81537-2|CAB04373.1|  682|Caenorhabditis elegans Hypothetical
           protein F41D3.2 protein.
          Length = 682

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 35  FLNVIPVNSYSSVEEMAELLFVPFKKSSDVDIVKPL 142
           + N +  +SYSS+  +  L F+PF  SS   I++PL
Sbjct: 246 YFNNVQASSYSSLAVLIILTFLPFTLSS--SIIRPL 279


>AF039051-2|AAB94262.1|  413|Caenorhabditis elegans Nuclear hormone
           receptor familyprotein 155 protein.
          Length = 413

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = +2

Query: 104 FKKSSDVDIVKPLKNLIQSTY--NSAENTEDYTDALNELS 217
           + K  ++ IV+    L+Q+T   NSA+   D +D LN+LS
Sbjct: 211 YVKQVEMSIVQKQLCLVQNTLLVNSADELRDLSDVLNDLS 250


>Z81458-2|CAB03822.1|  386|Caenorhabditis elegans Hypothetical
           protein C03E10.3 protein.
          Length = 386

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -1

Query: 196 GIIFCVLGTVVSRLY*ILQRFNNINVRRLFKRHKQQFSHFFDRRIGIY 53
           G  F  +  ++     I ++F N+NV   F  +   F +F D  IG+Y
Sbjct: 58  GTFFMAICKLIPDTEEIQRKFENVNVTMGFIINFTTFFYFLDAHIGLY 105


>AC024775-1|AAK68455.1|  456|Caenorhabditis elegans Hypothetical
           protein Y41D4A.5 protein.
          Length = 456

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 373 YLWRQDESHNQFIGI*KNVHLIQHSSYAEHDCSSG 477
           YL R  +  NQ  G  + VH + +  + +H C SG
Sbjct: 229 YLMRCLKMENQTTGECRKVHQLHYREWPDHGCPSG 263


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,687,457
Number of Sequences: 27780
Number of extensions: 330575
Number of successful extensions: 925
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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