Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5c04
(386 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1107 - 24024387-24024497,24025799-24026410 36 0.015
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 36 0.015
05_03_0053 + 7850656-7850996,7851704-7851936,7852676-7852775,785... 34 0.034
09_01_0165 - 2436769-2437442,2438159-2438224,2438318-2438415,243... 31 0.32
12_02_1162 + 26612571-26613986,26614095-26614142 30 0.56
09_04_0041 - 14051870-14052430,14052509-14052562 30 0.56
11_04_0419 - 17453913-17454041,17454373-17454431,17457498-174577... 30 0.74
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 0.97
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 29 1.3
01_06_0182 - 27264990-27265049,27265531-27265648,27265733-272658... 29 1.3
12_02_0881 - 23970143-23970433,23970814-23971116,23971490-239720... 29 1.7
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859... 28 2.2
07_03_1207 - 24881074-24881906,24882204-24882285,24882921-24882926 28 2.2
03_01_0051 + 445035-445303,445380-445590,445737-445930,446151-44... 28 2.2
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043... 28 3.0
05_03_0475 + 14486969-14487140,14487215-14487338,14487424-144875... 28 3.0
03_01_0095 + 759530-760123 28 3.0
02_03_0231 - 16636377-16636403,16636590-16636645,16636793-166368... 28 3.0
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 27 3.9
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 27 3.9
04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859 27 3.9
04_04_0293 - 24189344-24189350,24189804-24190026,24190411-241905... 27 3.9
04_04_0201 - 23555336-23556008,23556097-23556258,23556353-235572... 27 3.9
12_02_0588 - 20842209-20842337,20842464-20842560,20842620-208427... 27 5.2
10_06_0029 + 9822216-9823124,9825210-9825329,9826188-9826304,982... 27 5.2
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 27 5.2
05_06_0183 - 26182481-26182897,26183005-26183163,26183261-261837... 27 5.2
04_04_1080 - 30674122-30674204,30674842-30674913,30675261-306753... 27 5.2
04_03_0827 - 20108937-20109046,20109146-20109234,20109400-201095... 27 5.2
03_06_0316 + 33091194-33091370,33091451-33092155 27 5.2
02_01_0615 - 4604373-4604537,4604618-4604707,4604871-4604989,460... 27 5.2
01_06_1209 + 35427160-35427318,35427436-35427501,35427737-354278... 27 5.2
01_06_1075 + 34350155-34350709 27 5.2
06_02_0282 + 13720419-13720985 27 6.9
04_04_0528 + 25986862-25987938,25988025-25988965,25989071-25989140 27 6.9
03_04_0055 + 16891212-16891848,16893166-16893206 27 6.9
01_01_0965 - 7589659-7589785,7590188-7590317,7590339-7590438,759... 27 6.9
08_02_1354 - 26337628-26338540,26339638-26339981 26 9.1
07_03_1452 - 26629219-26629428,26630113-26630280,26630363-266304... 26 9.1
06_03_1310 + 29238644-29240260 26 9.1
04_04_1382 - 33141860-33142153 26 9.1
04_01_0034 - 401208-402923 26 9.1
01_05_0641 - 23881429-23881836 26 9.1
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 35.5 bits (78), Expect = 0.015
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +1
Query: 4 PSRAATRAPG--PGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAPNAYALKLGSGS 177
P+ AT AP P + AP + PP K +APA + A P + P A S
Sbjct: 66 PTTPATPAPAEAPTTPAPTKAPPTKSTKAPAPAPKAAKATPPPASSPPVEAPV--ASPPS 123
Query: 178 PAYTMGARVGFQAKAKSPGPA 240
PA A + + A +P PA
Sbjct: 124 PAAEAPATIPTKPDAPAPAPA 144
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 35.5 bits (78), Expect = 0.015
