Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5c13
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    26   0.35 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    25   0.61 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    24   1.4  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    24   1.4  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    24   1.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.5  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   3.3  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   4.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.7  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   5.7  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   7.5  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   7.5  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   9.9  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +1

Query: 445 LRIGFTARMVSDRKCRDGKRNMSTSRLLVKFHLKNQLNRIVLRST 579
           +RI   ARM++ +   D +   +   LL +FH    ++ I LRS+
Sbjct: 355 VRICLDARMINSKMIADCESPPAADELLRRFHEIRYMSTIDLRSS 399


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 9/41 (21%), Positives = 22/41 (53%)
 Frame = -1

Query: 488 HFRSETILAVNPILNIVESVTFDIVTSWTQIGSHFSNVSLH 366
           HF    ++ +N I+++   + +   + + + G+H   +SLH
Sbjct: 672 HFLFHIVIGMNLIIHVGTQLIYRPFSHFPRCGNHLPPISLH 712


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 94  QHHTYHERLYDVAIMDGIH 150
           QHH  HE  Y + +  G H
Sbjct: 127 QHHFLHENKYQLEVDSGYH 145


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 94  QHHTYHERLYDVAIMDGIH 150
           QHH  HE  Y + +  G H
Sbjct: 127 QHHFLHENKYQLEVDSGYH 145


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 94  QHHTYHERLYDVAIMDGIH 150
           QHH  HE  Y + +  G H
Sbjct: 127 QHHFLHENKYQLEVDSGYH 145


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +3

Query: 414 YDIKRDAFYDVENRIYSKNGLGSKVP-RW 497
           + + RD + D    +Y KNG G K+P RW
Sbjct: 636 FGLSRDVYQD---NVYCKNG-GGKLPVRW 660


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
 Frame = +1

Query: 403 VQEVTISNVTLS-----TMLRIGFTARMVSDRKCRDGKRNMSTSRLLVKFHLKNQLNRIV 567
           V++V +SN  +      TM R G+TA M    K +  +   +   +  K HL+   +  +
Sbjct: 572 VEKVVVSNRLVESPCCITMRRYGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDPSI 631

Query: 568 LRSTQLRNERE 600
           L++ + + E +
Sbjct: 632 LKNLRQKAEAD 642


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/33 (30%), Positives = 12/33 (36%)
 Frame = +3

Query: 477 GSKVPRWKTKHEYQPPAREVPPEKPAEQNCAPF 575
           G K   WK + +   P   V PE        PF
Sbjct: 103 GPKRKTWKVEEDSPSPTSSVSPEVKDSSRDRPF 135


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory
          receptor candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 3  KIY*FMTFICIQSVFAISNYFLKY 74
          +I+ F+TF C +S F  S   + Y
Sbjct: 22 QIFGFVTFTCTRSNFRSSKLLILY 45


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 3   KIY*FMTFICIQSVFAISNYFLKY 74
           +I+ F+TF C +S F  S   + Y
Sbjct: 40  QIFGFVTFTCTRSNFRSSKLLILY 63


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 6   IY*FMTFICIQSVFAISNYF 65
           ++ F+T +  Q+VFA+ N F
Sbjct: 450 LFVFLTNMTFQNVFAVINVF 469


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 6   IY*FMTFICIQSVFAISNYF 65
           ++ F+T +  Q+VFA+ N F
Sbjct: 450 LFVFLTNMTFQNVFAVINVF 469


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = -1

Query: 464 AVNPILNIVESVTFDIVTSWTQI 396
           A++ +L+++  +T+D   SW  +
Sbjct: 188 AMSNVLDVINVMTYDFHGSWAGV 210


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,642
Number of Sequences: 336
Number of extensions: 4091
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)