Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5c16
(648 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1821 + 40126389-40126508,40126589-40126646,40126782-401268... 45 5e-05
12_02_1247 - 27322920-27323175,27323252-27323490,27324309-27324776 40 0.001
04_04_0010 - 22137258-22137428,22137734-22137794,22137917-221379... 39 0.003
05_04_0338 - 20392482-20392832,20393236-20393305,20393571-203937... 38 0.005
06_01_0228 - 1736373-1736721,1739915-1740120,1740513-1740844,174... 37 0.016
02_04_0371 + 22434710-22435102,22435428-22435624,22435707-224358... 37 0.016
07_03_1724 + 29056386-29056717,29057026-29057245,29057334-290575... 34 0.085
04_04_0005 + 22095107-22095210,22095347-22095431,22095553-220956... 34 0.085
10_08_0732 - 20173816-20174137,20175824-20176023,20176099-20176998 34 0.11
03_04_0189 - 18256878-18257322,18260724-18260849,18261321-18261691 33 0.15
03_06_0541 - 34607071-34607353,34608167-34608399,34609093-346092... 33 0.26
06_01_0023 + 227014-227166,227893-228001,228096-228157,228284-22... 32 0.45
03_06_0542 - 34611864-34612364,34613932-34614132,34614745-34615059 31 1.0
05_03_0369 - 13136146-13136175,13136237-13136908,13136926-131370... 30 1.4
05_03_0253 - 11014334-11014592,11015061-11015296,11015370-11015870 30 1.4
03_05_1014 - 29687343-29687410,29688054-29688191,29689246-296892... 30 1.8
10_01_0202 + 2178297-2178406,2180725-2180980,2181838-2181912,218... 29 2.4
09_06_0061 + 20596360-20596618,20597039-20597158,20597329-205974... 29 2.4
07_03_0690 - 20714691-20714922,20715498-20715572,20715914-207160... 29 2.4
02_05_0450 - 29117826-29118212,29118307-29118733,29119158-291192... 29 2.4
06_03_0725 - 23894215-23894412,23894660-23894803,23895058-238951... 29 3.2
07_01_0614 - 4545306-4545833 29 4.2
03_06_0497 - 34332310-34334415 29 4.2
03_02_0068 + 5390004-5390425,5390517-5390949 29 4.2
09_06_0145 + 21162308-21163666 28 5.6
01_06_0985 - 33594588-33595451,33597655-33598518 28 5.6
01_01_0780 - 6036454-6037992 28 5.6
05_06_0254 - 26706830-26706943,26707063-26707193,26707330-267074... 28 7.4
02_05_0504 - 29590852-29591862 28 7.4
10_01_0129 + 1535823-1537196 27 9.7
06_02_0342 + 14789190-14789205,14789868-14789891,14789968-147901... 27 9.7
>01_06_1821 +
40126389-40126508,40126589-40126646,40126782-40126837,
40127076-40127176,40127336-40127405,40127501-40127570,
40127970-40128026,40128110-40128177,40128258-40128338,
40128474-40128551,40128644-40128799,40128874-40128933,
40129253-40129317,40130002-40130059
Length = 365
Score = 45.2 bits (102), Expect = 5e-05
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Frame = +2
Query: 293 CVVAWGDCCNPPVLLCHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKSDRFPP--GLM 466
