Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5d02
(682 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22F8.09 |rrp16|nop53|rRNA processing protein Rrp16 |Schizosa... 42 1e-04
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 33 0.050
SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|ch... 31 0.12
SPAC3C7.13c |||glucose-6-phosphate 1-dehydrogenase |Schizosaccha... 29 0.47
SPBC19C2.11c |||mitochondrial outer membrane protein |Schizosacc... 29 0.47
SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain pro... 29 0.82
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 29 0.82
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 28 1.1
SPCC1682.03c |mug174||meiotically upregulated gene Mug174|Schizo... 28 1.4
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 1.9
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 1.9
SPCC70.09c |mug9||conserved fungal protein|Schizosaccharomyces p... 27 2.5
SPBC8D2.02c |||vacuolar sorting protein Vps68|Schizosaccharomyce... 27 3.3
SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c... 26 4.4
SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces pomb... 26 4.4
SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor Atf1|Sch... 26 5.8
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 26 5.8
SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 26 5.8
SPAC24H6.11c |||sulfate transporter |Schizosaccharomyces pombe|c... 26 5.8
SPAC11E3.14 |||conserved protein|Schizosaccharomyces pombe|chr 1... 25 7.7
>SPAC22F8.09 |rrp16|nop53|rRNA processing protein Rrp16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 419
Score = 41.5 bits (93), Expect = 1e-04
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Frame = +3
Query: 183 YNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRER-YTIRLKAADQNVNTSVGSKT 359
YN D A K L +G K+E+ RI +L E++RI+++ + + +DQ+VN S+ S
Sbjct: 195 YNPDAAAWMKLLDTKGSEELKKEQKRISELEEKERIQKKAFEDKGLVSDQDVNHSIDSDD 254
Query: 360 ISTCED------TTKDKSQTPS---KIDTESISAKGLCENDESIKKGRSV-KVPITSTLI 509
S E ++K+K +T S KI L E ++ + R++ K P S +
Sbjct: 255 QSEHEQAETPIPSSKNKRKTRSQRNKIRQRREEELRLLEQKKNEELLRTIDKAPAISKKL 314
Query: 510 SDNDRTRIYKVVRFINRKPQKGSIQIDLTSRAKKTSKY 623
D K +F N+ + +I L + KK K+
Sbjct: 315 QQKD-----KAEKFSNKAVSSSTTEIKL--KKKKFGKH 345
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 32.7 bits (71), Expect = 0.050
Identities = 23/84 (27%), Positives = 41/84 (48%)
Frame = +3
Query: 267 DLAERKRIRERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLC 446
D+++ K ++ IR A +S S + + DTT+ ++ T S+ T SIS+
Sbjct: 319 DVSDEKETEAKHEIRAPAIIVRETSSHPSTAVPSENDTTESENDTLSESSTTSISSSP-S 377
Query: 447 ENDESIKKGRSVKVPITSTLISDN 518
EN ++ V P +L++DN
Sbjct: 378 ENSDTSDDLTKVDSP-NKSLVNDN 400
>SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 752
Score = 31.5 bits (68), Expect = 0.12
Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 7/168 (4%)
Frame = +3
Query: 180 KYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRERYTIRLKAADQNVNTSVG--- 350
K+N + GD E+ +++ E K + + K + V++ V
Sbjct: 574 KHNSQNFASPMQTDAEGDIVQNEEEKESVEVEEGKHKNDLPKVSPKPPTEGVDSEVNGES 633
Query: 351 ----SKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDN 518
+K + + +D T + S+ PS + + L +ND+ + + I S IS+
Sbjct: 634 LVQVNKVLKSEDDNTSEASKDPSSHVKSPENIEKLKQNDDHFEVTEEITSTINSK-ISEK 692
Query: 519 DRTRIYKVVRFINRKPQKGSIQIDLTSRAKKTSKYTETERREAKRPPE 662
+ + + + P+ + KK + E E + P+
Sbjct: 693 QENNVAETILEVTSSPKSSENSQKQSEITKKRGRDEEDEPSDLHSSPK 740
>SPAC3C7.13c |||glucose-6-phosphate 1-dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 473
Score = 29.5 bits (63), Expect = 0.47
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +3
Query: 456 ESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGSIQIDLTSRAKKTSKYTETE 635
