Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5d01
         (507 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    25   0.39 
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    25   0.39 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   4.8  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.3  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 25.0 bits (52), Expect = 0.39
 Identities = 14/57 (24%), Positives = 29/57 (50%)
 Frame = -3

Query: 193 FDSIVVFERLLVLLLTFNISLSATLFVIDILMFCCIVTKQF*IFEFLLHFLRSDFEL 23
           +DS ++++   +++L  N+    T ++       C +TK+    EFLL  +  D +L
Sbjct: 343 YDSFMIYKTTNIIILGLNVVYVVTAWI-------CAITKRDMFVEFLLKLVDFDSKL 392


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 25.0 bits (52), Expect = 0.39
 Identities = 14/57 (24%), Positives = 29/57 (50%)
 Frame = -3

Query: 193 FDSIVVFERLLVLLLTFNISLSATLFVIDILMFCCIVTKQF*IFEFLLHFLRSDFEL 23
           +DS ++++   +++L  N+    T ++       C +TK+    EFLL  +  D +L
Sbjct: 68  YDSFMIYKTTNIIILGLNVVYVVTAWI-------CAITKRDMFVEFLLKLVDFDSKL 117


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +3

Query: 408 EKRIICKECPSLT 446
           +KR+ C +CP +T
Sbjct: 228 DKRLTCPKCPFIT 240


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 7   IVFCHLIQNRCVENATKIRK 66
           + FC   QN+ +E  +K+ K
Sbjct: 94  VFFCLFYQNKLIEVISKLHK 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,123
Number of Sequences: 336
Number of extensions: 1642
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)