CV A G NPPVL HG A S+R ++ ++ + ++ I D G G SD+ P G
Sbjct: 115 CVEA-GSSSNPPVLFIHGFPSQAYSYRNVLPVVSDNYHAIAFDWLGFGFSDKPQPDYGFD 173
Query: 467 INIYDLVYAVNAVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPGKLTKLIEIDP 625
+ + ++ ++ D ++V A I Y + KL LI ++P
Sbjct: 174 YTLDEYTSSLESLINAVAPDKLSIVVQGYFAPIVIKYANEHQDKLNHLILVNP 226
>12_02_1247 - 27322920-27323175,27323252-27323490,27324309-27324776
Length = 320
Score = 40.3 bits (90), Expect = 0.001
Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 1/122 (0%)
Frame = +2
Query: 257 KEWYIQVPWGRMCVVAWGDCCNPPVLLCHGLADSATSFR-PLIKLMPEKFYFIGIDLPGC 433
+ W V + V G PPVLL HG + S+R + L F + DL G
Sbjct: 7 RHWNADVNGISLHVAEQGPADGPPVLLIHGFPELWLSWRHQMAALAARGFRALAPDLRGY 66
Query: 434 GKSDRFPPGLMINIYDLVYAVNAVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPGKLTKLI 613
G S ++ +V + A+ H +VGH LGA + L P L ++
Sbjct: 67 GDSTVPDDPAAYTVFHIVGDLVALLDHLALPKVMVVGHDLGAQVAWHLCLFRPDMLLAVV 126
Query: 614 EI 619
+
Sbjct: 127 NL 128
>04_04_0010 -
22137258-22137428,22137734-22137794,22137917-22137984,
22138524-22138733,22138867-22138907,22139011-22139060,
22139260-22139348,22139468-22139542,22139791-22139882,
22140131-22140182,22140515-22140631,22141267-22141496,
22141618-22141672,22141781-22141900
Length = 476
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/69 (34%), Positives = 33/69 (47%)
Frame = -2
Query: 494 QRTPDRIC*SSGPAGTGPTCRSPGGLCL*NKISRASI*LEGGSWSRSLLGHGRAEPGDCS 315
Q RIC + G CRS G + ++ AS + G+ +R LLG G A G CS
Sbjct: 74 QEPIQRICIAESLMGHWLPCRSDGKASSHHGVAAASAAVVSGAGARRLLGEGTAGSGHCS 133
Query: 314 NRPKPPRTS 288
++ K P S
Sbjct: 134 SKGKVPLLS 142
>05_04_0338 -
20392482-20392832,20393236-20393305,20393571-20393790,
20394249-20394342,20394754-20394865,20395081-20395487
Length = 417
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +2
Query: 323 PPVLLCHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKSDRFPPG 460
PP+LL HG S +R I ++ E + IDL G G SD+ PPG
Sbjct: 119 PPLLLVHGFGASVGHWRRNIGVLSESYTVYAIDLLGFGASDK-PPG 163
>06_01_0228 -
1736373-1736721,1739915-1740120,1740513-1740844,
1740935-1741499
Length = 483
Score = 36.7 bits (81), Expect = 0.016
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Frame = +2
Query: 329 VLLCHGLADSA-----TSFRPLIKLMPEKFYFIGIDLPGCGKSDRFPPGLMINIYDLVYA 493
V+ HG S+ T F + ++ +DL G G+S + P + + + V
Sbjct: 196 VVFVHGFISSSVFWTETVFPAFSEAAKGRYRMFAVDLLGFGRSPK-PADSLYTLREHVEM 254
Query: 494 VN-AVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPGKLTKLIEIDPINFYAVP 646
+ +V + +R F++V HSLG+++ + YP + L + P ++ VP
Sbjct: 255 IERSVLQRYRLRKFHVVAHSLGSVLALALAVKYPDAVQSLTLLAP-PYFPVP 305
>02_04_0371 + 22434710-22435102,22435428-22435624,22435707-22435824,
22436458-22436574,22436702-22436803,22437431-22437487,