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +1
Query: 7 SRAATRAPGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAPNAYALKL-GSGSPA 183
S ++++P PGS P PP P AP + G AP P+ +A G GSP
Sbjct: 1143 SPPSSQSPPPGSSPPPASPPPSTPSAPPTNSS---GSAPSPPSPSQSAPPANTGGGGSPP 1199
Query: 184 YTMGARVGFQAKAKSPGP 237
+ G+ +A P P
Sbjct: 1200 PSHGSPPAPKAVQSQPAP 1217
>05_03_0053 +
7850656-7850996,7851704-7851936,7852676-7852775,
7852888-7852949,7853603-7853640
Length = 257
Score = 34.3 bits (75), Expect = 0.034
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 34 PGSHAPERCPPMKDPRAPAYSMGARLGFAPR-RAGPAPNAYALKLGSGSPA 183
PGSH+P+R PP + GA+ GF+ R PA A A G G A
Sbjct: 38 PGSHSPDRSPPAATLDLLPAAKGAKRGFSDEARPLPASAAAAAAAGKGKKA 88
>09_01_0165 -
2436769-2437442,2438159-2438224,2438318-2438415,
2439856-2440214
Length = 398
Score = 31.1 bits (67), Expect = 0.32
Identities = 27/93 (29%), Positives = 35/93 (37%), Gaps = 5/93 (5%)
Frame = +1
Query: 28 PGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAPNAYALKLGSGSPAYTMGARVG 207
PG G P PPM P +P + GA + P P P A G P Y G G
Sbjct: 247 PGQGPVLPRDAPPMPPPPSPP-NPGAPPSYQPH--APNPQAGYTNYQGGVPGY-QGRAPG 302
Query: 208 FQA-----KAKSPGPAVYFQRDANVYRTKPPMY 291
+Q + P P +Q + Y+ P Y
Sbjct: 303 YQGGNQEYRGPPPPPPSAYQGNNPGYQGGGPGY 335
>12_02_1162 + 26612571-26613986,26614095-26614142
Length = 487
Score = 30.3 bits (65), Expect = 0.56
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 7 SRAATRAPGPGSHAPERCPPMKDPRAPAYSMG 102
SR R PGP +H E +DP A YS G
Sbjct: 30 SREYIRGPGPETHTTESAQDGQDPPAGVYSYG 61
>09_04_0041 - 14051870-14052430,14052509-14052562
Length = 204
Score = 30.3 bits (65), Expect = 0.56
Identities = 21/59 (35%), Positives = 22/59 (37%)
Frame = +1
Query: 4 PSRAATRAPGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAPNAYALKLGSGSP 180
P R R P P A P P APA S G P+ P A A K SG P
Sbjct: 88 PKRGRGRPPKPKDAAAAAAAPAPAPAAPAASSPRPRGRPPKPKDPLAEAVA-KATSGMP 145
>11_04_0419 -
17453913-17454041,17454373-17454431,17457498-17457738,
17458206-17458316
Length = 179
Score = 29.9 bits (64), Expect = 0.74
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 127 RAGPAPNAYALKLGSGSPAYTMGARVGFQAKA 222
RAG PN + LK SG+P +T ++V Q+ A
Sbjct: 115 RAGRGPNNFNLKNKSGNPTFTPTSKVQVQSPA 146
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.5 bits (63), Expect = 0.97
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +1
Query: 4 PSRAATRAPGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPA-PNAY 153
P T P P S +P PP+ P APA F A P+ P+AY
Sbjct: 93 PPLLPTPPPPPASISPTPAPPLPPPPAPAPPPTPTPKFPSSSANPSPPDAY 143
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 29.1 bits (62), Expect = 1.3
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +1
Query: 22 RAPGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAPNAYALKLGSGS 177
RAP P S P PP P P M R A +A PAP + G+GS
Sbjct: 255 RAPPPQSVRP---PPPPPPPPPPPPMPPRTDNASTQAAPAPPPPLPRAGNGS 303
>01_06_0182 -
27264990-27265049,27265531-27265648,27265733-27265811,
27266816-27267116
Length = 185
Score = 29.1 bits (62), Expect = 1.3
Identities = 25/76 (32%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
Frame = +1
Query: 76 PRAPAYSMGARLGFAPRRAGPAPNAYALKLGS-GSPAYTMGA----RVGFQAKAKSPGPA 240
P A A GF P A P P A + G+ G+P+ G VGF A PG
Sbjct: 6 PDADGKPRSASSGFQPS-APPQPQAQQYQYGTFGAPSSAPGEVPQPAVGFPQPAPPPGLR 64
Query: 241 VYFQRDANVYRTKPPM 288
Y Q Y PP+
Sbjct: 65 HYPQPPPPSYAVYPPL 80
>12_02_0881 -
23970143-23970433,23970814-23971116,23971490-23972077,
23972606-23972761,23972852-23972910,23974294-23974561
Length = 554
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 118 APRRAGPAPNAYALKLGSGSPAYT 189
A AG +P +A KL +GSP YT
Sbjct: 322 ARNSAGDSPRVFAAKLQAGSPTYT 345
>11_06_0561 -
24984960-24985205,24985283-24985354,24985906-24985977,
24986612-24986782,24987464-24987653,24987733-24987976,
24988162-24988474,24988687-24989517,24989628-24989672,
24989677-24989790,24989877-24990371,24990627-24990824,
24990902-24991357
Length = 1148
Score = 28.3 bits (60), Expect = 2.2
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +1
Query: 4 PSRAATRAPGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAPNA 150
P AAT AP G+ PRAPA + G +PRR PA +A
Sbjct: 87 PGGAAT-APRQGAPPAAATSVQGAPRAPATAATVPQGGSPRRTVPAQSA 134
>07_03_1207 - 24881074-24881906,24882204-24882285,24882921-24882926
Length = 306
Score = 28.3 bits (60), Expect = 2.2
Identities = 26/76 (34%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +1
Query: 61 PPMKDPRAPAYSMGARLGFAPRRAGPAPNAYALKLGSGSP-AYTMGARVGFQAKAKSPGP 237
PP +P AP M A G A PAP A +L S +P AY + G G
Sbjct: 199 PPRGEPIAPPMMMPAAQGVAVPSIWPAP-AGSLSCYSYNPAAYDQSSYYGGGGYGYGGGA 257
Query: 238 AVYFQRDANVYRTKPP 285
FQ A Y PP
Sbjct: 258 ---FQAPAGYYGVAPP 270
>03_01_0051 +
445035-445303,445380-445590,445737-445930,446151-446228,
447049-447141,448495-448525,448729-449058
Length = 401
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 22 RAPGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAPNAYALKL 165
R P PG P CPP PR P +L F P + A +L+L
Sbjct: 330 RTPTPGIREPATCPPA--PRKPRPVACRKLLFDPAQQQGKGKAISLRL 375
>09_06_0147 + 21195222-21195377,21195471-21195522,21196842-21204362,
21204453-21205031,21205176-21205484,21205638-21205718,
21205971-21206279,21207430-21207816,21207964-21208767,
21208856-21209218,21209437-21209667,21209934-21210278,
21210494-21210712,21210759-21210815,21210978-21211322,
21211538-21211756,21211803-21211859,21212022-21212366,
21212584-21212814,21213100-21213458
Length = 4322
Score = 27.9 bits (59), Expect = 3.0
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +1
Query: 40 SHAPERCPPMKDPR-APAYSMGARLGFAPRRAGPAPNAYALKLGSGSP 180
S E P PR + Y G AP+ P P A +LGSGSP
Sbjct: 3954 SAVQESTPSSAGPRESTPYPSVEDQGSAPKAEEPLPPTTANQLGSGSP 4001
Score = 27.1 bits (57), Expect = 5.2
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +1
Query: 40 SHAPERCPPMKDPRA-PAYSMGARLGFAPRRAGPAPNAYALKLGSGSP 180
S E P PR Y G AP+ P P A +LGSGSP
Sbjct: 3747 SAVQESTPSSAGPREFTPYPSVEDQGSAPKAEEPLPPTTANQLGSGSP 3794
>05_03_0475 +
14486969-14487140,14487215-14487338,14487424-14487559,
14487663-14488997
Length = 588
Score = 27.9 bits (59), Expect = 3.0
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = +1
Query: 4 PSRAATRAPGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAPNAYALKLGSGS 177
P A T +P S AP C R A S+ AR G PR A P+P A + + +G+
Sbjct: 278 PGAAGTSSPR--STAPA-CQQPAATRRGANSV-ARSGSTPRAASPSPRARDVSIAAGA 331
>03_01_0095 + 759530-760123
Length = 197
Score = 27.9 bits (59), Expect = 3.0
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 4 PSRAATRAPGPGSHAPERCPPMKDPRAPAYSMGA 105
P RAA APG G+ AP R P++ P P A
Sbjct: 102 PVRAAA-APGGGAAAPRRSAPVRVPMWPGKGAAA 134
>02_03_0231 -
16636377-16636403,16636590-16636645,16636793-16636853,
16637590-16637649,16638007-16638096,16638775-16638906,
16639016-16639293,16639916-16639949,16640036-16640105,
16641170-16641282,16641654-16641836,16642106-16642283,
16642958-16643142,16643347-16643477,16643620-16643772,
16643849-16643995,16644662-16644737
Length = 657
Score = 27.9 bits (59), Expect = 3.0
Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 4/91 (4%)
Frame = +1
Query: 31 GPGSHAP---ERCPPMKDPRAPAYSMGARLG-FAPRRAGPAPNAYALKLGSGSPAYTMGA 198
GPGS ER AP S + +G + ++ PNA KL + ++T
Sbjct: 472 GPGSSTSSTSERIAASSVACAPGLSPSSSMGSLSSEKSSLNPNAKEFKLNPNAKSFTPST 531
Query: 199 RVGFQAKAKSPGPAVYFQRDANVYRTKPPMY 291
V S GP Y+ + PPM+
Sbjct: 532 SVRPPQPPASDGP-YYYANNMPTAPLGPPMF 561
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 27.5 bits (58), Expect = 3.9
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Frame = +1
Query: 4 PSRAATRAPGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRA-----GPAPNAYALKLG 168
P R+P P S +P R P+K + R +PRR+ G +P +K
Sbjct: 242 PPARRERSPAPRSRSPRRRSPVKTTSSHRERSPVRRNGSPRRSPVRSIGRSPQRDRVKEQ 301
Query: 169 SGSPAYTMGARVGFQAKAKSPGPA 240
SP Q++++SP PA
Sbjct: 302 VRSPKQA-------QSRSRSPSPA 318
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 27.5 bits (58), Expect = 3.9
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Frame = +1
Query: 4 PSRAATRAPGPGSHAPERCP--PMKDPRAPAYSMGARLGFAPRRAGPAPNAYALKLGSGS 177
PS + T +P +P P P P + AYS + ++P G +P + + S
Sbjct: 1750 PSYSPT-SPSYSPTSPSYSPTSPSYSPTSSAYSPTSP-AYSPTSPGYSPTSPSYS--PSS 1805
Query: 178 PAYTMGARVGFQAKAKSPGPAVYFQRDANVYRTKPPMYS 294
P+Y + + A SP Y+ + Y P YS
Sbjct: 1806 PSYNPSSVKYTPSHAYSPSSPNYYSSTSPTYSPTSPSYS 1844
>04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859
Length = 429
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 4 PSRAATRAPGPGSHAPERCPPMKDPRAPAYSMGAR 108
PS AA AP PG C K P+ A GA+
Sbjct: 329 PSGAAASAPAPGDRRCSHCGVQKTPQWRAGPEGAK 363
>04_04_0293 -
24189344-24189350,24189804-24190026,24190411-24190529,
24191331-24191578
Length = 198
Score = 27.5 bits (58), Expect = 3.9
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Frame = +1
Query: 4 PSRAATRAPGPGSHAPERCPPMKDPRAP------AYSMGARLGFAPRRAGPAPNAYALKL 165
P+ AT GP AP P AP A + A AP A P+P A +
Sbjct: 18 PAPKATAPAGPARKAPAAAGPAPKATAPAGPAPKATATAAPSSKAPSPAAPSPEAPSPVA 77
Query: 166 GSGSPAYTMGARV 204
+ P+Y+ R+
Sbjct: 78 PAARPSYSSVLRL 90
>04_04_0201 -
23555336-23556008,23556097-23556258,23556353-23557206,
23557452-23557613,23558197-23558649,23559729-23559788,
23559983-23560058,23561546-23561593,23561948-23562022,
23562067-23562494
Length = 996
Score = 27.5 bits (58), Expect = 3.9
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +1
Query: 13 AATRAPGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRA 132
AA P G H P PP +DP AP + LG AP A
Sbjct: 864 AAPFPPHFGLHLPP--PPPRDPLAPMSNFPYSLGHAPSPA 901
>12_02_0588 -
20842209-20842337,20842464-20842560,20842620-20842733,
20843140-20843749,20844739-20845462,20845542-20845620,
20845783-20845865,20846148-20846226,20846332-20846420,
20846499-20846591,20847288-20847337,20847417-20847600,
20849227-20849542,20849626-20849657
Length = 892
Score = 27.1 bits (57), Expect = 5.2
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -3
Query: 120 CEAESSAHGVGRSAGVLHRGAALGSVRARPW 28
CE A G GR G+ AAL A PW
Sbjct: 17 CELGFGAAGRGRGGGLAEAAAALEGFLADPW 47
>10_06_0029 +
9822216-9823124,9825210-9825329,9826188-9826304,
9826387-9826476,9826706-9826756
Length = 428
Score = 27.1 bits (57), Expect = 5.2