E + K STL DNDR + V ++ +KG + I R K + +++ +
Sbjct: 297 EGVPKDSKATTFAASTLHVDNDRWKGVPFVFVSGKRMKKGEVYIKYYFRLKDSGIFSDVK 356
Query: 636 RR 641
RR
Sbjct: 357 RR 358
>SPBC19C2.11c |||mitochondrial outer membrane protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 29.5 bits (63), Expect = 0.47
Identities = 16/51 (31%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Frame = +3
Query: 279 RKRIRERYTIRL-KAADQNVNTS---VGSKTISTCEDTTKDKSQTPSKIDT 419
R+R+++R+ I++ +A++++ ++S VGSK + E TP+KI T
Sbjct: 347 RERVKKRHVIKIHEASNKSASSSETFVGSKNVDLTESAFDSIPDTPTKIIT 397
>SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 240
Score = 28.7 bits (61), Expect = 0.82
Identities = 26/98 (26%), Positives = 47/98 (47%)
Frame = +3
Query: 105 IDMSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERK 284
I+M+ ++TKT ++ +T++ I K + ++ Q R + +K+EK RIL L E+K
Sbjct: 15 IEMAEFHSTKTSH-DQFEETEEEIKKRSPEELKQAIEAL-REKAKEKKEKERILALEEKK 72
Query: 285 RIRERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQ 398
Y I K+ D+ + + D K + Q
Sbjct: 73 ---TNYKILQKSNDETAQAMRKMQDQARLRDLQKIRQQ 107
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 28.7 bits (61), Expect = 0.82
Identities = 22/113 (19%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Frame = +3
Query: 135 TEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRERYTIRL 314
T+ +NE + K D+++ ++ DS + +K + E ++ + T +
Sbjct: 444 TKITNEDTGKTETDVKAKETDSIEANDKDEKTDSKETEDKVEETESKEAD-VKAKETDSI 502
Query: 315 KAADQNVNTSVGSKTISTCEDT-TKDKSQTPSKIDTESISAKGLCENDESIKK 470
+ D+ T +T E T +KD ++ P+K D + + K + + +K+
Sbjct: 503 EVDDKEEKTD-SKETADKVEQTDSKDTNEKPAKDDNKEANEKAEKVDSKDVKE 554
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 28.3 bits (60), Expect = 1.1
Identities = 39/156 (25%), Positives = 58/156 (37%), Gaps = 5/156 (3%)
Frame = +3
Query: 114 STRNNTKTEKSNESGDTKKIIDKYNR----DDAVQTKYL-PDRGDSSDKREKSRILDLAE 278
ST + +N S + K++R DDA T L P R +K K LA
Sbjct: 240 STGGSETGGAANSSSTSNPSSAKWSRFTVYDDASHTHQLRPAR--RQEKLGKMLKDFLAG 297
Query: 279 RKRIRERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDE 458
+ RE I +AAD S+ I+ + P+K+ + G C+ E
Sbjct: 298 NSKKREEERIAKEAADAQHQLSLVQSWINGYGQEKLADKKDPAKVSASFVEKYGRCQ--E 355
Query: 459 SIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKP 566
I +G V I + N + V+ RKP
Sbjct: 356 VIGRGAFGVVRIAHKVDPQNSGSETLYAVKEFRRKP 391
>SPCC1682.03c |mug174||meiotically upregulated gene
Mug174|Schizosaccharomyces pombe|chr 3|||Manual
Length = 626
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 399 TPSKIDTESISAKGLCENDES-IKKGRSVKVPITSTLISDN 518
+PSK+ +E+ CEN E ++G++ P++ ++ S+N
Sbjct: 369 SPSKLSSETTKVHRGCENTEKPSEEGKNFTTPLSDSVESEN 409
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 27.5 bits (58), Expect = 1.9
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = +3
Query: 222 DRGDSSDKREKSRILDL--AERKRIRERYTIRLKAADQNVNTSVGSKTISTC-EDTTKDK 392
D DS R++S+ +D A K+ ++ + N V + S+ ED
Sbjct: 1314 DSSDSGKSRKRSQSVDSEDAGSKKPVKKIAASASGRGRKTNKPVATTIFSSDDEDDLLPS 1373
Query: 393 SQTPSKIDTESISAKGLCENDESIKK 470
S PS I + SAK + S+KK
Sbjct: 1374 SLKPSTITSTKASAKNKGKKASSVKK 1399
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 27.5 bits (58), Expect = 1.9
Identities = 24/126 (19%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Frame = +3
Query: 90 YINHLIDMSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILD 269
+IN + +S + + K+NE K+ + N A Q + + + + +R ++ +
Sbjct: 471 HINKVEIVSDSSESFAHKNNEKRFDKEASGRINDLRAEQQQIMLEARQKAIERRRNEEEE 530
Query: 270 LAERKRIRERYTIRLKAADQNVNTS--VGSKTISTCEDTTKDKSQTPSKIDTESISAKGL 443
LA + + +K + +N+S + ++ S E + K ++ + + + S +GL
Sbjct: 531 LARSRERARKKAEEIKISSSKMNSSPTITNERSSNVESSKKVEAIYTKEPQSITNSPEGL 590
Query: 444 CENDES 461
N E+
Sbjct: 591 HSNQET 596
