Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5c16
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88315-14|AAB42366.2| 355|Caenorhabditis elegans Hypothetical p... 53 2e-07
U88315-13|AAN84844.1| 359|Caenorhabditis elegans Hypothetical p... 49 3e-06
U88315-12|AAB42367.1| 444|Caenorhabditis elegans Hypothetical p... 49 3e-06
U00052-2|AAK95881.1| 404|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z71181-5|CAA94898.1| 355|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z81038-8|CAB02763.1| 328|Caenorhabditis elegans Hypothetical pr... 31 0.70
U39674-1|AAA80413.2| 137|Caenorhabditis elegans Hypothetical pr... 31 0.70
AC024205-2|AAF36046.1| 308|Caenorhabditis elegans Hypothetical ... 31 0.93
AF077529-2|AAC26254.1| 292|Caenorhabditis elegans Hypothetical ... 30 1.2
U64852-7|AAB04970.1| 452|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81105-4|CAB03219.1| 299|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z70208-4|CAC42306.1| 879|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF200707-1|AAF15884.1| 879|Caenorhabditis elegans UNC-84B protein. 28 6.6
AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein. 28 6.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 27 8.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 27 8.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 27 8.7
>U88315-14|AAB42366.2| 355|Caenorhabditis elegans Hypothetical
protein C37H5.2 protein.
Length = 355
Score = 52.8 bits (121), Expect = 2e-07
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = +2
Query: 326 PVLLCHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKSDR--FPPGLMINIYDLVYAVN 499
P++L HG + IK + + IDLPG G+S R F +++ A+
Sbjct: 73 PIVLIHGFGAGVALWGSAIKRLAQFQNVYAIDLPGFGRSSRTKFSTDPETAEKEMIEAIE 132
Query: 500 AVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPGKLTKLIEIDPINF 634
+ NLVGHS G + Y L YP ++ LI DP F
Sbjct: 133 QWRVKMNLEKMNLVGHSFGGYLSTSYALKYPKRIENLILADPWGF 177
>U88315-13|AAN84844.1| 359|Caenorhabditis elegans Hypothetical
protein C37H5.3b protein.
Length = 359
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = +2
Query: 326 PVLLCHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKSDR--FPPGLMINIYDLVYAVN 499
P++L HG + IK + + DLPG G+S R F +++ ++
Sbjct: 77 PIVLIHGFGAGVALWGSAIKRLAQFQTVHAFDLPGFGRSSRPKFSSDPETAETEMIDSIE 136
Query: 500 AVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPGKLTKLIEIDPINF 634
+ NLVGHS G + Y L YP ++ LI DP F
Sbjct: 137 QWRDKMNLEKMNLVGHSFGGYLATSYALKYPKRVENLILADPWGF 181
>U88315-12|AAB42367.1| 444|Caenorhabditis elegans Hypothetical
protein C37H5.3a protein.
Length = 444
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = +2
Query: 326 PVLLCHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKSDR--FPPGLMINIYDLVYAVN 499
P++L HG + IK + + DLPG G+S R F +++ ++
Sbjct: 162 PIVLIHGFGAGVALWGSAIKRLAQFQTVHAFDLPGFGRSSRPKFSSDPETAETEMIDSIE 221
Query: 500 AVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPGKLTKLIEIDPINF 634
+ NLVGHS G + Y L YP ++ LI DP F
Sbjct: 222 QWRDKMNLEKMNLVGHSFGGYLATSYALKYPKRVENLILADPWGF 266
>U00052-2|AAK95881.1| 404|Caenorhabditis elegans Hypothetical
protein K02F3.6 protein.
Length = 404
Score = 39.1 bits (87), Expect = 0.003
Identities = 30/116 (25%), Positives = 51/116 (43%)
Frame = +2
Query: 266 YIQVPWGRMCVVAWGDCCNPPVLLCHGLADSATSFRPLIKLMPEKFYFIGIDLPGCGKSD 445
YI++ R+ V G P +L HG + S+R +K +K+ + ID G SD
Sbjct: 121 YIKLKKVRLHYVQTGSDDKPLMLFIHGYPEFWYSWRFQLKEFADKYRCVAIDQRGYNLSD 180
Query: 446 RFPPGLMINIYDLVYAVNAVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPGKLTKLI 613
+ +I +L + V + +D +V H G ++ + YP + KLI
Sbjct: 181 KPKHVDNYSIDELTGDIRDVIEGLGYDKAIVVAHDWGGLVAWQFAEQYPEMVDKLI 236
>Z71181-5|CAA94898.1| 355|Caenorhabditis elegans Hypothetical
protein K07C5.5 protein.