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +1
Query: 13 AATRAPGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAPNAYALKLGSGSPAYTM 192
AAT A P H P R PP+ A A + A PRR +P+A + S S + ++
Sbjct: 2 AATLAQEPRHH-PSR-PPLAPAAAHAPNSAAAACSTPRRGKTSPHASSRHASSSSSSSSL 59
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 27.1 bits (57), Expect = 5.2
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 4 PSRAATRAPGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRA-GP 138
P + + AP P APE P + AP+ G+R PRR+ GP
Sbjct: 43 PIKPVSYAPKP-QPAPEEAPAAAEEAAPSDDPGSRPPPPPRRSQGP 87
>05_06_0183 -
26182481-26182897,26183005-26183163,26183261-26183714,
26184370-26184485
Length = 381
Score = 27.1 bits (57), Expect = 5.2
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 31 GPGSHAPERCPPMKDPRAPAYSMGARLG 114
G GS P R PP DP A A S + G
Sbjct: 12 GGGSLLPSRLPPAPDPAAMAVSAASARG 39
>04_04_1080 -
30674122-30674204,30674842-30674913,30675261-30675324,
30676358-30676394,30676562-30676675,30676791-30677002,
30677180-30677335,30677556-30678443
Length = 541
Score = 27.1 bits (57), Expect = 5.2
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +1
Query: 76 PRAPAYSMGARLGFAPRRAGPAPNAYALKLGSGSPAYTMGARVGFQAKAKSPGP 237
P + A S A G A +GP PNA SGS + ++ G S GP
Sbjct: 64 PLSNAPSRNASFGGAASNSGPVPNAGDRSNYSGSLSSSVPGASGSARAKSSSGP 117
>04_03_0827 -
20108937-20109046,20109146-20109234,20109400-20109548,
20109801-20109942,20110530-20110645,20111141-20111458
Length = 307
Score = 27.1 bits (57), Expect = 5.2
Identities = 16/67 (23%), Positives = 26/67 (38%)
Frame = +1
Query: 73 DPRAPAYSMGARLGFAPRRAGPAPNAYALKLGSGSPAYTMGARVGFQAKAKSPGPAVYFQ 252
D A A+ GA P P A A+ G + G + Q ++ P +Y+
Sbjct: 149 DSMAAAFGSGALFSIVSGMGSPNPVANAITTGVAFAVFQGGFFMIGQKFSQPPSEDIYYS 208
Query: 253 RDANVYR 273
R N+ +
Sbjct: 209 RGRNMLK 215
>03_06_0316 + 33091194-33091370,33091451-33092155
Length = 293
Score = 27.1 bits (57), Expect = 5.2
Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
Frame = +1
Query: 4 PSRAATRAPGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAPNAYALKLGSGSPA 183
P+ AA P P + A + +APA S A A + P A A PA
Sbjct: 136 PAAAAKPKPKPKAAAKPKAAAKPKAKAPAKSKAAAKPKAAAKPAAKPKAAAKPKSPAKPA 195
Query: 184 YTMGARVGFQAK--AKSPGPAVYFQRDANVYRTK 279
A +AK AK A + A V +TK
Sbjct: 196 AKPKAAPKAKAKPAAKPKAKAAPKPKAAAVTKTK 229
>02_01_0615 -
4604373-4604537,4604618-4604707,4604871-4604989,
4605132-4605234,4605318-4605414,4605512-4605575,
4605673-4605805,4605899-4606143,4606263-4606439,
4607110-4607419
Length = 500
Score = 27.1 bits (57), Expect = 5.2
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 4 PSRAATRAPGPGSHAPERCPPMKDPRAPAYSMG 102
P+ AA+ +PGPG +P P P APA + G
Sbjct: 40 PAAAASPSPGPGP-SPAPATPRVVPPAPAPATG 71
>01_06_1209 +
35427160-35427318,35427436-35427501,35427737-35427877,
35428342-35428434,35428530-35428646,35428890-35429054
Length = 246
Score = 27.1 bits (57), Expect = 5.2
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -3
Query: 120 CEAESSAHGVGRSAGVLHRGAALGSV 43
C AE S VGRS +LHRG L S+
Sbjct: 203 CNAEGSTK-VGRSTCLLHRGVVLTSL 227
>01_06_1075 + 34350155-34350709
Length = 184
Score = 27.1 bits (57), Expect = 5.2
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 86 GARGSFIGGQRSGACEPGPGARVAARD 6
G G + GA EPGPGA A+ D
Sbjct: 88 GGGGGELAAASDGAGEPGPGAAAASPD 114
>06_02_0282 + 13720419-13720985
Length = 188
Score = 26.6 bits (56), Expect = 6.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 31 GPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAG 135
