Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5c12
(740 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical... 103 1e-22
Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical pr... 95 5e-20
Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical pr... 95 5e-20
AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical ... 92 4e-19
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 92 4e-19
AF099003-2|AAC68743.2| 454|Caenorhabditis elegans Hypothetical ... 86 3e-17
AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical... 84 9e-17
AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical... 84 9e-17
AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical... 84 9e-17
AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical ... 76 3e-14
AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical ... 76 3e-14
Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical pr... 75 5e-14
Z78413-12|CAB01666.3| 448|Caenorhabditis elegans Hypothetical p... 72 4e-13
Z78411-5|CAB01647.3| 448|Caenorhabditis elegans Hypothetical pr... 72 4e-13
Z71267-9|CAA95852.2| 380|Caenorhabditis elegans Hypothetical pr... 65 6e-11
Z71262-14|CAN99672.1| 380|Caenorhabditis elegans Hypothetical p... 65 6e-11
U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z68134-1|CAA92226.2| 492|Caenorhabditis elegans Hypothetical pr... 35 0.053
AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical ... 31 0.65
AC084161-2|AAK29732.3| 782|Caenorhabditis elegans Hypothetical ... 31 0.86
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 28 6.0
AF078790-2|AAC26940.1| 215|Caenorhabditis elegans Hypothetical ... 28 8.0
>AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical
protein Y18H1A.9 protein.
Length = 488
Score = 103 bits (247), Expect = 1e-22
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 15/214 (7%)
Frame = +3
Query: 138 VWEVRFIREGQRRFVKSLDTHGA-ITIWK---EENSTMDIMVDGPRITQIAGMLHEREIP 305
VW V+ + Q + +L + + WK E + +M+ + Q L + I
Sbjct: 23 VWRVQPTTQDQVDILHNLYLNDVKLDFWKSPSEAGKEVHVMISDEKTQQFMKELDDHSIK 82
Query: 306 YSIAIGDVGSVL--SREQGIKYSKNNRKPNYCEM----DWHNYHRLHVIYAFMENLSHEY 467
+S+ I DV V+ +E+ K K R ++ E + YH + ++ +L+ Y
Sbjct: 83 HSVMIDDVQKVIVEQKEKRDKLRKQVRLHDWREQKVQFNLAQYHSFADVINYLNSLAITY 142
Query: 468 PYLCSVAVIGKSAEGRDIKILKVSNGNEYNV--GVWLDAAIHPREWISTAVVTYIADRLV 641
P L SV IG + EGR I ++K++N G+W+D IH REW+S + V Y +LV
Sbjct: 143 PELVSVQPIGTTHEGRQIPLIKITNKRNGGTKRGIWVDGGIHAREWVSPSTVLYFIHQLV 202
Query: 642 RTFHEQ---PDCVTNKDWYILPVLNPDGYEYTHT 734
+ + V +WYI+P+LNPDGYEY+ +
Sbjct: 203 TQYDKDVQIKQFVDQLEWYIVPLLNPDGYEYSRS 236
>Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical
protein ZC434.9b protein.
Length = 532
Score = 95.1 bits (226), Expect = 5e-20
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 15/180 (8%)
Frame = +3
Query: 240 DIMVDGPRITQIAGMLHEREIPYSIAIGDVGS-VLSREQG------IKYSK--NNRKPNY 392
DIMVD R+ + +L I Y + I DVG +L +E G + +SK +N N
Sbjct: 74 DIMVDEDRMEWLDSVLKNSNISYDVIIEDVGKLILEKEHGPPRFSNLLFSKRMHNEGGNR 133
Query: 393 CEMDWHNYHRLHVIYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILKVSN---GNEYNVG 563
+ YH I +M+++ +YP V +G ++EGR I+ +K+ + N+ +
Sbjct: 134 ARYGFGEYHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQGIKIGSQVWRNDKRI- 192
Query: 564 VWLDAAIHPREWISTAVVTYIADRLVRTFHEQP---DCVTNKDWYILPVLNPDGYEYTHT 734
W+D IH REW + + DRL+ +++ V ++YILPV NPDGYEY+ +
Sbjct: 193 FWIDGGIHAREWAAVHTALWFIDRLIADYNDDSLVRAAVDRLNFYILPVANPDGYEYSRS 252
>Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical
protein ZC434.9a protein.
Length = 581
Score = 95.1 bits (226), Expect = 5e-20
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 15/180 (8%)
Frame = +3
Query: 240 DIMVDGPRITQIAGMLHEREIPYSIAIGDVGS-VLSREQG------IKYSK--NNRKPNY 392
DIMVD R+ + +L I Y + I DVG +L +E G + +SK +N N
Sbjct: 74 DIMVDEDRMEWLDSVLKNSNISYDVIIEDVGKLILEKEHGPPRFSNLLFSKRMHNEGGNR 133
Query: 393 CEMDWHNYHRLHVIYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILKVSN---GNEYNVG 563
+ YH I +M+++ +YP V +G ++EGR I+ +K+ + N+ +
Sbjct: 134 ARYGFGEYHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQGIKIGSQVWRNDKRI- 192
Query: 564 VWLDAAIHPREWISTAVVTYIADRLVRTFHEQP---DCVTNKDWYILPVLNPDGYEYTHT 734
W+D IH REW + + DRL+ +++ V ++YILPV NPDGYEY+ +
Sbjct: 193 FWIDGGIHAREWAAVHTALWFIDRLIADYNDDSLVRAAVDRLNFYILPVANPDGYEYSRS 252
>AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical
protein T06A4.1a protein.
Length = 579
Score = 91.9 bits (218), Expect = 4e-19
Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 6/165 (3%)
Frame = +3
Query: 252 DGPRITQIAGMLHEREIPYSIAIGDVGSVLSREQGIKYSKNNRKPNYCEMDWHNYHRLHV 431
D PR + L ++I Y +A+ D+ + E+G S P + Y+ L
Sbjct: 81 DAPRFVKD---LESKKISYIVAVNDLSKAIENERG---SDKFYNP-VAGFAYDKYNSLEE 133
Query: 432 IYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILKVS---NGNEYNVGVWLDAAIHPREWI 602
I M+ L EYP + ++ IG+S E R + ++K++ N + +W+DA IH REWI
Sbjct: 134 IQTEMKRLKKEYPTMITLIDIGQSHENRTLLVMKITGKRNPLGSKISMWIDAGIHAREWI 193
Query: 603 STAVVTYIADRLVRTFHEQ---PDCVTNKDWYILPVLNPDGYEYT 728
+ A YIA L+ + + + D+YILPV+NPDGYEY+
Sbjct: 194 APATAMYIAHELLLGYENDATVAKLMDHIDFYILPVMNPDGYEYS 238
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 91.9 bits (218), Expect = 4e-19
Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 6/165 (3%)
Frame = +3
Query: 252 DGPRITQIAGMLHEREIPYSIAIGDVGSVLSREQGIKYSKNNRKPNYCEMDWHNYHRLHV 431
D PR + L ++I Y +A+ D+ + E+G S P + Y+ L
Sbjct: 81 DAPRFVKD---LESKKISYIVAVNDLSKAIENERG---SDKFYNP-VAGFAYDKYNSLEE 133
Query: 432 IYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILKVS---NGNEYNVGVWLDAAIHPREWI 602
I M+ L EYP + ++ IG+S E R + ++K++ N + +W+DA IH REWI
Sbjct: 134 IQTEMKRLKKEYPTMITLIDIGQSHENRTLLVMKITGKRNPLGSKISMWIDAGIHAREWI 193
Query: 603 STAVVTYIADRLVRTFHEQ---PDCVTNKDWYILPVLNPDGYEYT 728
+ A YIA L+ + + + D+YILPV+NPDGYEY+
Sbjct: 194 APATAMYIAHELLLGYENDATVAKLMDHIDFYILPVMNPDGYEYS 238
>AF099003-2|AAC68743.2| 454|Caenorhabditis elegans Hypothetical
protein Y59C2A.1 protein.
Length = 454
Score = 85.8 bits (203), Expect = 3e-17
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 15/193 (7%)
Frame = +3
Query: 207 ITIWKE---ENSTMDIMVDGPRITQIAGMLHEREIP-YSIAIGDVGSVLSREQG--IKYS 368
I IW E +N DI+V + + +L E+ + GD+ S ++ E+ I+ S
Sbjct: 69 IDIWAEPSKQNPYADILVAPEFLQKFKSLLTSAELSTLKMLEGDIQSQINAERHAMIRNS 128
Query: 369 KNNRK---PNYCEMDWHNYHRLHVIYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILKV- 536
RK + E D + YH + + FM+ LS + + + + S+EGR I +K+
Sbjct: 129 VRRRKRAMKTWQEFDTNAYHSYNEMVEFMKLLSEQKSDMVEMVKVATSSEGRSIYGVKIH 188
Query: 537 --SNGNEYNVGVWLDAAIHPREWISTAVVTYIADRLVRTFHEQPDCVTNK---DWYILPV 701
+ +DA +H REWI+ AV ++ ++V + P N DWYI+P
Sbjct: 189 PPGPSPPEKPSIIVDAGVHAREWIAPAVGLFMIRKIVEEYGRNPQVTANLQKFDWYIMPQ 248
Query: 702 LNPDGYEYTHTHD 740
+NPDGYEY+ T D
Sbjct: 249 VNPDGYEYSRTTD 261
>AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical
protein Y47G6A.19b protein.
Length = 438
Score = 84.2 bits (199), Expect = 9e-17
Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 14/183 (7%)
Frame = +3
Query: 228 NSTMDIMVDGPRITQIAGMLHEREIPYSIAIGDVGSVLSREQGIKYSKNNR-----KPNY 392
N T+DIMV Q L + + +AI D+ +L ++G + +N K +
Sbjct: 23 NGTVDIMVAPEHTDQFRQYLEKHGYTFQVAIDDLHKLLIEKEGNLSTHSNDDAFFLKRLH 82
Query: 393 CEMDWHN------YHRLHVIYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILKVSNGNEY 554
++ +H+ Y+ V+ ++E ++ P + + +G + EGRDI LK
Sbjct: 83 DDVGFHSRLRMGEYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLKFGKDTPD 142
Query: 555 NVGVWLDAAIHPREWISTAVVTYIADRLVRTFHEQP---DCVTNKDWYILPVLNPDGYEY 725
V +DA IH REW + +Y + +V E P + + N YI+PVLNPDGYEY
Sbjct: 143 KKIVVIDAGIHAREWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGYEY 202
Query: 726 THT 734
T T
Sbjct: 203 TRT 205
>AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.19a protein.
Length = 468
Score = 84.2 bits (199), Expect = 9e-17
Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 14/183 (7%)
Frame = +3
Query: 228 NSTMDIMVDGPRITQIAGMLHEREIPYSIAIGDVGSVLSREQGIKYSKNNR-----KPNY 392
N T+DIMV Q L + + +AI D+ +L ++G + +N K +
Sbjct: 23 NGTVDIMVAPEHTDQFRQYLEKHGYTFQVAIDDLHKLLIEKEGNLSTHSNDDAFFLKRLH 82
Query: 393 CEMDWHN------YHRLHVIYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILKVSNGNEY 554
++ +H+ Y+ V+ ++E ++ P + + +G + EGRDI LK
Sbjct: 83 DDVGFHSRLRMGEYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLKFGKDTPD 142
Query: 555 NVGVWLDAAIHPREWISTAVVTYIADRLVRTFHEQP---DCVTNKDWYILPVLNPDGYEY 725
V +DA IH REW + +Y + +V E P + + N YI+PVLNPDGYEY
Sbjct: 143 KKIVVIDAGIHAREWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGYEY 202
Query: 726 THT 734
T T
Sbjct: 203 TRT 205
>AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical
protein Y47G6A.19c protein.
Length = 464
Score = 84.2 bits (199), Expect = 9e-17
Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 14/183 (7%)
Frame = +3
Query: 228 NSTMDIMVDGPRITQIAGMLHEREIPYSIAIGDVGSVLSREQGIKYSKNNR-----KPNY 392
N T+DIMV Q L + + +AI D+ +L ++G + +N K +
Sbjct: 23 NGTVDIMVAPEHTDQFRQYLEKHGYTFQVAIDDLHKLLIEKEGNLSTHSNDDAFFLKRLH 82
Query: 393 CEMDWHN------YHRLHVIYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILKVSNGNEY 554
++ +H+ Y+ V+ ++E ++ P + + +G + EGRDI LK
Sbjct: 83 DDVGFHSRLRMGEYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLKFGKDTPD 142
Query: 555 NVGVWLDAAIHPREWISTAVVTYIADRLVRTFHEQP---DCVTNKDWYILPVLNPDGYEY 725
V +DA IH REW + +Y + +V E P + + N YI+PVLNPDGYEY
Sbjct: 143 KKIVVIDAGIHAREWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGYEY 202
Query: 726 THT 734
T T
Sbjct: 203 TRT 205
>AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical
protein T06A4.3b protein.
Length = 455
Score = 75.8 bits (178), Expect = 3e-14
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 10/198 (5%)
Frame = +3
Query: 171 RRFVKSLDTHGAITIWK---EENSTMDIMVDGPRITQIAGMLHEREIPYSIAIGDVGSVL 341
+R K+ H + WK +++ D+MVD L +I Y I DV ++
Sbjct: 40 QRLYKNATDHD-LNFWKTGKDKHGFWDVMVDMKNSKYFLDFLQVNDISYIKTIDDVEGLI 98
Query: 342 SREQGIKYSKNN-----RKPNYCEMDWHNYHRLHVIYAFMENLSHEYPYLCSVAVIGKSA 506
++ + K N + D+H Y + +M+ L +YP + IGK+
Sbjct: 99 TKHENNKTLSNMFPRLWDDSSSAHYDFHTYGSYQRMTDWMKQLVVKYPKMVQYISIGKTT 158
Query: 507 EGRDIKILKVSNGNEYNVGVWLDAAIHPREWISTAVVTYIADRLVRTFHEQ--PDCVTNK 680
EGR+I +++ + W+D IH REW + + +L +E +
Sbjct: 159 EGRNIDGVEIGGDSRTKKIFWIDGGIHAREWAAPHTALFFIHQLTSRANEPGIKKLLNEI 218
Query: 681 DWYILPVLNPDGYEYTHT 734
+ ++P LNPDGYE+T +
Sbjct: 219 TFVVVPCLNPDGYEFTRS 236
>AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical
protein T06A4.3a protein.
Length = 505
Score = 75.8 bits (178), Expect = 3e-14
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 10/198 (5%)
Frame = +3
Query: 171 RRFVKSLDTHGAITIWK---EENSTMDIMVDGPRITQIAGMLHEREIPYSIAIGDVGSVL 341
+R K+ H + WK +++ D+MVD L +I Y I DV ++
Sbjct: 40 QRLYKNATDHD-LNFWKTGKDKHGFWDVMVDMKNSKYFLDFLQVNDISYIKTIDDVEGLI 98
Query: 342 SREQGIKYSKNN-----RKPNYCEMDWHNYHRLHVIYAFMENLSHEYPYLCSVAVIGKSA 506
++ + K N + D+H Y + +M+ L +YP + IGK+
Sbjct: 99 TKHENNKTLSNMFPRLWDDSSSAHYDFHTYGSYQRMTDWMKQLVVKYPKMVQYISIGKTT 158
Query: 507 EGRDIKILKVSNGNEYNVGVWLDAAIHPREWISTAVVTYIADRLVRTFHEQ--PDCVTNK 680
EGR+I +++ + W+D IH REW + + +L +E +
Sbjct: 159 EGRNIDGVEIGGDSRTKKIFWIDGGIHAREWAAPHTALFFIHQLTSRANEPGIKKLLNEI 218
Query: 681 DWYILPVLNPDGYEYTHT 734
+ ++P LNPDGYE+T +
Sbjct: 219 TFVVVPCLNPDGYEFTRS 236
>Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical
protein R11A5.7 protein.
Length = 664
Score = 74.9 bits (176), Expect = 5e-14
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Frame = +3
Query: 441 FMENLSHEYPYLCSVAVIGKSAEGRDIKILKVSNGNEYNV-GVWLDAAIHPREWISTAVV 617
+M + YP + + IG + EG+ I+ LK+ + + VW+D IH REW S+
Sbjct: 170 YMRTIEFYYPRIAKIVRIGATHEGKPIEGLKIGARSSHKKRAVWVDGNIHAREWASSHTA 229
Query: 618 TYIADRLVRTFHEQPDC---VTNKDWYILPVLNPDGYEYTHT 734
Y ++LV + + V D+YI+P LNPDGYEYT T
Sbjct: 230 LYFINQLVSEYGKDAQITNYVDTLDFYIVPCLNPDGYEYTRT 271
>Z78413-12|CAB01666.3| 448|Caenorhabditis elegans Hypothetical
protein F02D8.4 protein.
Length = 448
Score = 72.1 bits (169), Expect = 4e-13
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Frame = +3
Query: 441 FMENLSHEYPYLCSVAVIGKSAEGRDIKILKVSNGNEYNVGVWLDAAIHPREWISTAVVT 620
F+ +L+ +YP + IG S EGR I +++++ VW+DA IH REWIS V
Sbjct: 128 FLNSLAQQYPNDVKLQNIGNSYEGRSITAVRIADDGSSKPIVWIDAGIHAREWISYNVAL 187
Query: 621 YIADRLVRTFHEQP---DCVTNKDWYILPVLNPDGYEYTHTHD 740
Y L+ T QP + + + ++P NPDGYEY+ T+D
Sbjct: 188 Y----LIYTIVSQPAYRNLLDSVQLVVVPNTNPDGYEYSRTND 226
>Z78411-5|CAB01647.3| 448|Caenorhabditis elegans Hypothetical
protein F02D8.4 protein.
Length = 448
Score = 72.1 bits (169), Expect = 4e-13
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Frame = +3
Query: 441 FMENLSHEYPYLCSVAVIGKSAEGRDIKILKVSNGNEYNVGVWLDAAIHPREWISTAVVT 620
F+ +L+ +YP + IG S EGR I +++++ VW+DA IH REWIS V
Sbjct: 128 FLNSLAQQYPNDVKLQNIGNSYEGRSITAVRIADDGSSKPIVWIDAGIHAREWISYNVAL 187
Query: 621 YIADRLVRTFHEQP---DCVTNKDWYILPVLNPDGYEYTHTHD 740
Y L+ T QP + + + ++P NPDGYEY+ T+D
Sbjct: 188 Y----LIYTIVSQPAYRNLLDSVQLVVVPNTNPDGYEYSRTND 226
>Z71267-9|CAA95852.2| 380|Caenorhabditis elegans Hypothetical
protein W01A8.6 protein.
Length = 380
Score = 64.9 bits (151), Expect = 6e-11
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Frame = +3
Query: 441 FMENLSHEYPYLCSVAVIGKSAEGRD---IKILKVSNGNEYNVGVWLDAAIHPREWISTA 611
+++ ++H+ P + IG++ EGR ++I K + + + VWLD H REW +
Sbjct: 44 YIKGVAHDNPSFVQLKTIGRTREGRPLLGVRIGKPALPGKRKIAVWLDGGNHAREWPAFH 103
Query: 612 VVTYIADRLVRTFHEQPDC---VTNKDWYILPVLNPDGYEYTHT 734
V Y ++LV + V D Y+ PVLNPDG+ Y+ T
Sbjct: 104 VAVYFIEKLVNGYLSDDKITKYVETLDIYVFPVLNPDGFVYSRT 147
>Z71262-14|CAN99672.1| 380|Caenorhabditis elegans Hypothetical
protein W01A8.6 protein.
Length = 380
Score = 64.9 bits (151), Expect = 6e-11
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Frame = +3
Query: 441 FMENLSHEYPYLCSVAVIGKSAEGRD---IKILKVSNGNEYNVGVWLDAAIHPREWISTA 611
+++ ++H+ P + IG++ EGR ++I K + + + VWLD H REW +
Sbjct: 44 YIKGVAHDNPSFVQLKTIGRTREGRPLLGVRIGKPALPGKRKIAVWLDGGNHAREWPAFH 103
Query: 612 VVTYIADRLVRTFHEQPDC---VTNKDWYILPVLNPDGYEYTHT 734
V Y ++LV + V D Y+ PVLNPDG+ Y+ T
Sbjct: 104 VAVYFIEKLVNGYLSDDKITKYVETLDIYVFPVLNPDGFVYSRT 147
>U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical
protein F59A3.1 protein.
Length = 1014
Score = 46.4 bits (105), Expect = 2e-05
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Frame = +3
Query: 387 NYCEMDWHNYHRLHVIYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILKVSNG-NEYNV- 560
N ++ HNY+ + A+++ YP + + GKS EGR++ +L +S+ E+ +
Sbjct: 72 NSTKLKNHNYNEMT---AWLKATRLNYPNITHLYSAGKSVEGRELWVLIISDKPKEHKLM 128
Query: 561 --GVWLDAAIHPREWISTAVVTYIADRLVRTFHEQP---DCVTNKDWYILPVLNPDGYE 722
+ + +H E + V Y+A+ L + + D V N +++P +NPDGYE
Sbjct: 129 EPELKIVGNMHGNEVVGREAVLYLAEILCLNYGKNKYLTDLVNNARIHLMPSMNPDGYE 187
>Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical
protein F01D4.4 protein.
Length = 472
Score = 41.1 bits (92), Expect = 8e-04
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Frame = +3
Query: 396 EMDWHNYHRLHVIYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILKVSNGNEYNV----G 563
+ +W +YH + A + ++ + P + ++ IG+S EGR + +++ S ++
Sbjct: 34 DAEWGHYHNQAQLEAKLGEINEKCPEITTLYEIGQSVEGRPLVVIQFSTTPGEHIPTKPE 93
Query: 564 VWLDAAIHPREWISTAVVTYIADRL----VRTFHEQPDCVTNKDWYILPVLNPDGYE 722
V L +H E I ++ A+ L + E + + +ILP +NPDG+E
Sbjct: 94 VKLIGNMHGNEPIGRELLLRFAETLCNGAINNDKEIVQLLNSTSIHILPSMNPDGFE 150
>Z68134-1|CAA92226.2| 492|Caenorhabditis elegans Hypothetical
protein T27A8.1 protein.
Length = 492
Score = 35.1 bits (77), Expect = 0.053
Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Frame = +3
Query: 444 MENLSHEYPYLCSVAVIGKSAEGRDIKILKVSNGNEYNVGVWLD----AAIHPREWISTA 611
+ NL ++P L + G+S +GR++ +L VS + + + A +H E
Sbjct: 68 IHNLHRKFPNLTHIYSAGQSVQGRELWVLVVSRYPIEHRKLIPEFKYVANMHGNEVTGRV 127
Query: 612 VVTYIADRLVRTFHEQ---PDCVTNKDWYILPVLNPDGYEYTHTHD 740
+ +A L+ ++ V + +++P +NPDGYE+ D
Sbjct: 128 FLVSLAHTLLENYNSNLWIRQLVDSTRIHLMPSMNPDGYEHASEGD 173
>AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical
protein C27A12.2 protein.
Length = 625
Score = 31.5 bits (68), Expect = 0.65
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 381 KPNYCEMDWHNYHRLHVIYAFMENLSHEYPYLCS 482
KPN C + ++ + H + M+ +HE PY CS
Sbjct: 97 KPNVCSICNISFSQAHTLKTHMQQHAHEKPYKCS 130
>AC084161-2|AAK29732.3| 782|Caenorhabditis elegans Hypothetical
protein Y92H12A.4 protein.
Length = 782
Score = 31.1 bits (67), Expect = 0.86
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 451 ICHMNTLICARWPLLENLLKDEILRF*RYLMVMNI 555
+C+MN ++ WP L L K+++LR R + N+
Sbjct: 98 LCNMNMILFEVWPFLHLLCKEQLLRLIREAVRQNV 132
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 717 NHPDSVLEVCTNPY*LHNQAAHERSGRVYQQ 625
+H D V PY HNQ+ E SGR ++Q
Sbjct: 353 DHEDIHKRVEIKPYFFHNQSCEECSGRYHRQ 383
>AF078790-2|AAC26940.1| 215|Caenorhabditis elegans Hypothetical
protein F36H12.11 protein.
Length = 215
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +3
Query: 570 LDAAI--HPREWISTAVVTYIADRLVRTFHEQPDC----VTNKDWYILPVLNPDGYEYT 728
LD A+ P++ S A +T++ +L TF++QP N+D+ +NP E T
Sbjct: 110 LDKALAKEPKDTYSVASLTWLEKKLAATFYQQPPSHSYEEANEDFLAAYKVNPKWMENT 168
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,890,503
Number of Sequences: 27780
Number of extensions: 367023
Number of successful extensions: 919
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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