Length = 355
Score = 31.9 bits (69), Expect = 0.40
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 4/123 (3%)
Frame = +2
Query: 257 KEW---YIQVPWGRMCVVAWGDCCNPPVLLCHGLADSATSFRPLIKLMPEKFYFIGIDLP 427
K W ++Q+ RM V G +L+ HG + S+R ++ I ID+
Sbjct: 52 KNWNHKFVQLKNIRMHYVEEGPADGDVLLMVHGFPEFWYSWRFQLEHFKHTHRCIAIDMR 111
Query: 428 GCGKSDRFPPGLM-INIYDLVYAVNAVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPGKLT 604
G +DR P G+ N+ LV + + L H GAI+ +++ +
Sbjct: 112 GYNTTDR-PSGISDYNLTHLVEDIRQFIEILELKRVTLAAHDWGAIVCWRVAMLHSNLID 170
Query: 605 KLI 613
+L+
Sbjct: 171 RLV 173
>Z81038-8|CAB02763.1| 328|Caenorhabditis elegans Hypothetical
protein C25A1.12 protein.
Length = 328
Score = 31.1 bits (67), Expect = 0.70
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +2
Query: 428 GCGKSDR--FPPGLMINIYDLVYAVNAVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPGKL 601
G G+S R F I ++V + K + ++GH+ G + Y L P ++
Sbjct: 150 GFGRSSRSRFSDDNAIAELEMVEVMEDWRKAMGIEKMYIIGHAFGGYLASAYALENPSRV 209
Query: 602 TKLIEIDPINF 634
LI +DP F
Sbjct: 210 AHLILVDPWGF 220
>U39674-1|AAA80413.2| 137|Caenorhabditis elegans Hypothetical
protein C06E2.5 protein.
Length = 137
Score = 31.1 bits (67), Expect = 0.70
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Frame = +1
Query: 208 KFVKFLKNYFR--NEFIRKRMVHTGSLGPDVRGGLGRLLQSPGSAL-----PWPSRLRDQ 366
KF L++Y R NEFIR+ VH + G ++Q P +A+ P R R
Sbjct: 42 KFAITLQSYIRRRNEFIRRMRVH--EMREQAEAGPSEIVQQPSNAVGATEEPAAKRARTD 99
Query: 367 LPPSNQIDAREI 402
P N+ + E+
Sbjct: 100 TPEPNKENTTEV 111
>AC024205-2|AAF36046.1| 308|Caenorhabditis elegans Hypothetical
protein Y73C8B.3 protein.
Length = 308
Score = 30.7 bits (66), Expect = 0.93
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +2
Query: 329 VLLCHGLADSATSFRPL-IKLMPEKFYFIGIDLPGCGKSDRFPPGLMINIYDLVYAVNAV 505
V+ HG S F+ + KL K FIG++ PG ++ +P INI Y+ NA+
Sbjct: 40 VVAFHGSPGSHNDFKYIRSKLDDLKIRFIGVNYPGFTFTNEYPDQKHINIERQNYS-NAL 98
Query: 506 AKHFRWDA-FNLVGHSLG 556
D +GHS G
Sbjct: 99 LDELGIDGKMAYIGHSRG 116
>AF077529-2|AAC26254.1| 292|Caenorhabditis elegans Hypothetical
protein C09E8.2a protein.
Length = 292
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +2
Query: 326 PVLLCHGLADSATSFRPLIKLMPEKFYFIGIDLPGC--GKSDRFPPGLM---INIYDLVY 490
PV++ HG+ + A+ F + + K Y ++ G G S R P GL+ N +
Sbjct: 65 PVIIVHGITNKASRFGGTVAYLKSKGY-KNSEIYGTTWGDSGRTPVGLVDMKCNYVKQIR 123
Query: 491 AVNAVAKHFRWDAFNLVGHSLGAIIGK 571
A+ + + +++G+S+G+ + +
Sbjct: 124 AMIIAVRQYTGQKVDVIGYSMGSPLAR 150
>U64852-7|AAB04970.1| 452|Caenorhabditis elegans Hypothetical
protein W01A11.1 protein.
Length = 452
Score = 29.5 bits (63), Expect = 2.1
Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 10/105 (9%)
Frame = +2
Query: 326 PVLLCHGLADSATSFRPLIKLM--PEK--------FYFIGIDLPGCGKSDRFPPGLMINI 475
P+L+ HG + F I L+ P+K F I +PG G SD+ P +
Sbjct: 144 PILVAHGWPGNVFEFYKFIPLLTDPKKHGIDSDFAFEVIAPSIPGYGWSDQ-PKKTGFSQ 202
Query: 476 YDLVYAVNAVAKHFRWDAFNLVGHSLGAIIGKLYNLVYPGKLTKL 610
+ ++ F L G GAII L VYP + L
Sbjct: 203 LACARVFRKLMLRLGYNKFYLQGGDWGAIITSLLTKVYPQNVMAL 247
>Z81105-4|CAB03219.1| 299|Caenorhabditis elegans Hypothetical
protein R05D7.4 protein.
Length = 299
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Frame = +2
Query: 320 NPPVLLCHGLADSATSFRPLIKLMPEKFY--FIGIDLPGCGKSDRFPPGLMINIY-DLVY 490
N P+++ HGL ++ + K + +K +D+ G S + DLV
Sbjct: 45 NSPLVIVHGLFGQKQNWNSVGKALHKKLEAPVYAVDVRNHGSSPHTETMSYTEMAEDLVL 104
Query: 491 AVNAVAKHFRWDAFNLVGHSLGAII 565
++ V + + NL+GHS+G I
Sbjct: 105 FIDKVKEETKKTRVNLLGHSMGGKI 129
>Z70208-4|CAC42306.1| 879|Caenorhabditis elegans Hypothetical
protein F54B11.3b protein.
Length = 879
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 449 FPPGLMINIYDLVYAVNAVAKHFRWDAFNLVGHSLGAIIGKLYNLV 586
F G+ Y+ +YA A +F D + + + A+ GK+YN V
Sbjct: 715 FGTGITNIFYNFIYAPIAGVFNFAGDNYMYFFNEVAAVFGKVYNSV 760
>Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical
protein F54B11.3a protein.
Length = 1111
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 449 FPPGLMINIYDLVYAVNAVAKHFRWDAFNLVGHSLGAIIGKLYNLV 586
F G+ Y+ +YA A +F D + + + A+ GK+YN V
Sbjct: 715 FGTGITNIFYNFIYAPIAGVFNFAGDNYMYFFNEVAAVFGKVYNSV 760
>AF200707-1|AAF15884.1| 879|Caenorhabditis elegans UNC-84B protein.
Length = 879
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 449 FPPGLMINIYDLVYAVNAVAKHFRWDAFNLVGHSLGAIIGKLYNLV 586
F G+ Y+ +YA A +F D + + + A+ GK+YN V
Sbjct: 715 FGTGITNIFYNFIYAPIAGVFNFAGDNYMYFFNEVAAVFGKVYNSV 760
>AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein.
Length = 1111
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 449 FPPGLMINIYDLVYAVNAVAKHFRWDAFNLVGHSLGAIIGKLYNLV 586
F G+ Y+ +YA A +F D + + + A+ GK+YN V
Sbjct: 715 FGTGITNIFYNFIYAPIAGVFNFAGDNYMYFFNEVAAVFGKVYNSV 760
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 362 SRSLLGHGRAEPGDCSNRPKPPRTSGPKEP 273
S L G G P + P PPRT P P
Sbjct: 246 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 275
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 362 SRSLLGHGRAEPGDCSNRPKPPRTSGPKEP 273
S L G G P + P PPRT P P
Sbjct: 267 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 296
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 362 SRSLLGHGRAEPGDCSNRPKPPRTSGPKEP 273
S L G G P + P PPRT P P
Sbjct: 252 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 281
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,512,209
Number of Sequences: 27780
Number of extensions: 299005
Number of successful extensions: 824
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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