G G HAP PP ++PR P + A RR G
Sbjct: 50 GGGGHAP--LPPPQNPRRPNLVGAEEVAVAARRRG 82
>04_04_0528 + 25986862-25987938,25988025-25988965,25989071-25989140
Length = 695
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 34 PGSHAPERCPPMKDPRAPAYS 96
P H P PP K PR P Y+
Sbjct: 386 PNLHLPSFSPPRKKPRNPPYA 406
>03_04_0055 + 16891212-16891848,16893166-16893206
Length = 225
Score = 26.6 bits (56), Expect = 6.9
Identities = 19/59 (32%), Positives = 24/59 (40%)
Frame = +1
Query: 10 RAATRAPGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAPNAYALKLGSGSPAY 186
RAA G G+ A PP + A A G G+A AGP + + G P Y
Sbjct: 118 RAAASTTGAGTSAASTTPPQQQHTANA--AGGYAGYAAPGAGPG----GMMMMMGQPMY 170
>01_01_0965 -
7589659-7589785,7590188-7590317,7590339-7590438,
7590524-7590643,7590910-7591145,7591585-7591714
Length = 280
Score = 26.6 bits (56), Expect = 6.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 21 SRPRAGLARSRALPPDEGPPRSC 89
S P G R R PP PPR C
Sbjct: 18 SLPAGGRLRLRLAPPPRAPPRLC 40
>08_02_1354 - 26337628-26338540,26339638-26339981
Length = 418
Score = 26.2 bits (55), Expect = 9.1
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 37 GSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAPNAYALKLGSGSPAYTMG 195
G + E C K P AP Y ++ PRR P+P+ + SP+ T+G
Sbjct: 133 GKNIKEGCAINKQPFAPFYKAVLKITGTPRR-NPSPSP---SPATRSPSTTLG 181
>07_03_1452 -
26629219-26629428,26630113-26630280,26630363-26630425,
26630499-26630606,26630820-26630932,26631026-26631322,
26631424-26631502,26631733-26631841,26631927-26631968,
26632467-26632597,26633482-26633623,26633713-26633828,
26634121-26634657
Length = 704
Score = 26.2 bits (55), Expect = 9.1
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -1
Query: 116 KPSRAPME*AGARGSFIGGQRSGACEPGPGARVAA 12
KPS+ P A + G +GA PGP A AA
Sbjct: 7 KPSQIPEPEAEEAAAAAGVAVAGAASPGPAAAAAA 41
>06_03_1310 + 29238644-29240260
Length = 538
Score = 26.2 bits (55), Expect = 9.1
Identities = 16/59 (27%), Positives = 21/59 (35%)
Frame = +1
Query: 4 PSRAATRAPGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAPNAYALKLGSGSP 180
P R P P S P P P P YS + P + P+ + + S SP
Sbjct: 391 PRRTPPTPPPPSSPTPSHLP----PPPPTYSESPKSSMPPSTSPPSSHGASPPSSSSSP 445
>04_04_1382 - 33141860-33142153
Length = 97
Score = 26.2 bits (55), Expect = 9.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 97 WSRQERGGPSSGGSARERASPAL 29
WSR RGG GG A E AL
Sbjct: 70 WSRSIRGGDGGGGEADELLRQAL 92
>04_01_0034 - 401208-402923
Length = 571
Score = 26.2 bits (55), Expect = 9.1
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +1
Query: 34 PGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAP 144
P + PPM+ P A RL PR A P P
Sbjct: 274 PAAKQAAAAPPMRAPLAEQQPHAPRLPLQPRPAPPPP 310
>01_05_0641 - 23881429-23881836
Length = 135
Score = 26.2 bits (55), Expect = 9.1
Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 52 ERCPPMKDPRAPAY-SMGARLGFAPRRAGPAPNA 150
ERC P+ P A Y S G RL PRRA P A
Sbjct: 67 ERCEPLSFPGAIHYDSRGRRLS-QPRRAKAKPAA 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.133 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,045,471
Number of Sequences: 37544
Number of extensions: 211433
Number of successful extensions: 1120
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 648814968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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