Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5c05
(755 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 30 0.31
SPBC11C11.01 ||SPBC17D1.08|RNA-binding protein|Schizosaccharomyc... 30 0.41
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 30 0.41
SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.72
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 29 0.72
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 29 0.95
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch... 29 0.95
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 29 0.95
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 27 2.2
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 2.2
SPAC140.04 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.2
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 27 2.9
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 27 2.9
SPAC23H3.05c |swd1||COMPASS complex subunit Swd1|Schizosaccharom... 27 2.9
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 27 3.8
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 27 3.8
SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone... 27 3.8
SPBC119.01 |rpn3|SPBPJ4664.07|19S proteasome regulatory subunit ... 27 3.8
SPAC29A4.20 |||RNA polymerase II elongator complex, histone acet... 26 5.0
SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomy... 26 5.0
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 26 6.7
SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 6.7
SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|c... 26 6.7
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 6.7
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 26 6.7
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 25 8.8
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 25 8.8
SPAC644.18c |bet3||TRAPP complex subunit Bet3 |Schizosaccharomyc... 25 8.8
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 25 8.8
SPAC1783.03 |fta2|sma2|Sim4 and Mal2 associated |Schizosaccharom... 25 8.8
SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain p... 25 8.8
SPBC21C3.10c |||5-amino-6-|Schizosaccharomyces pombe|chr 2|||Manual 25 8.8
SPAC11H11.04 |mam2||pheromone p-factor receptor|Schizosaccharomy... 25 8.8
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 30.3 bits (65), Expect = 0.31
Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 2/117 (1%)
Frame = +3
Query: 231 LHHKRSRAPG--VPPVNEDLKEATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKR 404
++ K APG V E L + + +L + E + +T KH+ T + +
Sbjct: 219 INAKTYNAPGSFVYEDAEKLSQLSSSLISSFSEQPKEHSPATSKHEPEETPASPTPSVSA 278
Query: 405 SSSPEVITLTQVGLETKQDTVTPIPVQVASTTDLVAEKIEAVKENDDDSITEEMPEP 575
S+S E T T TP V + + E E D I E++P P
Sbjct: 279 STSRERSTSVAPSFITSDQAATP---DVLKSEEAHVESFSKESEKDQTPIPEDVPSP 332
>SPBC11C11.01 ||SPBC17D1.08|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 493
Score = 29.9 bits (64), Expect = 0.41
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Frame = +3
Query: 276 EDLKEATENLDEIRDRKENERAVSTEKHKHGI----TKKLSSITKKRSSSPEVITLTQVG 443
+DL +A + + + + K + R +S H + L S TK + S + LT++
Sbjct: 181 QDLSDAEQAVQYLSNCKIDGRLISATITNHPKRLPNAEHLESSTKTKDESQDKDKLTKLD 240
Query: 444 LETKQDTVTPIPVQVASTTDLVAEKIEAVKENDDDSITEEMPEPRTSDDPKGSTKWFDDE 623
+ + + + S +L+ +E V N+ IT+ + +D P TK +DD+
Sbjct: 241 RAKLEWLIQGLNCEKGSIGNLLCFAVEHV--NNHVEITDAFLKEFFNDQPTDDTKVYDDD 298
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 29.9 bits (64), Expect = 0.41
Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 2/139 (1%)
Frame = +3
Query: 195 TYRPEL-PESPTELHHKRSRAPG-VPPVNEDLKEATENLDEIRDRKENERAVSTEKHKHG 368
T P++ ++ E+H SR + + + E N + K+N++ + K
Sbjct: 2 TTNPDIVKQTKNEIHQVTSRVQEKLDSKSTNAVEQNNNSSQASVTKDNKKKAAKRAKKKA 61
Query: 369 ITKKLSSITKKRSSSPEVITLTQVGLETKQDTVTPIPVQVASTTDLVAEKIEAVKENDDD 548
KK S SS+P V E ++ T+ P + + A++++ E
Sbjct: 62 AKKKKQSAAASASSTP-VEEAQHAQEEQQEQTILQEPGFTQTIVEKDADQVDEPLEPIAS 120
Query: 549 SITEEMPEPRTSDDPKGST 605
S + EP T + P ST
Sbjct: 121 SALGTV-EPPTDNKPSAST 138
>SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 455
Score = 29.1 bits (62), Expect = 0.72
Identities = 20/97 (20%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +3
Query: 258 GVPPVNEDLKEATENLDEI-RDRKENER-AVSTEKHKHGITKKLSSITKKRSSSPEVITL 431
G P +D KE E LD++ D ++NE+ + ++ S+ ++ +S +
Sbjct: 40 GAPSEVQDEKELLEFLDQLENDEEKNEKNPIEEANEENESVAATSNERQQHDASNQPSQA 99
Query: 432 TQVGLETKQDTVTPIPVQVASTTDLVAEKIEAVKEND 542
Q + ++ TP V + + E +E K+++
Sbjct: 100 AQTTINKNTESATPKTVNEINKSQEFQEHVETPKQSN 136
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 29.1 bits (62), Expect = 0.72
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 5/113 (4%)
Frame = +3
Query: 270 VNEDLKEATENLDEIRDR-KENERAVSTEKHKHGITK----KLSSITKKRSSSPEVITLT 434
+N LK E L + + K+ VS EK + G T + S T SS + + T
Sbjct: 447 LNPALKNYMEELKLLEQQNKKRLLLVSQEKERKGYTSASPDRPLSQTITESSVAKTKSTT 506
Query: 435 QVGLETKQDTVTPIPVQVASTTDLVAEKIEAVKENDDDSITEEMPEPRTSDDP 593
+T + T PV+V++ E + + E++ + +P + D P
Sbjct: 507 PKSTDTPTEATTS-PVKVSTKNSNTTENLNGINESNMPMLQNGLPLRTSGDHP 558
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 28.7 bits (61), Expect = 0.95
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +3
Query: 288 EATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSSSPEVITL--TQVGLETKQD 461
E TE R K A S +K + +K ++ +KR S E + + KQ+
Sbjct: 501 EKTEPKKLARPAKIKNEAWSKQKE---VKEKRNTRREKRKSKKEFLKAQKNEASNNLKQE 557
Query: 462 TVTPIPVQVASTTDLVAEKIEAVKENDDD 548
V+ Q DL+ E+ +A+ E ++D
Sbjct: 558 IVSKAGAQETENDDLIDEESDALSELEED 586
>SPBC25B2.07c |mug164||microtubule-associated
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 28.7 bits (61), Expect = 0.95
Identities = 28/128 (21%), Positives = 57/128 (44%)
Frame = +3
Query: 225 TELHHKRSRAPGVPPVNEDLKEATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKR 404
T L + AP +P KEA+ + + I ++ +V+T KH ITK +S +
Sbjct: 113 TSLARLSNNAPRIP------KEASLHENSISSKESP--SVTTSKHVATITKPSTSSIARM 164
Query: 405 SSSPEVITLTQVGLETKQDTVTPIPVQVASTTDLVAEKIEAVKENDDDSITEEMPEPRTS 584
SS+ + + + K P ++ + ++ + K+ ++DD + + P ++
Sbjct: 165 SSNARIAAIPR----AKSSMAVRSPSRLGNGPNVRSPKVGFNAKSDDSPVVK---SPGSN 217
Query: 585 DDPKGSTK 608
D P S +
Sbjct: 218 DKPSASPR 225
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 28.7 bits (61), Expect = 0.95
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +3
Query: 405 SSSPEVITLTQVGLETKQDTVTPIPVQVASTTDLVAEKIEAVKENDDDSITEEMPEPR 578
SSS + T T ++ D++ +P Q+ ST + ++ K+ DD+ I EE E R
Sbjct: 622 SSSRDDKTNTSSTQPSQVDSL--VPTQLDSTIPTQIDSVQRNKDQDDEEILEERRESR 677
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 27.5 bits (58), Expect = 2.2
Identities = 28/131 (21%), Positives = 56/131 (42%), Gaps = 8/131 (6%)
Frame = +3
Query: 192 KTYRPELPESPTELHHKRSRAPGVPPVNEDLKEATENLDEIRDRKENE--RAVSTEKHKH 365
+TY L ESP E ++ N+DL TE L + N+ A +
Sbjct: 240 RTYHLYLDESPEESEPEKELKATFNQQNQDLYNQTEALKSTNEELINQIKSAEELDSAIQ 299
Query: 366 GITKKLSSITKKRSSSPEVITLTQVGLETKQDTVTPIPVQV---ASTTDLVAEKIEAVK- 533
+ ++ ++ + ++ + +E++ + + + V + S L+ EK +++K
Sbjct: 300 VLEERYRTMQRDEVKFQSAMSGMKSKMESRTNLMKQLQVNIEEKESQLQLLKEKRDSLKY 359
Query: 534 --ENDDDSITE 560
EN D SI+E
Sbjct: 360 QVENQDISISE 370
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.5 bits (58), Expect = 2.2
Identities = 21/105 (20%), Positives = 49/105 (46%)
Frame = +3
Query: 315 RDRKENERAVSTEKHKHGITKKLSSITKKRSSSPEVITLTQVGLETKQDTVTPIPVQVAS 494
+ +KE +RA S E K + K+ S K+ SSS ++ + + + + +S
Sbjct: 53 KSKKEAKRASSPEPSKKSVKKQKKSKKKEESSSE-----SESESSSSESESSSSESESSS 107
Query: 495 TTDLVAEKIEAVKENDDDSITEEMPEPRTSDDPKGSTKWFDDEEA 629
+ + + E++++ I + + +S + S++ ++EEA
Sbjct: 108 SESESSSSESSSSESEEEVIVKTEEKKESSSESSSSSESEEEEEA 152
>SPAC140.04 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 295
Score = 27.5 bits (58), Expect = 2.2
Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 3/113 (2%)
Frame = +3
Query: 294 TENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSSSPEVITL-TQVGLETK--QDT 464
T+ L E D + +R + ++ + + S+I KKR TL T+ E + Q +
Sbjct: 43 TDKLLEANDNETTKRKLLVKQKRKSNKEFQSNIIKKRKDEERKGTLKTEQANEEELLQRS 102
Query: 465 VTPIPVQVASTTDLVAEKIEAVKENDDDSITEEMPEPRTSDDPKGSTKWFDDE 623
+ + A ++E +KE +DD I + + P+ T DE
Sbjct: 103 RLELERKAKKYDQYAAGELE-IKETEDDGILVDFTRKWAEEAPENETVEITDE 154
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 27.1 bits (57), Expect = 2.9
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +3
Query: 381 LSSITKKRSSSPEVITLTQVGLETKQDTVTPIPVQVASTTDLVAEKIEAVKENDDDSITE 560
LSS++K S+S +T ++ K VQ A + A KE ++ TE
Sbjct: 213 LSSVSKVASTSSLPVTSVSASVDPKS---AASKVQDAEFSIQTAPSFP--KEKEEKENTE 267
Query: 561 EMPEPRTSDDPKGSTK 608
E E + S +P G++K
Sbjct: 268 ETEESKKSINPTGTSK 283
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 27.1 bits (57), Expect = 2.9
Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 7/121 (5%)
Frame = +3
Query: 285 KEATENLDEIR-DRKENERAVSTEKHKHGITKKLSSITKKRSSSPEVI--TLTQVGLETK 455
K A+ L I+ K N STE K+ + TKK + PE+ LTQ +E
Sbjct: 13 KVASSKLKNIKKSSKRNNSQSSTEPRKNATSLDSKKTTKKGVALPEIAERELTQEDIEFF 72
Query: 456 QDTVTPIPVQVASTTDLVAEKIEAVKENDDDSITE----EMPEPRTSDDPKGSTKWFDDE 623
+ + + + + + +K+E D + + E+ R S D + + D
Sbjct: 73 NENPSSLKYLSSINPEDLGKKVEKGPRPDIYDLKKSQQFELDTSRLSSDEESVLDYSKDS 132
Query: 624 E 626
E
Sbjct: 133 E 133
>SPAC23H3.05c |swd1||COMPASS complex subunit
Swd1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 2.9
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 158 LTGRCRRVSQTQDIST*IARVAHRITSQTIQSTWRTACQRRL 283
L+G + D ST R +HRITSQ+I+ + C+R L
Sbjct: 181 LSGTSKGWFHVIDASTTKIRSSHRITSQSIKQIRLSFCKRFL 222
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 26.6 bits (56), Expect = 3.8
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 276 EDLKEATENLDEIRDRKENERAVSTEKHKHGITKKLS-SITKKRSSSPEVITLTQVGL 446
E + A +E R+R+E E + E H K+ + SITK++ E++ ++ L
Sbjct: 958 ERMLAAQRAKEEERERREEEERENDEDHPSRTYKRTTKSITKRQQRREEMVREKEIRL 1015
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/85 (17%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +3
Query: 375 KKLSSITKKRSSSPEVITLTQVGLETKQDTVTPIPVQVASTTDLVAEKIEAVKENDDD-S 551
+++ S TKK S+SP ++ + + ++ + + EK+ ++++ +
Sbjct: 767 ERVKSNTKKESNSPRQVSKLKRPIGASNKILSGKFGEAFKKFEFGGEKMSRRRKSETKKN 826
Query: 552 ITEEMPEPRTSDDPKGSTKWFDDEE 626
+ +P+ + PK S +W + E
Sbjct: 827 LVSILPDTEVDEYPKASNEWIVESE 851
>SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone
regulator|Schizosaccharomyces pombe|chr 2|||Manual
Length = 195
Score = 26.6 bits (56), Expect = 3.8
Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 6/136 (4%)
Frame = +3
Query: 219 SPTELHHKRSRAPGVPPVNEDLKEATENLDEIRDRKENE-RAVSTEKHKHGITKKLSSIT 395
S +H+ R P +NE L E ++L E + E + + K LS +
Sbjct: 6 STVTIHYGNQRFPVAVNLNETLSELIDDLLETTEISEKKVKLFYAGKRLKDKKASLSKLG 65
Query: 396 KKRSSSPEVITLTQVGLETKQ-DTVTPIPVQVASTT--DLVAEKIEAVKENDDDSITEEM 566
K S I + +K+ DTV P P A ++ +I+A+ + D ++
Sbjct: 66 LKNHSKILCIRPHKQQRGSKEKDTVEPAPKAEAENPVFSRISGEIKAIDQYVDKELSPMY 125
Query: 567 PE--PRTSDDPKGSTK 608
+ S+DPK K
Sbjct: 126 DNYVNKPSNDPKQKNK 141
>SPBC119.01 |rpn3|SPBPJ4664.07|19S proteasome regulatory subunit
Rpn3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 497
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 447 ETKQDTVTPIPVQVASTTDL-VAEKIEAVKEND 542
ETKQ+TVT +P V + +A ++A K+ D
Sbjct: 23 ETKQNTVTEVPRTVLQDVEANIAALMQATKQRD 55
>SPAC29A4.20 |||RNA polymerase II elongator complex, histone
acetyltransferase subunit |Schizosaccharomyces pombe|chr
1|||Manual
Length = 544
Score = 26.2 bits (55), Expect = 5.0
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 192 KTYRPELPESPTEL-HHKRSRAPGVPPVNEDLKEATENLDEIRDRKENERAVSTEKHKHG 368
KTYRPE PT L VP + D K+ +E ER K++HG
Sbjct: 456 KTYRPEFTSQPTSLVRELHVYGSAVPVHSRDPKKFQHQGFGTLLLEEAERIA---KYEHG 512
Query: 369 ITKKLSSIT 395
+KK+S I+
Sbjct: 513 -SKKISVIS 520
>SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 794
Score = 26.2 bits (55), Expect = 5.0
Identities = 28/134 (20%), Positives = 51/134 (38%), Gaps = 13/134 (9%)
Frame = +3
Query: 261 VPPVNEDLKEATENLDEIRDRKENERAVSTEKHKHGITKKLSSITKKRSSSPEVITLTQ- 437
+ P+ + L+ + +D +RD+ N VS +T+ +S+ + ++ L +
Sbjct: 453 INPMLDGLRNSVATVDALRDK--NGTLVSKYIIPETVTEAISNYDSSTGRTWDICNLNKL 510
Query: 438 -------VGLETKQDTVTPIPVQVASTTD----LVAEKIEAVKENDDDSITEEMPEPRTS 584
V + +P+ Q +T I DD P+ S
Sbjct: 511 HPYSGKPVSYKLISRDTSPVLSQPGTTNSDCSGFAENNIYVTPYMDDQIFPTGDYAPQAS 570
Query: 585 DD-PKGSTKWFDDE 623
DD PKG +KW D+
Sbjct: 571 DDTPKGLSKWISDD 584
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 25.8 bits (54), Expect = 6.7
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 11/71 (15%)
Frame = +3
Query: 240 KRSRA-PGVP--PVNE---DLKEA-----TENLDEIRDRKENERAVSTEKHKHGITKKLS 386
+R RA P VP PV E DL EA +E+ + I D KEN S ++K+
Sbjct: 1435 RRKRALPVVPSKPVVEVFNDLNEAFDDENSEDENGINDTKENRATESNFSGVDSMSKERE 1494
Query: 387 SITKKRSSSPE 419
+++ +SPE
Sbjct: 1495 NVSSNEDNSPE 1505
>SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 615
Score = 25.8 bits (54), Expect = 6.7
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = +3
Query: 384 SSITKKRSSSPEVITLTQVGLETKQDTVTPIPVQVASTTDLVAEKIEAVKENDDDSITEE 563
SS +KK+ + P + + +Q + + P S D KI VK+N + S E
Sbjct: 346 SSRSKKKHTGPSLSSASQPSAASSSSSSEP------SNLD----KINDVKKNIEVSANEP 395
Query: 564 MPEPRTSDDPK 596
P P D PK
Sbjct: 396 QPRPVKEDVPK 406
>SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 796
Score = 25.8 bits (54), Expect = 6.7
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -3
Query: 228 LWATLAIQVDMSCVWLTLRQRPVSRQTLRCFLSRTLFKPQASISVDKYKKHTVV-SMCKF 52
LW+T+ +++ CV + L + +LS +F + Y T++ S +F
Sbjct: 688 LWSTIFLRMIFGCVIMQLTMMGLMSLRKAYWLSTVIFPLLCFTVISAYNFSTMIRSSMQF 747
Query: 51 VFFFY*R 31
V +Y R
Sbjct: 748 VSLYYIR 754
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 198 YRPELPESPTELHHKRSRAPGVPPVN 275
Y P P+SP + S +P +PP N
Sbjct: 957 YTPVAPQSPVAAASRISSSPNMPPSN 982
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 359 VFLCGHRPLIFFSVPDFIKIFGSFFQVFVDRRYARCSGS 243
+F GHR L+FF + + I + + RY R GS
Sbjct: 748 LFRSGHRILMFFQMTQIMNIMEDYLH-YRQWRYLRLDGS 785
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 25.4 bits (53), Expect = 8.8
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -1
Query: 359 VFLCGHRPLIFFSVPDFIKIFGSFFQVFVDRRYARCSGS 243
+FL GH+ L+FF + + I + + + +Y R GS
Sbjct: 1199 LFLTGHKTLMFFQMTQIMTIMEDYLR-SKNWKYLRLDGS 1236
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 25.4 bits (53), Expect = 8.8
Identities = 23/103 (22%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Frame = +3
Query: 270 VNEDLKEATENLDEIRDRKENERAVST-EKHKHGITKKLSSITKKRSSSPEVITLTQVGL 446
+ E +K+ + +++ + E +S EK K +++ ++ + + E++ + L
Sbjct: 219 LEESIKQVSSSIELEKINAEQRLQISELEKLKAAQEERIEKLSSN-NRNVEILKEEKNDL 277
Query: 447 ETKQDTVTPIPVQVASTTDLVAEKIEAVKENDDDSITEEMPEP 575
E+K +VA T +L EKI+ + IT E+P P
Sbjct: 278 ESKLYRFEEYRDKVA-TLELENEKIQTELNSWKSLITNELPTP 319
>SPAC644.18c |bet3||TRAPP complex subunit Bet3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 183
Score = 25.4 bits (53), Expect = 8.8
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -3
Query: 261 RQVLW---IVCDVILWATLAIQVDMSCVWLTLRQRPVSRQTLRCFLSRTL 121
RQ LW I+C VI A +Q+D+ V+L R +R L R L
Sbjct: 125 RQKLWYSNILCGVIRGALEMLQMDVDAVFLRDILRGDEHTEIRVHLKRIL 174
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.4 bits (53), Expect = 8.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 218 VAHRITSQTIQSTWRTACQRRLERSYRKS 304
VAH I ++T Q RT C+ ++ S +S
Sbjct: 1293 VAHSIDAKTFQGVVRTFCKSEVKESMLRS 1321
>SPAC1783.03 |fta2|sma2|Sim4 and Mal2 associated
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 351
Score = 25.4 bits (53), Expect = 8.8
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -1
Query: 545 IVILFNSFDFFGHEIGRRCHLYWY 474
IV L +F F H RC+ ++Y
Sbjct: 229 IVALLRAFSLFAHHYSYRCNTWFY 252
>SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 607
Score = 25.4 bits (53), Expect = 8.8
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 501 DLVAEKIEAVKENDDDSIT-EEMPEPRTSDDPKGSTKWFDDEE 626
+L AE+ + V E DD+I+ E +P + +D+P+ + D EE
Sbjct: 465 ELSAEENDDVSEALDDNISGEAVPISKKNDEPENVEQIDDAEE 507
>SPBC21C3.10c |||5-amino-6-|Schizosaccharomyces pombe|chr 2|||Manual
Length = 268
Score = 25.4 bits (53), Expect = 8.8
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +3
Query: 360 KHGITKKLSSITKKRSSSPEVITLTQVGLETKQDTVTPIPVQVASTTDLVAEKIEAVKEN 539
KH + SI + E +L Q+ L +K+ V ++ +V + EN
Sbjct: 15 KHVLLTWAQSINGRIGYVVESPSLGQLRLSSKESFVMTHLLRTKFDGIMVGSR---TAEN 71
Query: 540 DDDSITEEMPEPRTSD 587
D+ S+T ++P+P D
Sbjct: 72 DNPSLTAKLPDPANPD 87
>SPAC11H11.04 |mam2||pheromone p-factor receptor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 348
Score = 25.4 bits (53), Expect = 8.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 24 ICAFNKKKIRIYTLIQRCVFYIYQHLWM 107
ICA ++K RI T+I C+ + W+
Sbjct: 152 ICAHDRKTQRIMTVISACLTVLVLAFWI 179
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,009,715
Number of Sequences: 5004
Number of extensions: 62302
Number of successful extensions: 281
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 281
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 361294920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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