Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5d02
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    25   0.57 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   1.8  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   3.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.3  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   9.3  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -1

Query: 418 VSILLGVWLLSFVVSSQVDIVLDPTLVLTFWSAAF 314
           + I++ ++ +S  + S   I+ D  ++LTFWSA F
Sbjct: 246 IFIVVSIFYMSAYLISN-PIMWDRVMLLTFWSAFF 279


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 84  NTYINHLIDMSTRNNTKTE 140
           N YI H I++   N+ KTE
Sbjct: 302 NYYIAHFINIDPENHNKTE 320


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -1

Query: 559 RLMNLTTLYILVRSLSDISVLVIGTLTDLPF 467
           R+ N    YI++  L +++V V+  +   PF
Sbjct: 76  RMKNPIVKYIILIDLGEVAVTVLAGILTTPF 106


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +3

Query: 123 NNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKR 248
           +N   E+     DTK I+      D+   KY    GD S +R
Sbjct: 693 DNNLYERVTSLKDTKAILSLGGWTDSAGDKYSRLVGDGSARR 734


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 273 LDLKFSTSLFYRMNRPDPANTSSAL 199
           LD+     +F ++ RP    TS AL
Sbjct: 313 LDITEPVKVFIQLRRPSDGATSEAL 337


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,973
Number of Sequences: 336
Number of extensions: 2552
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)