22437976-22438044,22438423-22438533,22438597-22438791,
22439023-22439121,22439656-22440222,22440344-22440568,
22441036-22441338,22441640-22441707,22441947-22442105,
22442230-22442475,22442549-22442680,22443243-22443351,
22444131-22444283,22444359-22444601,22444695-22444862,
22445013-22445156,22445238-22445699,22446495-22446791,
22446867-22447024,22447139-22447246,22447474-22447732
Length = 1752
Score = 36.7 bits (81), Expect = 0.016
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Frame = +2
Query: 308 GDCCNPPVLL-CHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKSDRFPPGLMINIYDL 484
GDC + V+L HG ++ + P++K + I +DLPG G+S+ + N +
Sbjct: 1475 GDCTHEKVILFLHGFLGTSEDWVPMMKALSPSARVIAVDLPGHGESEILQHDVE-NSNQI 1533
Query: 485 VYAVNAVA-------KHFRWDAFNLVGHSLGAII 565
++V +VA ++ A +VG+S+GA I
Sbjct: 1534 SFSVQSVADLLLKLIRNITDGAVVVVGYSMGARI 1567
>07_03_1724 +
29056386-29056717,29057026-29057245,29057334-29057530,
29057628-29057988
Length = 369
Score = 34.3 bits (75), Expect = 0.085
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 410 IGIDLPGCGKSDRFPPGLMINIYDLVYAVN-AVAKHFRWDAFNLVGHSLGAIIGKLYNLV 586
+ +DL G GKS + P M + D V + ++ +F+LV HS+G II
Sbjct: 113 LAVDLLGFGKSPK-PANCMYRLKDHVEMIERSLIDPLNLSSFHLVSHSMGCIIALALAAK 171
Query: 587 YPGKLTKLIEIDPINFYA 640
+P ++ + I P F A
Sbjct: 172 HPERVRSITLIAPPYFGA 189
>04_04_0005 +
22095107-22095210,22095347-22095431,22095553-22095623,
22096613-22096727,22096884-22096963,22097302-22097386,
22098081-22098175,22098298-22098348,22098866-22098946,
22099659-22099731,22100057-22100134,22100224-22100256
Length = 316
Score = 34.3 bits (75), Expect = 0.085
Identities = 37/128 (28%), Positives = 54/128 (42%), Gaps = 4/128 (3%)
Frame = +2
Query: 194 PNTHRSL*SF*KIIFEMSLLEKEWYIQVPWGRMCVVAWGDCCNPPVLLC-HGLADSATSF 370
P TH SL + + + + ++E + +P + PV+ C HG S SF
Sbjct: 32 PATHHSLHKYAPLDWS-AYFDEERRVAIPDTEDVFNVYMARSEGPVVFCLHGGGYSGLSF 90
Query: 371 RPLIKLMPEKFYFIGIDLPGCGKSDRFPPGLMINIYDLVYAVNAVAKHFRWD---AFNLV 541
M EK + +DL G GKS ++I L V AV + D A LV
Sbjct: 91 ALAASRMKEKARVVSMDLRGHGKSTTSDDS-DLSIETLSSDVIAVLRTLYGDSPPAIILV 149
Query: 542 GHSLGAII 565
GHS+G +
Sbjct: 150 GHSMGGSV 157
>10_08_0732 - 20173816-20174137,20175824-20176023,20176099-20176998
Length = 473
Score = 33.9 bits (74), Expect = 0.11
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Frame = +2
Query: 308 GDCCNPPVLLCHGLADSATSFRPLI--KLMPE---KFYFIGIDLPGCGKSDRFPPGLMIN 472
G VL HG S+ + + + PE + +DL G G+S + P +
Sbjct: 190 GAATEEDVLFIHGFISSSGFWTETVLPNVSPEARARRRLFAVDLLGFGRSPK-PADSLYT 248
Query: 473 IYDLVYAVN-AVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPGKLTKLIEIDPINFYAVP 646
+ + V + +V + +F++V HSLG+I+ + YP + L + P ++ VP
Sbjct: 249 LREHVEMIERSVIERHGVKSFHIVAHSLGSILALALAVKYPAAVRSLTLVAP-PYFPVP 306
>03_04_0189 - 18256878-18257322,18260724-18260849,18261321-18261691
Length = 313
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/97 (21%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +2
Query: 329 VLLCHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKS--DRFPPGLMINIYDLVYAVNA 502
++L HG + ++ L+ + + + D G G + D F + + A
Sbjct: 21 IVLAHGFGTDQSVWKHLVPHLVADYRVVLFDTMGAGPTNPDYFDFSRYATLEGYALDLLA 80
Query: 503 VAKHFRWDAFNLVGHSLGAIIGKLYNLVYPGKLTKLI 613
+ + R + VGHS+ A+IG + ++ P +KL+
Sbjct: 81 ILQELRVASCIYVGHSVSAVIGAIASISRPDLFSKLV 117
>03_06_0541 -
34607071-34607353,34608167-34608399,34609093-34609275,
34609357-34609659
Length = 333
Score = 32.7 bits (71), Expect = 0.26
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +2
Query: 323 PPVLLCHGLADSATSFRPLIKLMPEKFY-FIGIDLPGCGKSDRFPPGLMINIYDLVYAVN 499
P VL HG + S+R + + + Y + DL G G + P I+ LV +
Sbjct: 32 PAVLFVHGFPELWYSWRHQMGHLAARGYRCVAPDLRGYGGTTAPPEHTSYTIFHLVGDLV 91
Query: 500 AVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPGKLTKLIEI 619
A+ +VGH GAI+ L+ P ++ L+ +
Sbjct: 92 ALLDALELPQVFVVGHDWGAIVSWNLCLLRPDRVRALVNL 131
>06_01_0023 +
227014-227166,227893-228001,228096-228157,228284-228493,
228609-228696,228774-228936,229037-229235,229456-229653,
229887-230018,230182-230302,230453-230563,230710-230779,
230880-231063,231137-231346
Length = 669
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 524 DAFNLVGHSLGAIIGKLYNLVYPGKLTKLIEIDPINFYAVP 646
DAFN H LG+++G+ VYP + + DP+N VP
Sbjct: 610 DAFNYTDHYLGSVLGRYDGNVYPALYEEAWK-DPLNDTDVP 649
>03_06_0542 - 34611864-34612364,34613932-34614132,34614745-34615059
Length = 338
Score = 30.7 bits (66), Expect = 1.0
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Frame = +2
Query: 329 VLLCHGLADSATSFRPLIK-LMPEKFYFIGIDLPGCGKSDRFPPGLMINIYDLVYAVNAV 505
VL HG + S+R ++ L F + DL G G +D P + + +V + A+
Sbjct: 38 VLFLHGFPELWYSWRHQMEHLAGRGFRCLAPDLRGYGDTDAPPEIESYSAFHVVGDLVAL 97
Query: 506 AKHFRWDAFNLVGHSLGAIIGKLYNLVYPGKLTKLI 613
+VGH GAII L P ++T L+
Sbjct: 98 LDALGLAKVFVVGHDWGAIIAWYMCLFRPDRVTALV 133
>05_03_0369 -
13136146-13136175,13136237-13136908,13136926-13137016,
13137184-13137416,13137459-13137731,13137877-13138265,
13138325-13139156,13139847-13139922,13140027-13140414,
13141395-13141748,13142069-13142333,13143366-13143716
Length = 1317
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +1
Query: 274 GSLGPDVRGGLGRLLQSPGSALPWPSRLRDQLPPSNQIDAREILFYRHRP 423
G G DVRGGL R + G P S + PP +Q D R + H P
Sbjct: 446 GKGGRDVRGGLRRCRRREGGRRP-DSPTTEGRPPISQKDDRLVTLTMHDP 494
>05_03_0253 - 11014334-11014592,11015061-11015296,11015370-11015870
Length = 331
Score = 30.3 bits (65), Expect = 1.4
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Frame = +2
Query: 287 RMCVVAWGDCCNPPVLLCHGLADSATSFRPLIKLMPEKFY-FIGIDLPGCGKSDRFPPGL 463
RM V G PPVLL HG ++R ++ + + Y + DL G G SD L
Sbjct: 23 RMHVAEAGPPGAPPVLLLHGFPQVWYAWRHQMRALADAGYRAVAPDLRGYGDSDAPAAEL 82
Query: 464 ----MINIYDLVYAVNAVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPGKLTKLIEI 619
M + DLV ++AV + F +V H GA+ L P ++ L+ +
Sbjct: 83 QYTAMHVVGDLVALLDAVVGAGK-PVF-VVAHDWGALTAWNLCLFRPDRVRALVSL 136
>03_05_1014 - 29687343-29687410,29688054-29688191,29689246-29689294,
29689623-29689728,29690184-29690332,29690840-29690921,
29691308-29691360,29691644-29691729,29691855-29691909,
29692179-29692579,29693564-29693660,29694191-29694322,
29694426-29694476,29694659-29694751,29694917-29694992,
29695711-29695856,29696009-29696043,29696056-29696107,
29696290-29696401,29696617-29696813,29697456-29697560,
29697667-29697819,29698317-29698424,29698608-29698752,
29699374-29699432,29701397-29701441,29701677-29701730,
29701901-29702113,29702873-29702958,29704492-29704572,
29704670-29704729,29705599-29705644,29706212-29706286,
29706376-29706512,29708306-29708366,29708726-29708743,
29709710-29709743,29709811-29709902,29709997-29710029
Length = 1260
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 287 RMCVVAWGDCCNPPVLLCHGLADSATSFRPLIKLMPE 397
++ + W CC P LLC G D+ +++ L+ L+ E
Sbjct: 965 KLLPIGWTACCASPSLLCEG--DTVLAYQQLVLLLIE 999
>10_01_0202 +
2178297-2178406,2180725-2180980,2181838-2181912,
2182386-2182436,2182598-2182724,2182806-2182952,
2183846-2183976,2184088-2184189,2184604-2184702,
2185117-2185182,2185218-2185448
Length = 464
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 329 VLLCHGLADSATSFRPLI--KLMPEKFYFIGIDLPGCGKSDRFPPGLMINIYDLVYAVNA 502
V LCHG D+ T F I K+ + +D PG G S+ GL I V+
Sbjct: 191 VCLCHGYGDTCTFFLDGIARKIASAGYGVFALDYPGFGLSE----GLHGFIPSFDTLVDD 246
Query: 503 VAKHF 517
VA+HF
Sbjct: 247 VAEHF 251
>09_06_0061 +
20596360-20596618,20597039-20597158,20597329-20597462,
20597578-20597730,20597816-20597927,20598022-20598352,
20598524-20598737,20598842-20598931,20599669-20599924,
20600029-20600141,20600733-20600831,20600915-20600980,
20601018-20601167,20601278-20601368,20601710-20601749,
20603888-20605247,20605478-20605507,20605834-20605885,
20606264-20606397,20606513-20606665,20607089-20607202
Length = 1356
Score = 29.5 bits (63), Expect = 2.4
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +2
Query: 323 PPVLLCHGLADSATSFRPLIKLMPEKFYFI-GIDLPGCGKSDRFPPGLMINIYDLVYAVN 499
P VLL HG S FR I + ++ + I L G GKS++ P IN +L++ +
Sbjct: 480 PSVLLVHGFGASLQHFRDNIGAIADQGCQVWAITLLGFGKSEK--PN--INYSELLW--S 533
Query: 500 AVAKHFRWDA----FNLVGHSLGAIIGKLYNLVYPGKLTKLI 613
+ + F D +LVG+S+G I + ++P LI
Sbjct: 534 ELLRDFIVDVVKEPVHLVGNSIGGYICSITASLWPSLARSLI 575
>07_03_0690 -
20714691-20714922,20715498-20715572,20715914-20716006,
20716177-20716209,20717521-20717710,20717992-20718061,
20718215-20718370,20718529-20718555
Length = 291
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 289 DVRGGLGRLLQSPGSALP-WPSRLRDQLPPSNQIDAREILFY 411
D GGLGRL+ +P + P SR + P + +D R ++F+
Sbjct: 103 DDMGGLGRLVHTPVAGTPGGKSRRLGRQPAAPWLDPRRVVFF 144
>02_05_0450 -
29117826-29118212,29118307-29118733,29119158-29119296,
29119426-29119530,29119624-29119705
Length = 379
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 326 PVLLCHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKSDR 448
P++L HG SA +R I + +K+ IDL G G S++
Sbjct: 94 PIVLIHGFGASAFHWRYNIPELAKKYKVYAIDLLGFGWSEK 134
>06_03_0725 -
23894215-23894412,23894660-23894803,23895058-23895126,
23895197-23895267,23895357-23895444,23895522-23895707,
23895805-23895903,23896002-23896082,23896575-23896634,
23896656-23896779,23897026-23897120,23897205-23897331,
23897559-23897662,23897883-23897945
Length = 502
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Frame = +2
Query: 323 PPVLLCHGLADS-ATSFRPLIKLMPEKFYFIGIDLPGCGKSDRFPPGL-MINIYDLVYAV 496
P V+ CHG + A + + L+P +D G G S L DL AV
Sbjct: 47 PCVIYCHGNSGCRADANEAAVILLPSNITLFTLDFAGSGLSGGEYVSLGWHEKQDLKCAV 106
Query: 497 NAVAKHFRWDAFNLVGHSLGAIIGKLYNLVYP 592
+ + + L G S+GA+ LY P
Sbjct: 107 SFLRNNKEVSCIGLWGRSMGAVTSLLYGAEDP 138
>07_01_0614 - 4545306-4545833
Length = 175
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 263 WYIQVPWGRMCVVAWGDCCNPPVLLC 340
W+ +PW R A D C+P + LC
Sbjct: 114 WFPNIPWDRQPFSALRDLCDPFLALC 139
>03_06_0497 - 34332310-34334415
Length = 701
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 365 WSRSLLGHGRAEPGDCSNRPKPPRTSGPKEPVCTILFL 252
WS L G GRA+ D + P+ P S PK+ + ++ L
Sbjct: 273 WSFRLGGGGRAQDLDLAKLPRLPSPSKPKKTLPPLIIL 310
>03_02_0068 + 5390004-5390425,5390517-5390949
Length = 284
Score = 28.7 bits (61), Expect = 4.2
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = +2
Query: 329 VLLCHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGK--SDRFPPGLMINIYDLVYAVNA 502
V+L HG +++ ++ + + DL G D F N+ V + A
Sbjct: 38 VVLSHGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAGSVNPDHFDFRRYDNLDAYVDDLLA 97
Query: 503 VAKHFRWDAFNLVGHSLGAIIGKLYNLVYPGKLTKLIEI 619
+ R VGHS+ A+IG L ++ P KL+ I
Sbjct: 98 ILDALRIPRCAFVGHSVSAMIGILASIRRPDLFAKLVLI 136
>09_06_0145 + 21162308-21163666
Length = 452
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/53 (28%), Positives = 20/53 (37%)
Frame = +1
Query: 346 PSRLRDQLPPSNQIDAREILFYRHRPPGLRQVGPVPAGPDDQHIRSGVRCERG 504
P R + PP + + R + +YR PP G V QH G G
Sbjct: 187 PGMFRPRDPPLVEFEHRGVEYYRPPPPAAGVDGDVGGDHKQQHGHGGEEASHG 239
>01_06_0985 - 33594588-33595451,33597655-33598518
Length = 575
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Frame = -1
Query: 375 GRKLVAESARP---WQSRTGGLQQSPQATTHIRPQGTCMYHSFSN 250
G + AE RP W+ G Q+ HI+ G C + F N
Sbjct: 450 GNVVTAEVRRPLMLWRQPKGATQEEVLVVEHIQTDGVCKFDVFVN 494
>01_01_0780 - 6036454-6037992
Length = 512
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 428 GCGKSDRFPPG-LMINIYDLVYAVNAVAKHFRWDAFNLVGHSLGAIIGKLYNLVY 589
G G + F G LM+ I D + A + R DAF+LVGH G + +NL+Y
Sbjct: 78 GAGLTADFLFGRLMVFIRDSELSRRVFA-NVRADAFHLVGHPFGKKLFGDHNLIY 131
>05_06_0254 -
26706830-26706943,26707063-26707193,26707330-26707417,
26707970-26708087,26708184-26708332,26708787-26708840,
26708963-26709031,26709146-26709246,26709391-26709473,
26709846-26710041,26710171-26710279
Length = 403
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/64 (25%), Positives = 27/64 (42%)
Frame = +2
Query: 419 DLPGCGKSDRFPPGLMINIYDLVYAVNAVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPGK 598
D G G+S P + + A+ H W ++ GHS+GA+I + P +
Sbjct: 85 DNRGVGRSSVLPHKSYYSTVIMARDALALMDHLGWKKAHVFGHSMGAMISCKLAAMAPHR 144
Query: 599 LTKL 610
+ L
Sbjct: 145 ICSL 148
>02_05_0504 - 29590852-29591862
Length = 336
Score = 27.9 bits (59), Expect = 7.4
Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 6/82 (7%)
Frame = -2
Query: 524 PNENASRPRSQRTPDRIC*SSGPAGTGPTCRSPGGLCL*NKISRASI*LEGGSWSRSLLG 345
P + S+ +PD+ G G GG S A + +EGGS S G
Sbjct: 36 PTSHVKMEHSKMSPDKSPVGEGDHAGGSGSGGVGGDH--QPSSSAMVPVEGGSGSAGGSG 93
Query: 344 HG------RAEPGDCSNRPKPP 297
G R P N+PKPP
Sbjct: 94 SGGPTRRPRGRPPGSKNKPKPP 115
>10_01_0129 + 1535823-1537196
Length = 457
Score = 27.5 bits (58), Expect = 9.7
Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = -2
Query: 461 GPAGTGPTCRSPGGLCL*NKISRASI*LE-GGSWSRSLLGHGRAEPGDCSNRPKPPRTSG 285
G G P PGG N R+S GS S G R+ P D +P PPR
Sbjct: 15 GGGGGAPRGSPPGGGSPLNSSRRSSRRPRPSGSSPTSSPGQIRSPPDDGDGQPPPPRRRR 74
Query: 284 PKEP 273
EP
Sbjct: 75 RGEP 78
>06_02_0342 +
14789190-14789205,14789868-14789891,14789968-14790128,
14790218-14790335,14790658-14790735,14790819-14790938,
14791380-14791430,14791576-14791883
Length = 291
Score = 27.5 bits (58), Expect = 9.7
Identities = 24/101 (23%), Positives = 43/101 (42%)
Frame = -1
Query: 582 RLYNLPMMAPSEWPTRLKASQRKCFATAFTAYTRSYMLIIRPGGNRSDLPQPGRSMPIK* 403
R + +P MAP + + T+F A + YM +++ G +L R P
Sbjct: 148 RPHMIPQMAPDVATSHWQGGFAPFAGTSFGAGVQGYMDLLQQGSYCPELMSGFR--PYTA 205
Query: 402 NFSGINLIRGRKLVAESARPWQSRTGGLQQSPQATTHIRPQ 280
++ I+ G S+ P + R ++PQAT +P+
Sbjct: 206 SYGDISSFDG----GSSSVPDELRASQTNEAPQATQPTQPE 242
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,178,089
Number of Sequences: 37544
Number of extensions: 370811
Number of successful extensions: 1194
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -