Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5c09
(733 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81106-1|CAB03221.2| 352|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z81117-4|CAB03319.1| 249|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF016430-10|AAB65374.1| 467|Caenorhabditis elegans Hypothetical... 29 3.4
AL110479-6|CAB54354.2| 447|Caenorhabditis elegans Hypothetical ... 29 4.5
AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi dom... 26 6.4
U80443-7|AAB37678.2| 393|Caenorhabditis elegans Coenzyme q (ubi... 28 7.8
U58762-5|AAK39304.2| 496|Caenorhabditis elegans Hypothetical pr... 28 7.8
AJ431373-1|CAD24083.1| 496|Caenorhabditis elegans putative alph... 28 7.8
AC024857-3|AAK31568.6| 611|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z81106-1|CAB03221.2| 352|Caenorhabditis elegans Hypothetical
protein R06C1.2 protein.
Length = 352
Score = 31.9 bits (69), Expect = 0.48
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 651 VEMFHTHQLLLNDIMEGTTMRRGVPCW 731
+E+ + L+ +DIM+ + RRG PCW
Sbjct: 88 LEIIQSFYLIADDIMDNSETRRGKPCW 114
>Z81117-4|CAB03319.1| 249|Caenorhabditis elegans Hypothetical
protein T06E6.10 protein.
Length = 249
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +1
Query: 580 TKCLRRKKI*RQRTFCLQTLWDGASKCSTPTNFYS 684
TKC KK C T D +KC TP NF S
Sbjct: 144 TKCSPGKKCALHTVQCFTTPCDPVAKCETPLNFLS 178
>AF016430-10|AAB65374.1| 467|Caenorhabditis elegans Hypothetical
protein C05C8.7 protein.
Length = 467
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 561 LATILAYKMLEKKENLTPENILLANVMGWCVEMF 662
L ++L YKM E+K+ L PEN L CV+M+
Sbjct: 310 LCSVLNYKMTEQKDYLVPENKLTE-----CVDMY 338
>AL110479-6|CAB54354.2| 447|Caenorhabditis elegans Hypothetical
protein Y105C5B.8 protein.
Length = 447
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 355 RNL*YFCSFSSLFGPVSSACGDLLADWSSLGAMASE 248
R + YFC+F S+F P+ S D+ D L + E
Sbjct: 142 RGVAYFCAFFSIFEPLPSVYKDIQRDGHQLNCSSFE 177
>AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi
domain-containing protein2 protein.
Length = 975
Score = 25.8 bits (54), Expect(2) = 6.4
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 333 LQKYHRFLSTLTPQEMPMATRGLAVSKDQSREFMAVFPDIVRDLTETGK 479
L Y L T++P + T+ + ++ + AV PDI + L TGK
Sbjct: 426 LNFYPMELITISPNQRVRITQQTSSQSQRTTKESAVLPDIRQRLIMTGK 474
Score = 20.6 bits (41), Expect(2) = 6.4
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +3
Query: 468 ETGKHIDVPEASKW 509
ETG+H+ P KW
Sbjct: 514 ETGEHLINPRDCKW 527
>U80443-7|AAB37678.2| 393|Caenorhabditis elegans Coenzyme q
(ubiquinone) biosynthesisprotein 1 protein.
Length = 393
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +3
Query: 519 LLQYNVPNGKKNRGLATILAYKMLEKKENLTPENILLANV--MGWCVEMFHTHQLLLNDI 692
LL N N NR ++ + ++ + + N +G EM HT L+ +D+
Sbjct: 96 LLMGNACNSAANRSISEEYLAMLSTERSGIAAHLSVCQNQYKIGMIAEMIHTASLVHDDV 155
Query: 693 MEGTTMRRG 719
++ RRG
Sbjct: 156 IDEANTRRG 164
>U58762-5|AAK39304.2| 496|Caenorhabditis elegans Hypothetical
protein T27F7.3a protein.
Length = 496
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 497 FRNINV-LASLSEIPDDVRKDSHELPGLVLGNGQSSGSHRHFLRS 366
FR I+V L + +PD+V + + LV G G S RH LRS
Sbjct: 14 FRCISVYLVASWFVPDEVYQSAEVAHHLVYGTGHLSWEWRHSLRS 58
>AJ431373-1|CAD24083.1| 496|Caenorhabditis elegans putative alpha 2
mannosyltransferaseprotein.
Length = 496
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 497 FRNINV-LASLSEIPDDVRKDSHELPGLVLGNGQSSGSHRHFLRS 366
FR I+V L + +PD+V + + LV G G S RH LRS
Sbjct: 14 FRCISVYLVASWFVPDEVYQSAEVAHHLVYGTGHLSWEWRHSLRS 58
>AC024857-3|AAK31568.6| 611|Caenorhabditis elegans Hypothetical
protein Y71G12A.2 protein.
Length = 611
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 432 MAVFPDIVRDLTETGKHIDVPEASKWLAKLLQYNV 536
M++F D+ + L E PE+ KWLA+LL +
Sbjct: 235 MSIFDDLEKLLHEFVLRSGEPESPKWLAQLLNTKI 269
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,093,879
Number of Sequences: 27780
Number of extensions: 408475
Number of successful extensions: 1209
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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