>SPCC70.09c |mug9||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 208
Score = 27.1 bits (57), Expect = 2.5
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +3
Query: 303 TIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESIKKGRSV 482
+++ + + N N+ K E T KSQ+PS + ++ L S+K S+
Sbjct: 95 SLKRENKEVNANSKPPVKQQEVIESTVISKSQSPS-VKQLKLTESTLLAPSSSLKPSVSL 153
Query: 483 KVPITSTLI 509
K I+S L+
Sbjct: 154 KKDISSNLL 162
>SPBC8D2.02c |||vacuolar sorting protein Vps68|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 170
Score = 26.6 bits (56), Expect = 3.3
Identities = 24/92 (26%), Positives = 42/92 (45%)
Frame = -1
Query: 463 IDSSFSQSPFAEIDSVSILLGVWLLSFVVSSQVDIVLDPTLVLTFWSAAFNLMVYLSLMR 284
+DSS + + + S LGV+ + +S V + +D L F A + ++ +
Sbjct: 4 LDSSIFRFRLSSLHVSSRSLGVYFAGIMFASAVWVFVDAALYSAFDYARNLHITFIDWIP 63
Query: 283 FLSARSKILDFSLLSDESPRSGKYFVCTASSL 188
FL + I+ + + D+S SG F T SL
Sbjct: 64 FLCSILGIVIVNSI-DKSRLSGDSFAYTDESL 94
>SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 26.2 bits (55), Expect = 4.4
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 126 NTKTEKSNESGDTK-KIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIR 293
N ++KSN++GD K K + K N A D + + ++ + D+ KR++
Sbjct: 183 NKASKKSNKNGDKKRKHVSKSNSKHAKHELRTNRMLDGENVKSETSVTDMERVKRVK 239
>SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 730
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +3
Query: 111 MSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKRE 251
+S ++T ++ ++ DT+K +Y RD+A++ K + + G S E
Sbjct: 6 LSVVSSTASDTASHVSDTRK--RQYQRDEALRKKIISELGKKSGNFE 50
>SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor
Atf1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 25.8 bits (54), Expect = 5.8
Identities = 18/64 (28%), Positives = 25/64 (39%)
Frame = +3
Query: 108 DMSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKR 287
D ST + +N+S T I K + + A T Y S +R D +RK
Sbjct: 422 DYSTSQEPSSNANNQSSPTSSINGKASSESANGTSY----SKGSSRRNSKNETDEEKRKS 477
Query: 288 IRER 299
ER
Sbjct: 478 FLER 481
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 25.8 bits (54), Expect = 5.8
Identities = 13/63 (20%), Positives = 35/63 (55%)
Frame = +3
Query: 240 DKREKSRILDLAERKRIRERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDT 419
+++ K R+L +++ K R+ YT + D+ ++ ++ +++ + TT + TP++ T
Sbjct: 462 EQQNKKRLLLVSQEKE-RKGYTSA--SPDRPLSQTITESSVAKTKSTTPKSTDTPTEATT 518
Query: 420 ESI 428
+
Sbjct: 519 SPV 521
>SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 233
Score = 25.8 bits (54), Expect = 5.8
Identities = 23/85 (27%), Positives = 35/85 (41%)
Frame = +3
Query: 210 KYLPDRGDSSDKREKSRILDLAERKRIRERYTIRLKAADQNVNTSVGSKTISTCEDTTKD 389
K L R DK KS+ L+ E+K ++ + KAAD+ + K ++ D K
Sbjct: 11 KSLEYRSKKFDK--KSQSLEEHEKKVQQKNEELEKKAADKISRDELPEKQLAQSNDKDKH 68
Query: 390 KSQTPSKIDTESISAKGLCENDESI 464
P +S KG ND +
Sbjct: 69 SVSNPPHKTLKSKRQKGK-NNDRKV 92
>SPAC24H6.11c |||sulfate transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 958
Score = 25.8 bits (54), Expect = 5.8
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = -1
Query: 520 SLSDISVLVIGTLTDLPFFIDSSFSQSPFAEIDSVSILLG--VWLLSFVVSSQVDIVLDP 347
SLS+ ++ + + +LPFF + ++ + AE+DS +L W S + +++ +
Sbjct: 875 SLSE-NITCLCVVGELPFFSKTCYNATVVAELDSAVWILDREGWETMLKSSDKAEVIENE 933
Query: 346 TLVLT 332
L LT
Sbjct: 934 MLYLT 938
>SPAC11E3.14 |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 588
Score = 25.4 bits (53), Expect = 7.7
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 610 FFARDVKSIWILPFCGFRLMNL 545
+ +RD + +WILPF + L L
Sbjct: 520 YLSRDNRELWILPFAYYELAAL 541
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,463,819
Number of Sequences: 5004
Number of extensions: 46714
Number of successful extensions: 162
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -