Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5d02
(682 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3481| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1) 35 0.053
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.093
SB_24402| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_11602| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17) 32 0.49
SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051) 31 0.65
SB_51776| Best HMM Match : S-antigen (HMM E-Value=0.24) 31 0.86
SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37) 31 1.1
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 31 1.1
SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41) 30 1.5
SB_6112| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_45915| Best HMM Match : CRAM_rpt (HMM E-Value=9.1e-20) 30 2.0
SB_41880| Best HMM Match : TolA (HMM E-Value=2.2) 30 2.0
SB_5737| Best HMM Match : DED (HMM E-Value=2.9e-18) 30 2.0
SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_33494| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71) 29 2.6
SB_34096| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_39590| Best HMM Match : PHD (HMM E-Value=2.2e-18) 29 3.5
SB_21939| Best HMM Match : F-box (HMM E-Value=0.001) 29 3.5
SB_33873| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_44267| Best HMM Match : DUF602 (HMM E-Value=1.1e-29) 29 4.6
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 29 4.6
SB_21312| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_3218| Best HMM Match : Ribosomal_S25 (HMM E-Value=0.65) 29 4.6
SB_52215| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_29494| Best HMM Match : Mpp10 (HMM E-Value=0.62) 28 6.1
SB_29635| Best HMM Match : E-MAP-115 (HMM E-Value=1.2) 28 6.1
SB_21536| Best HMM Match : RVT_1 (HMM E-Value=0.0043) 28 6.1
SB_35169| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_3481| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1)
Length = 1347
Score = 35.1 bits (77), Expect = 0.053
Identities = 23/106 (21%), Positives = 49/106 (46%)
Frame = +3
Query: 117 TRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRE 296
T+N T+ K+ +S T+K+ + D + K+ + D++ ++ +++E +
Sbjct: 164 TKNMTQ-RKTFQSSSTRKLSFENKTKDLSKVKFGETSTNKLDEQPSKKLNNISEGLLTEQ 222
Query: 297 RYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISA 434
+K +N + + G T S EDT + P+KI I++
Sbjct: 223 TKKTSVKLCFENNSNNTGINTCSVREDTQEITVLAPAKISKSKITS 268
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 34.3 bits (75), Expect = 0.093
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Frame = +3
Query: 108 DMSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKS-RILDLAERK 284
D S R + + NE+G+TK+ K ++D + + +R SDK EKS R + E+K
Sbjct: 165 DPSWRRAKEIWEKNETGETKEERKKRHKDKKKKREESKERRRHSDKAEKSERKREKEEKK 224
Query: 285 RIR--ERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSK 410
R + +R R ++ D+ + SK +D ++++ ++ SK
Sbjct: 225 RDKSEKRERSRERSKDRKKDRD-SSKHRDKEKDRSRERDRSGSK 267
>SB_24402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 32.7 bits (71), Expect = 0.28
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 4/132 (3%)
Frame = +3
Query: 42 NLTQNFQILI--VFIFNTYINHLIDMSTRNNTKTEKSNESGDTKKIIDKYNRD-DAVQT- 209
+L +N ++L+ + FNT + L+ + ++ T K+ ES + D Y D +A Q
Sbjct: 222 SLIKNGEVLLGALSFFNTNLETLVHKTMEDSVTTVKAYESARIE--YDAYRSDLEAAQAG 279
Query: 210 KYLPDRGDSSDKREKSRILDLAERKRIRERYTIRLKAADQNVNTSVGSKTISTCEDTTKD 389
P +++ + A+ R+R TI+L+ D+N TS + C
Sbjct: 280 PRTPATAARAEETREQFEKQKAKFDRLRNDLTIKLRFLDENKATSASLIGTNAC---ALA 336
Query: 390 KSQTPSKIDTES 425
K+Q+ K+ T S
Sbjct: 337 KAQSARKVVTGS 348
>SB_11602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 32.7 bits (71), Expect = 0.28
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +3
Query: 93 INHLIDMSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDL 272
+N+ T NNT T + DT+ ++ + D V Y D ++SD R+ D
Sbjct: 118 VNNRYTQDTVNNTDTRDPVNNNDTRDPVNNRDTRDPVNNSYTRDPVNNSDTRDPVNNRDT 177
Query: 273 AERKRIRE-RYTIRLKAADQNVNTS 344
+ R+ RY ++ VN +
Sbjct: 178 RDPVNNRDTRYPVKYTDTRYPVNNN 202
>SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17)
Length = 1775
Score = 31.9 bits (69), Expect = 0.49
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +3
Query: 120 RNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKR-IRE 296
+++ +++ D++K + K N DDA + K +P +K++ + E +
Sbjct: 887 KDHAVEKETRRKVDSEKEVGKANHDDA-KPKVIP-----KEKKKNGNGTTMKEASDDVSN 940
Query: 297 RYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTE 422
++ +N+NTS +ST TTK+K +DT+
Sbjct: 941 KHVPHSIEPTKNINTSKNDPDLSTKGSTTKNKVSLLPNVDTD 982
>SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051)
Length = 421
Score = 31.5 bits (68), Expect = 0.65
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +3
Query: 297 RYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESIKKGR 476
R+ K D+++ + SKT +T K +QT K+ E I+ KG E+ + ++KGR
Sbjct: 314 RFKKLCKVKDEDIGR-MKSKTEATAPVQVKFINQTGRKVRLEWINTKGHRESKKELRKGR 372
Query: 477 SVKV 488
+V
Sbjct: 373 CWRV 376
>SB_51776| Best HMM Match : S-antigen (HMM E-Value=0.24)
Length = 1669
Score = 31.1 bits (67), Expect = 0.86
Identities = 35/130 (26%), Positives = 52/130 (40%), Gaps = 5/130 (3%)
Frame = +3
Query: 108 DMSTRNNTKTEKSNESGDTK--KIIDKYNRDDAVQ--TKYLPDRGDSSDKREKSRILDLA 275
D + +NTK EKS G K K K ++ + + T RG+ S D
Sbjct: 435 DFESSHNTKVEKSQLEGGKKGRKSGIKKSKSEVNESNTSRKSIRGNKSQNVSAVSETDTT 494
Query: 276 ERKRIRERYTIRLKAADQNV-NTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCEN 452
E + R T K D+ V + G T + T D + S DT+S AK N
Sbjct: 495 EPETRTRRSTRNNKFKDETVLSDKAGKVTRKSTRGTKADNDRVVS--DTDSQQAKRPTRN 552
Query: 453 DESIKKGRSV 482
+++ K +V
Sbjct: 553 NKNTKDDTTV 562
>SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37)
Length = 942
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +3
Query: 123 NNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRERY 302
+++ E S+ + D+ ++ D TK +RGD S+K + ++D + R R+R
Sbjct: 622 DDSDDESSDSDDEPSDSDDEPSKSDDEPTKSDEERGDKSEKDGERAVIDSSSRFFDRQRR 681
Query: 303 TIRLKAADQNVNTSVGSKTISTCEDTTKD-KSQTPS 407
+ KA + ++ + + T D ++ PS
Sbjct: 682 QRKFKAPGETPSSHFHDRRVGRDRLATGDAEAHLPS 717
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 30.7 bits (66), Expect = 1.1
Identities = 29/123 (23%), Positives = 49/123 (39%)
Frame = +3
Query: 108 DMSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKR 287
D S N T+KS + K I D + + D GD +D +E E +R
Sbjct: 657 DDSRHNYHYTQKSKHHHE-KNIDDSNEKQSTSEKDKFSDNGDDNDDKENDESHAKDEDER 715
Query: 288 IRERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESIK 467
+ R+ + QN N K ++ +D K + + T I G +N+++ +
Sbjct: 716 V--RHAGKDNEHHQN-NYDPKRKDVNIVDDEDKFNNDDENHEKTYQIDNYGPSDNEQNGQ 772
Query: 468 KGR 476
GR
Sbjct: 773 TGR 775
>SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)
Length = 1093
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Frame = +3
Query: 315 KAADQNVNTSVGSKTISTCEDTTKDK-SQTPSKIDTESISAKGLCENDESIKK--GRS-- 479
K + ++ TS+GS+T + ++ S +K+D + +S+ G CE + KK GR+
Sbjct: 592 KCSKKSSVTSIGSETEPAVDYPVRNSPSLEQAKLDAQLLSSSGKCEKTKDHKKQNGRANT 651
Query: 480 -VKVPITSTLISDNDRT 527
+VP S + S ND+T
Sbjct: 652 PSRVPKESKMPS-NDQT 667
>SB_6112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/58 (24%), Positives = 34/58 (58%)
Frame = -1
Query: 520 SLSDISVLVIGTLTDLPFFIDSSFSQSPFAEIDSVSILLGVWLLSFVVSSQVDIVLDP 347
S++DIS+++ G +TD S S F +++V+ + +++L+ + + ++L+P
Sbjct: 58 SIADISLVLSGLVTDYTGIPKSQIFCSVFYPLNTVTFFMSMFILATMADMRRRLILNP 115
>SB_45915| Best HMM Match : CRAM_rpt (HMM E-Value=9.1e-20)
Length = 359
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = +3
Query: 285 RIRERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESI 464
R+R+R +R + + ++ ++ + CE TT+ +S + TE S + CE+
Sbjct: 272 RVRQRVRVRQSESTRECESTTECESTAECESTTECESTRECESTTECESTRE-CESTREC 330
Query: 465 KKGRSVKVPITSTLISDNDRTRIYKVVR 548
+ R + + + TR Y+ R
Sbjct: 331 ESTRECESTRECGSTRECESTREYESTR 358
>SB_41880| Best HMM Match : TolA (HMM E-Value=2.2)
Length = 374
Score = 29.9 bits (64), Expect = 2.0
Identities = 37/187 (19%), Positives = 78/187 (41%), Gaps = 13/187 (6%)
Frame = +3
Query: 132 KTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLA--ERKRIRERYT 305
+T + E D+KK + +++D ++ +S KRE + +A E +R RE
Sbjct: 145 ETSGAEEHPDSKKKQKRKSKEDLQPSRRSNRIHESVRKREIEEAVRIAQEEMRREREEEE 204
Query: 306 IRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAK----GLCENDESIKKG 473
R+ ++ V K E+ + + K+ E + K E +E+ +K
Sbjct: 205 NRILEEEERVKREEEEKKAKEVEEKRMGEDEEQIKLKEEEVEIKEDKTAELELEETTEKS 264
Query: 474 RSVK-VPITSTLISDNDRTRI------YKVVRFINRKPQKGSIQIDLTSRAKKTSKYTET 632
K ++ + I DR + K V+ K + + D+ + +K++K+
Sbjct: 265 NHAKRENLSPSKIHKKDREKTPTKKNKEKNVKKNEEKDVQKEEEKDVQKKVEKSAKHLPQ 324
Query: 633 ERREAKR 653
++ E+K+
Sbjct: 325 KKPESKK 331
>SB_5737| Best HMM Match : DED (HMM E-Value=2.9e-18)
Length = 1719
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 114 STRNNTKT-EKSNESGDTKKIIDKYNRDDAVQT 209
S +N TKT E N S K IID+YNRD +T
Sbjct: 1680 SRQNGTKTFEIDNTSFGWKAIIDQYNRDRVEKT 1712
>SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 918
Score = 29.5 bits (63), Expect = 2.6
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Frame = +3
Query: 222 DRGDSSDKREKSRILDLAERKR---IRERYTI--RLKAADQNVNTSVGS-KTISTCEDTT 383
D + DK+ S +L L K +RERY R +A +++N V S K ++ +
Sbjct: 32 DANINEDKKTAS-LLSLIGPKTYNLLRERYKFHQRNQALGEDINAFVASLKQMTEHYNFG 90
Query: 384 KDKSQTPSKIDTESISAKGLCENDESIKKGRSV 482
+ Q + ESIS K LCE D +++K ++
Sbjct: 91 EFLPQALRDLANESISKKLLCERDLTLEKAVTI 123
>SB_33494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1097
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/57 (22%), Positives = 29/57 (50%)
Frame = +3
Query: 177 DKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRERYTIRLKAADQNVNTSV 347
D +D ++K PDR DS+ + I+ E+K + ++ +++K + + S+
Sbjct: 1030 DGVMKDRRTESKRAPDRPDSASRSRTDSIVSAEEKKMMFDKQRMKMKKRNSSFLDSI 1086
>SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71)
Length = 1281
Score = 29.5 bits (63), Expect = 2.6
Identities = 37/176 (21%), Positives = 64/176 (36%), Gaps = 1/176 (0%)
Frame = +3
Query: 126 NTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDL-AERKRIRERY 302
++KT+ S K+ D++ +D + +S K K + D A R R R
Sbjct: 493 SSKTKTSKPQDQDKQ--DQHKQDKQASRQATRQARQASHKTNKPQDQDKQAARPRQASRK 550
Query: 303 TIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESIKKGRSV 482
T K DQ + + T K Q + S K + +
Sbjct: 551 TKTSKPQDQEKQAT---RPRQASRKTKTSKPQDKQAARPKQASRKTKTSKTSKPQDKQDA 607
Query: 483 KVPITSTLISDNDRTRIYKVVRFINRKPQKGSIQIDLTSRAKKTSKYTETERREAK 650
+ T D D+ + + RKPQ + + SR KTSK + ++++A+
Sbjct: 608 RPASRRTKPQDQDKQDASRKTK--TRKPQDQAARPRQASRKTKTSKQPDQDKQDAR 661
>SB_34096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 29.5 bits (63), Expect = 2.6
Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 6/170 (3%)
Frame = +3
Query: 126 NTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRERYT 305
NTK +K + G K + +DD Y + D R K+ + + K + +
Sbjct: 828 NTKAKKKGKVGKIKNADESITKDDNTSRNYKA----AQDGRSKNNVFTVLMSKPTSRQES 883
Query: 306 IRLKA--ADQ-NVNTSVGSKTISTCEDTTKDKSQTPSKIDTESI-SAKGLCENDESIKKG 473
R +A A Q + +V K I E + + T +D+ + G+ E
Sbjct: 884 QRSQAEVAHQLQTDENVDKKDIKKVEVSIIESPSTAKCVDSADLEDDTGVSNTTEK---- 939
Query: 474 RSVKVPITSTLISDNDR--TRIYKVVRFINRKPQKGSIQIDLTSRAKKTS 617
S+K P L+ R T +V + + KP + ++++ K+T+
Sbjct: 940 SSMKGPNAFKLMMQKSRSPTSDKEVTKNVTAKPAEKKFKLNICYSKKRTN 989
>SB_39590| Best HMM Match : PHD (HMM E-Value=2.2e-18)
Length = 1284
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +3
Query: 465 KKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGSIQIDLTSRAKKTSKYTETERRE 644
K ++ K P S +I + KV + ++KP K ++Q+ ++K+ K E E
Sbjct: 706 KSSKASKTPKLSKVIR-GPKAGKEKVKKKSDKKPAKKTLQLKKKGKSKEKHKVDEKEDEM 764
Query: 645 AKRPPE 662
+PP+
Sbjct: 765 ESKPPK 770
>SB_21939| Best HMM Match : F-box (HMM E-Value=0.001)
Length = 909
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 327 QNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDES 461
++V S +I T + TT S TP DT SI G+C++D S
Sbjct: 802 ESVPNSDQDASIPTAKQTTS--SNTPYIQDTGSIHVTGVCQDDSS 844
>SB_33873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1362
Score = 29.1 bits (62), Expect = 3.5
Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 1/122 (0%)
Frame = +3
Query: 222 DRGDSSDKREKSRILDLAERKRIRERY-TIRLKAADQNVNTSVGSKTISTCEDTTKDKSQ 398
+R S +R+K + + +R+ Y + ++ D N G+ +S CE+ +++
Sbjct: 353 ERFKSPGERKKILVKYARCFRCLRKNYRSYECRSKDSNCKGCAGAHHLSICENQASGQTE 412
Query: 399 TPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGS 578
TP + ES A N + + S V ++ D R + + ++ QKG+
Sbjct: 413 TPQQERGESEQAGEATSNHVASRFAESFHVG-SARKAKLPDVRREWLCINTFGQRDQKGT 471
Query: 579 IQ 584
++
Sbjct: 472 LR 473
>SB_44267| Best HMM Match : DUF602 (HMM E-Value=1.1e-29)
Length = 482
Score = 28.7 bits (61), Expect = 4.6
Identities = 23/87 (26%), Positives = 35/87 (40%)
Frame = +3
Query: 84 NTYINHLIDMSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRI 263
N ++ RN K E TKK IDK R + +Y+ R +S +R R
Sbjct: 317 NAVKKSILKAPKRNAKKAATDAEQTTTKKAIDKKRRRYNSRRRYIRRRRFTSRRRATRR- 375
Query: 264 LDLAERKRIRERYTIRLKAADQNVNTS 344
R+ R R + R + + N N +
Sbjct: 376 -RYTRRRYTRRRGSTRRRHSSGNNNNN 401
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 108 DMSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTK 212
D+ST T EKS S DTK+ I+ + +D+ + +
Sbjct: 2782 DVSTTIKTDKEKSGYSEDTKEQIEDFFQDEGISAE 2816
>SB_21312| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 512
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +3
Query: 375 DTTKDKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLI 509
+T DKS +PSK+ + +S + + N + ++ +VK + +L+
Sbjct: 25 NTLADKSASPSKLSNQFVSMQAILSNSKRLRWFLTVKKTCSDSLL 69
>SB_3218| Best HMM Match : Ribosomal_S25 (HMM E-Value=0.65)
Length = 290
Score = 28.7 bits (61), Expect = 4.6
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +3
Query: 372 EDTTKDKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKVVRF 551
++TTK K + SK ++ + + E +KK + K+ +T +DN+ V
Sbjct: 55 KETTK-KRKKKSKKSSQQTEELDVAMSTECLKKAKKSKLKVTEGNENDNENASENGVDIA 113
Query: 552 INRKPQKG--SIQIDLTSRAKKTSKYTETERREA 647
K +KG S +K SK + E REA
Sbjct: 114 DYNKDEKGKKSHSSSKGENKEKNSKKAKRETREA 147
>SB_52215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 742
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/86 (20%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +3
Query: 216 LPDRGDSSDKREKSRILDLAERKRIRE--RYTIRLKAADQNVNTSVGSKTISTCEDTTKD 389
+P+ ++ + K + ++ E ++++ R +KA + + KT +
Sbjct: 55 IPNTKETGGREIKQKNINGVENSKVKDPRRNGRSVKAKTTKAHFTDKEKTDHLKTNKKSR 114
Query: 390 KSQTPSKIDTESISAKGLCENDESIK 467
K++TP K +E++ + CE ESI+
Sbjct: 115 KNETPEKDSSENVKSPIKCELSESIQ 140
>SB_29494| Best HMM Match : Mpp10 (HMM E-Value=0.62)
Length = 631
Score = 28.3 bits (60), Expect = 6.1
Identities = 25/140 (17%), Positives = 56/140 (40%), Gaps = 4/140 (2%)
Frame = +3
Query: 126 NTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRERYT 305
+TKT+ + S + + N D + + L D+ + R++ + + R
Sbjct: 420 STKTKTRSHSRSRSPTLSRSNNDLRSRYRGLVDKDSHRNPRDRRSPRRTKPKGPVHSRLQ 479
Query: 306 IRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKG----LCENDESIKKG 473
+ K+ ++ V K +S + K+ + S + G + ++ K+
Sbjct: 480 LPQKSLEEEVIKISKPKPVSETDSILDKKADIVKNVKKASATQNGKQSKILGKVDARKRL 539
Query: 474 RSVKVPITSTLISDNDRTRI 533
+ VP+ S IS N +T++
Sbjct: 540 SAKTVPVLSKKISINIKTKV 559
>SB_29635| Best HMM Match : E-MAP-115 (HMM E-Value=1.2)
Length = 2658
Score = 28.3 bits (60), Expect = 6.1
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Frame = +3
Query: 165 KKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRERYTIRLKAADQNVNTS 344
+++ +++N+D V+ K + D+ K RI E K ++E+ + R+ +DQ +
Sbjct: 2311 ERVKEQFNKDLEVRMK------EQVDREVKERIRRQME-KELQEKESQRV--SDQVKQEA 2361
Query: 345 VGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDES--IKKGRSVKVPITSTLISDN 518
+KT T ++ + + + E + +G E K SVK T + +
Sbjct: 2362 KNAKTTQTTQNLGQ-RVGAKLRERAEVLPTEGPLERGTHPMFTKDESVKRSQVGTQVKEE 2420
Query: 519 DR-TRIYKVVRFINRKPQKGSIQIDLTSRAKKTSKY---TETERREAKRPPEIASGV 677
+ T + + + + I +R K+TS TET RR PP+I G+
Sbjct: 2421 ELYTPTVPTYAQVGIQVAEDELHIPKITRRKETSAAQTDTETSRRAPMLPPDIFLGL 2477
>SB_21536| Best HMM Match : RVT_1 (HMM E-Value=0.0043)
Length = 831
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 129 TKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILD 269
T T KS+++ ++ K D + DD D GD SDK ++++LD
Sbjct: 679 TMTSKSDKTSESNKEEDSDDDDD-------DDYGDDSDKSNEAKVLD 718
>SB_35169| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = -1
Query: 370 QVDIVLDPTLVLTFWSAAFNLMVYLSLMRFLSARSKI 260
Q+D+VL PTL+ + A + ++Y+S R L+ R+ +
Sbjct: 167 QIDLVLHPTLI-SIVLAVVHSLLYMSFRRHLNRRNTL 202
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +3
Query: 138 EKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRERYTIRLK 317
E++ E K I++ + + + K ++ ++RE+ RI L + K +ER LK
Sbjct: 912 ERTEEKARIMKEIEEKEKKEEAERKAKEEK--EREERERKRICQLLKEKAEQERRERELK 969
Query: 318 AADQNV 335
A ++ +
Sbjct: 970 AREEKL 975
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,938,748
Number of Sequences: 59808
Number of extensions: 329853
Number of successful extensions: 1295
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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