Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5c19
(476 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41264-2|AAA82422.1| 124|Caenorhabditis elegans Ribosomal prote... 150 4e-37
AC006708-12|AAT81173.1| 908|Caenorhabditis elegans Hypothetical... 30 0.99
AC006708-11|AAF60426.2| 1019|Caenorhabditis elegans Hypothetical... 30 0.99
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 29 1.3
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 29 1.3
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 29 1.3
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 29 1.3
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 29 1.7
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 29 1.7
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 29 1.7
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 29 1.7
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical pr... 29 1.7
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 29 1.7
Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 27 5.3
AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical ... 27 5.3
AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage... 27 5.3
U53336-7|AAA96179.1| 642|Caenorhabditis elegans Hypothetical pr... 27 9.2
>U41264-2|AAA82422.1| 124|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 33 protein.
Length = 124
Score = 150 bits (364), Expect = 4e-37
Identities = 71/121 (58%), Positives = 89/121 (73%)
Frame = +1
Query: 64 VLRKASKPRHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYR 243
V R+ S P GRLY KA+FTG+KRGLR Q E+T+LLK+EG ++ DA FYAGK VY+Y+
Sbjct: 6 VARRPSAPTTGRLYVKAIFTGFKRGLRTQSEHTSLLKLEGVFNKEDAGFYAGKRVVYLYK 65
Query: 244 AKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSR 423
A +T G T+ RAIWGK+TRPHGN+G+VRAKF N+P A+G RIRV+LYPS
Sbjct: 66 AHNKTLKTG--HTVATRTRAIWGKITRPHGNAGAVRAKFHHNIPPSALGKRIRVLLYPSN 123
Query: 424 I 426
I
Sbjct: 124 I 124
>AC006708-12|AAT81173.1| 908|Caenorhabditis elegans Hypothetical
protein Y110A7A.9b protein.
Length = 908
Score = 29.9 bits (64), Expect = 0.99
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 366 RLELGSDTARVAMWAGHLAPDSTQLGFFATGTSGNWCPLLSSV-HIDAMLASI 211
++ L T + W GHLA ++ Q+ A + NW ++ + DA+LA +
Sbjct: 839 KMGLDDPTEVESKWIGHLADEAKQIRVLAEASRRNWPDVVEATSSADAILARL 891
>AC006708-11|AAF60426.2| 1019|Caenorhabditis elegans Hypothetical
protein Y110A7A.9a protein.
Length = 1019
Score = 29.9 bits (64), Expect = 0.99
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 366 RLELGSDTARVAMWAGHLAPDSTQLGFFATGTSGNWCPLLSSV-HIDAMLASI 211
++ L T + W GHLA ++ Q+ A + NW ++ + DA+LA +
Sbjct: 950 KMGLDDPTEVESKWIGHLADEAKQIRVLAEASRRNWPDVVEATSSADAILARL 1002
>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +1
Query: 145 NQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTK 294
N E KVE AKD+ KHCV ++A+ P+ P K K
Sbjct: 534 NDQEPAVATKVEMAKDKEGVKTTQRKHCVIKFQAR---PLSDRPENLKAK 580
>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +1
Query: 145 NQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTK 294
N E KVE AKD+ KHCV ++A+ P+ P K K
Sbjct: 534 NDQEPAVATKVEMAKDKEGVKTTQRKHCVIKFQAR---PLSDRPENLKAK 580
>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +1
Query: 145 NQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTK 294
N E KVE AKD+ KHCV ++A+ P+ P K K
Sbjct: 534 NDQEPAVATKVEMAKDKEGVKTTQRKHCVIKFQAR---PLSDRPENLKAK 580
>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +1
Query: 145 NQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTK 294
N E KVE AKD+ KHCV ++A+ P+ P K K
Sbjct: 534 NDQEPAVATKVEMAKDKEGVKTTQRKHCVIKFQAR---PLSDRPENLKAK 580
>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +1
Query: 145 NQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTK 294
N E KVE AKD+ KHCV ++A+ P+ P K K
Sbjct: 534 NDQEPAVATKVEMAKDKEGVKTTQRKHCVIKFQAR---PLSDRPENLKAK 580
>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +1
Query: 145 NQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTK 294
N E KVE AKD+ KHCV ++A+ P+ P K K
Sbjct: 534 NDQEPAVATKVEMAKDKEGVKTTQRKHCVIKFQAR---PLSDRPENLKAK 580
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 29.1 bits (62), Expect = 1.7
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = +2
Query: 2 LRHPKKKWPRLLQQLLWSPQRSFAKHQSPATAGCTQRPYSQDISVVYATSTRTPLSSRLK 181
+R P L Q + SP +SF QS A+ S ++ TS L R+
Sbjct: 555 IRQPPTYDVLLKQGKITSPVKSFGYEQSSASEDSIVAHASAQVTPPTKTSGNHSLERRMG 614
Query: 182 EQKTVMMQSFMLASIASMCTELR 250
+ KT + + +MC ++R
Sbjct: 615 KNKTSESSGYTSDAGVAMCAKMR 637
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 29.1 bits (62), Expect = 1.7
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = +2
Query: 2 LRHPKKKWPRLLQQLLWSPQRSFAKHQSPATAGCTQRPYSQDISVVYATSTRTPLSSRLK 181
+R P L Q + SP +SF QS A+ S ++ TS L R+
Sbjct: 555 IRQPPTYDVLLKQGKITSPVKSFGYEQSSASEDSIVAHASAQVTPPTKTSGNHSLERRMG 614
Query: 182 EQKTVMMQSFMLASIASMCTELR 250
+ KT + + +MC ++R
Sbjct: 615 KNKTSESSGYTSDAGVAMCAKMR 637
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 29.1 bits (62), Expect = 1.7
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = +2
Query: 2 LRHPKKKWPRLLQQLLWSPQRSFAKHQSPATAGCTQRPYSQDISVVYATSTRTPLSSRLK 181
+R P L Q + SP +SF QS A+ S ++ TS L R+
Sbjct: 421 IRQPPTYDVLLKQGKITSPVKSFGYEQSSASEDSIVAHASAQVTPPTKTSGNHSLERRMG 480
Query: 182 EQKTVMMQSFMLASIASMCTELR 250
+ KT + + +MC ++R
Sbjct: 481 KNKTSESSGYTSDAGVAMCAKMR 503
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 29.1 bits (62), Expect = 1.7
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = +2
Query: 2 LRHPKKKWPRLLQQLLWSPQRSFAKHQSPATAGCTQRPYSQDISVVYATSTRTPLSSRLK 181
+R P L Q + SP +SF QS A+ S ++ TS L R+
Sbjct: 555 IRQPPTYDVLLKQGKITSPVKSFGYEQSSASEDSIVAHASAQVTPPTKTSGNHSLERRMG 614
Query: 182 EQKTVMMQSFMLASIASMCTELR 250
+ KT + + +MC ++R
Sbjct: 615 KNKTSESSGYTSDAGVAMCAKMR 637
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 29.1 bits (62), Expect = 1.7
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = +2
Query: 2 LRHPKKKWPRLLQQLLWSPQRSFAKHQSPATAGCTQRPYSQDISVVYATSTRTPLSSRLK 181
+R P L Q + SP +SF QS A+ S ++ TS L R+
Sbjct: 555 IRQPPTYDVLLKQGKITSPVKSFGYEQSSASEDSIVAHASAQVTPPTKTSGNHSLERRMG 614
Query: 182 EQKTVMMQSFMLASIASMCTELR 250
+ KT + + +MC ++R
Sbjct: 615 KNKTSESSGYTSDAGVAMCAKMR 637
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 29.1 bits (62), Expect = 1.7
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = +2
Query: 2 LRHPKKKWPRLLQQLLWSPQRSFAKHQSPATAGCTQRPYSQDISVVYATSTRTPLSSRLK 181
+R P L Q + SP +SF QS A+ S ++ TS L R+
Sbjct: 555 IRQPPTYDVLLKQGKITSPVKSFGYEQSSASEDSIVAHASAQVTPPTKTSGNHSLERRMG 614
Query: 182 EQKTVMMQSFMLASIASMCTELR 250
+ KT + + +MC ++R
Sbjct: 615 KNKTSESSGYTSDAGVAMCAKMR 637
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 29.1 bits (62), Expect = 1.7
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = +2
Query: 2 LRHPKKKWPRLLQQLLWSPQRSFAKHQSPATAGCTQRPYSQDISVVYATSTRTPLSSRLK 181
+R P L Q + SP +SF QS A+ S ++ TS L R+
Sbjct: 421 IRQPPTYDVLLKQGKITSPVKSFGYEQSSASEDSIVAHASAQVTPPTKTSGNHSLERRMG 480
Query: 182 EQKTVMMQSFMLASIASMCTELR 250
+ KT + + +MC ++R
Sbjct: 481 KNKTSESSGYTSDAGVAMCAKMR 503
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 29.1 bits (62), Expect = 1.7
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = +2
Query: 2 LRHPKKKWPRLLQQLLWSPQRSFAKHQSPATAGCTQRPYSQDISVVYATSTRTPLSSRLK 181
+R P L Q + SP +SF QS A+ S ++ TS L R+
Sbjct: 555 IRQPPTYDVLLKQGKITSPVKSFGYEQSSASEDSIVAHASAQVTPPTKTSGNHSLERRMG 614
Query: 182 EQKTVMMQSFMLASIASMCTELR 250
+ KT + + +MC ++R
Sbjct: 615 KNKTSESSGYTSDAGVAMCAKMR 637
>Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical
protein F45E10.1e protein.
Length = 1234
Score = 29.1 bits (62), Expect = 1.7
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = +2
Query: 2 LRHPKKKWPRLLQQLLWSPQRSFAKHQSPATAGCTQRPYSQDISVVYATSTRTPLSSRLK 181
+R P L Q + SP +SF QS A+ S ++ TS L R+
Sbjct: 135 IRQPPTYDVLLKQGKITSPVKSFGYEQSSASEDSIVAHASAQVTPPTKTSGNHSLERRMG 194
Query: 182 EQKTVMMQSFMLASIASMCTELR 250
+ KT + + +MC ++R
Sbjct: 195 KNKTSESSGYTSDAGVAMCAKMR 217
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 29.1 bits (62), Expect = 1.7
Identities = 21/83 (25%), Positives = 34/83 (40%)
Frame = +2
Query: 2 LRHPKKKWPRLLQQLLWSPQRSFAKHQSPATAGCTQRPYSQDISVVYATSTRTPLSSRLK 181
+R P L Q + SP +SF QS A+ S ++ TS L R+
Sbjct: 555 IRQPPTYDVLLKQGKITSPVKSFGYEQSSASEDSIVAHASAQVTPPTKTSGNHSLERRMG 614
Query: 182 EQKTVMMQSFMLASIASMCTELR 250
+ KT + + +MC ++R
Sbjct: 615 KNKTSESSGYTSDAGVAMCAKMR 637
>Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical
protein F58A4.1 protein.
Length = 254
Score = 27.9 bits (59), Expect = 4.0
Identities = 25/82 (30%), Positives = 34/82 (41%)
Frame = +2
Query: 77 HQSPATAGCTQRPYSQDISVVYATSTRTPLSSRLKEQKTVMMQSFMLASIASMCTELRRG 256
H SP+T+ T S S +TST TP + + T S +S + T +
Sbjct: 94 HSSPSTSTSTSTSTSTSTSTSRSTSTVTPTT---RSSTTTTATSTPTSSSKATTTSAQIT 150
Query: 257 HQFPEVPVAKKPSCVLSGAR*P 322
PE+P A P VL G P
Sbjct: 151 Q--PEIPQA-APGTVLKGEEFP 169
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 425 ILEGYSITRILCPIAWAGRLDLNLARTLPELP 330
+L+G S+ RI AW +D+ + T P P
Sbjct: 38 VLDGVSVFRIETDAAWTDMMDIQITVTPPSKP 69
>AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical
protein Y39A1B.3 protein.
Length = 1499
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +2
Query: 116 YSQDISVVYATSTRTPLSSRLKEQKTVMMQSFMLASIASMCTELRRG 256
+S D+ +V+A S L+ RL TV +Q ++ SIAS + +RG
Sbjct: 141 HSVDVELVHAVSMFVILTQRL----TVQLQLYVSKSIASANQQAKRG 183
>AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage
compensation protein protein.
Length = 1455
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +2
Query: 116 YSQDISVVYATSTRTPLSSRLKEQKTVMMQSFMLASIASMCTELRRG 256
+S D+ +V+A S L+ RL TV +Q ++ SIAS + +RG
Sbjct: 141 HSVDVELVHAVSMFVILTQRL----TVQLQLYVSKSIASANQQAKRG 183
>U53336-7|AAA96179.1| 642|Caenorhabditis elegans Hypothetical
protein K07C11.9 protein.
Length = 642
Score = 26.6 bits (56), Expect = 9.2
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 234 IDAMLASIKDCIITVFCSFNLEESGVLVL 148
IDAM+ D +++V S LE+SG+L L
Sbjct: 492 IDAMIEGNSDVLVSVQVSEMLEKSGILEL 520
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,020,852
Number of Sequences: 27780
Number of extensions: 240536
Number of successful extensions: 571
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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