Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5c01
(616 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0115 - 19888252-19888406,19888507-19888573,19888867-198891... 100 2e-21
04_03_0888 - 20559435-20559565,20559674-20559740,20560217-205604... 97 1e-20
12_01_0377 - 2939384-2939505,2939629-2939695,2940324-2940543,294... 94 9e-20
04_01_0069 - 697811-697876,697956-698166,698265-698359,698448-69... 89 2e-18
06_01_0978 + 7595641-7595843,7595952-7596072,7596176-7596253,759... 64 8e-11
02_05_0690 - 30943184-30943305,30944048-30944459,30944549-309446... 41 7e-04
10_08_0158 - 15298902-15299111,15300557-15300655,15301375-153014... 36 0.019
03_01_0367 + 2852287-2852603,2853202-2853278,2853388-2853431,285... 33 0.24
01_06_0255 - 27918447-27918534,27918615-27918685,27919131-279192... 30 1.3
10_02_0105 - 5345149-5347833 28 6.8
08_01_0601 - 5268520-5271112,5272448-5272950 28 6.8
05_07_0348 - 29444042-29444140,29444256-29444410,29445281-294453... 28 6.8
02_05_0886 + 32507324-32507938,32508103-32508252,32508498-325089... 27 8.9
02_01_0447 - 3220489-3220560,3221287-3221420,3221500-3221731,322... 27 8.9
>02_04_0115 -
19888252-19888406,19888507-19888573,19888867-19889101,
19889179-19889255,19889350-19889415,19889517-19889565,
19889651-19889701,19889799-19889851,19889973-19890024,
19890126-19890214,19890308-19890393,19890603-19890659,
19890742-19890919,19891852-19891908,19892209-19892439
Length = 500
Score = 99.5 bits (237), Expect = 2e-21
Identities = 55/106 (51%), Positives = 69/106 (65%)
Frame = +1
Query: 109 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKRSK 288
RY+ SLGLLT KF++LL++A DG+LDL A L V QKRRIYDITNVLEGIGLIEK K
Sbjct: 169 RYDSSLGLLTKKFINLLKQAPDGILDLNNAAETLEV-QKRRIYDITNVLEGIGLIEKTLK 227
Query: 289 NSIQWRGAGPDYDKNEIGKKVMGLRKQLSYLDEHERLLDRRTRQPR 426
N I+W+G D E+ + L+ ++ L E+ LD R R
Sbjct: 228 NRIRWKGL--DDSGVELDNGLSALQAEVENLSLKEQALDERISDMR 271
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/53 (28%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +2
Query: 407 DEPDNQDMCFVMDTEIQ--QCFQNDLVLVLEAPLGANLSIGTQPNKDRESNFL 559
++ +NQ +V + +I+ CFQN+ ++ ++AP G L + P+ D ++L
Sbjct: 279 EDENNQRWLYVTEDDIKGLPCFQNETLIAIKAPHGTTLEV---PDPDEAGDYL 328
>04_03_0888 -
20559435-20559565,20559674-20559740,20560217-20560477,
20560783-20560848,20560971-20561019,20561441-20561491,
20561568-20561620,20561743-20561794,20561867-20561955,
20562044-20562135,20562298-20562351,20563411-20563462,
20563775-20563963
Length = 401
Score = 96.7 bits (230), Expect = 1e-20
Identities = 52/107 (48%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Frame = +1
Query: 109 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVR-QKRRIYDITNVLEGIGLIEKRS 285
RY+ SLGLLT KF++LL++ +DG+LDL A +L V +KRRIYDITNVLEG GLIEK+
Sbjct: 93 RYDNSLGLLTRKFINLLKQTQDGILDLNDAAKILDVWVRKRRIYDITNVLEGTGLIEKKL 152
Query: 286 KNSIQWRGAGPDYDKNEIGKKVMGLRKQLSYLDEHERLLDRRTRQPR 426
KN I+WRG+ D + + L+ ++ L E+ LDR + R
Sbjct: 153 KNRIRWRGS--DDSGTNLDSDISCLKTEVENLYIQEQALDRSISEIR 197
>12_01_0377 -
2939384-2939505,2939629-2939695,2940324-2940543,
2940655-2940731,2940813-2940878,2940970-2941018,
2941131-2941181,2941262-2941314,2941432-2941486,
2941563-2941651,2941742-2941827,2941933-2941989,
2942086-2942275,2943847-2944005
Length = 446
Score = 93.9 bits (223), Expect = 9e-20
Identities = 51/106 (48%), Positives = 69/106 (65%)
Frame = +1
Query: 109 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKRSK 288
RY+ SLGLLT KF++LL+ A G++DL A L V QKRRIYDITNVLEGIGLIEK+ K
Sbjct: 130 RYDSSLGLLTKKFLNLLKGAPGGIVDLNNAAETLEV-QKRRIYDITNVLEGIGLIEKKLK 188
Query: 289 NSIQWRGAGPDYDKNEIGKKVMGLRKQLSYLDEHERLLDRRTRQPR 426
N+I+W+G D E+ + L+ + L E +D++ + R
Sbjct: 189 NNIRWKGI-DDSRPGEVSDDMSILQADIEALSLQEHSVDQQISEMR 233
Score = 30.7 bits (66), Expect = 0.96
Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 407 DEPDNQDMCFVMDTEIQQ--CFQNDLVLVLEAPLGANLSIGTQPNKDRESNF 556
++ +NQ +V + +I+ CFQN ++ ++AP G L + P+ D +++
Sbjct: 241 EDENNQKWLYVTEDDIKSLPCFQNQTLIAIKAPHGTTLEV---PDPDEVNDY 289
>04_01_0069 -
697811-697876,697956-698166,698265-698359,698448-698513,
698595-698643,698720-698770,698856-698908,699263-699331,
699874-699928,700011-700099,700217-700302,700376-700432,
700575-700716,701637-702032
Length = 494
Score = 89.4 bits (212), Expect = 2e-18
Identities = 44/67 (65%), Positives = 52/67 (77%)
Frame = +1
Query: 109 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKRSK 288
RY+ SLGLLT KF++LL+ A+DG LDL A L V QKRRIYDITNVLEG+ LIEK K
Sbjct: 193 RYDSSLGLLTKKFINLLEGAEDGTLDLNKAAETLEV-QKRRIYDITNVLEGVDLIEKTLK 251
Query: 289 NSIQWRG 309
N I+W+G
Sbjct: 252 NMIRWKG 258
>06_01_0978 +
7595641-7595843,7595952-7596072,7596176-7596253,
7596371-7596436,7596556-7596688,7596774-7596841,
7596930-7597002,7597097-7597158,7597240-7597633,
7597768-7597832
Length = 420
Score = 64.1 bits (149), Expect = 8e-11
Identities = 34/71 (47%), Positives = 44/71 (61%)
Frame = +1
Query: 103 YKRYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKR 282
Y R +KSLGLL T FV+L + + L A L V ++RRIYDI NVLE IG++ +R
Sbjct: 55 YSRKQKSLGLLCTNFVALYDREDVESVGLDDAARRLGV-ERRRIYDIVNVLESIGMLVRR 113
Query: 283 SKNSIQWRGAG 315
+KN W G G
Sbjct: 114 AKNRYTWIGFG 124
Score = 40.3 bits (90), Expect = 0.001
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 9/66 (13%)
Frame = +1
Query: 109 RYEKSLGLLTTKFVSLLQKAKDGVLDL-KIATNLLA-------VRQK-RRIYDITNVLEG 261
R EKSLGLLT FV L + + L + A LL +R K RR+YDI NVL
Sbjct: 203 RKEKSLGLLTQNFVKLFLTMEIETISLDEAAKRLLGEGHAANNMRTKVRRLYDIANVLSS 262
Query: 262 IGLIEK 279
+ LIEK
Sbjct: 263 LNLIEK 268
>02_05_0690 -
30943184-30943305,30944048-30944459,30944549-30944610,
30944724-30944787,30944880-30944947,30945039-30945168,
30945276-30945341,30945794-30946369
Length = 499
Score = 41.1 bits (92), Expect = 7e-04
Identities = 28/63 (44%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +1
Query: 109 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLL-----AVRQK-RRIYDITNVLEGIGL 270
R EKSLGLLT FV L + + L A LL A K RR+YDI NVL +
Sbjct: 260 RKEKSLGLLTQNFVKLFLTMEVDTISLDEAAKLLLGEGHAENTKVRRLYDIANVLSSLNF 319
Query: 271 IEK 279
I+K
Sbjct: 320 IDK 322
Score = 32.7 bits (71), Expect = 0.24
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +1
Query: 139 TKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGL 270
+ FV+L + + L A L V ++RRIYDI NVLE +G+
Sbjct: 93 SSFVALYNRDDVESIGLDDAARRLGV-ERRRIYDIVNVLESVGV 135
>10_08_0158 -
15298902-15299111,15300557-15300655,15301375-15301443,
15301535-15301681,15301762-15301839,15302221-15302264,
15302521-15302603,15303394-15303620
Length = 318
Score = 36.3 bits (80), Expect = 0.019
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Frame = +1
Query: 223 KRRIYDITNVLEGIGLIEKRSKNSIQWRGAGPD--YDKNEIGKKVMGLR----KQLSYLD 384
+RR+YD NVL + +I K K IQW+G D E+ +++GL+ K+ +YL
Sbjct: 153 RRRVYDALNVLMAMDIISK-DKKEIQWKGLPRTSMSDVEELKTEIIGLKGRIDKKNAYLQ 211
Query: 385 EHE 393
E E
Sbjct: 212 ELE 214
>03_01_0367 +
2852287-2852603,2853202-2853278,2853388-2853431,
2854294-2854440,2854528-2854596,2854770-2854868,
2855155-2855193
Length = 263
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +1
Query: 223 KRRIYDITNVLEGIGLIEKRSKNSIQWRGAGPD--YDKNEIGKKVMGLRKQL 372
+RR+YD NVL + +I K K IQW+G D ++ +++GL+ ++
Sbjct: 155 RRRVYDALNVLMAMEIISK-DKKEIQWKGLPRTSINDIEDLQTELVGLKSRI 205
>01_06_0255 -
27918447-27918534,27918615-27918685,27919131-27919226,
27919335-27919403,27919489-27919629,27919708-27919761,
27920183-27920236,27920343-27920386,27921012-27921117,
27921197-27921258,27921358-27921679
Length = 368
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +1
Query: 223 KRRIYDITNVLEGIGLIEKRSKNSIQWRGAGPDYDKNEIGKKVMGLRKQLSYLDEHERLL 402
+RR+YD NVL I +I K K I+W G +Y +I K ++ ++ + ++LL
Sbjct: 221 RRRVYDAFNVLIAIRVIAK-DKKEIKWMGL-TNYRYEKIQKLEEVHKELITRIKNKKKLL 278
Query: 403 DRRTRQ 420
+Q
Sbjct: 279 QEIEKQ 284
>10_02_0105 - 5345149-5347833
Length = 894
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 235 YDITNVLEGIGLIEKRSKNSIQ--WRGAGPDYDKNEIGKKVMGLRKQLSYLDE 387
Y + V++ I +R K S+ G D E+GK + +RK++S + E
Sbjct: 71 YRVEEVIDNAHFIFRRRKTSVSKYTHIFGDSIDLREVGKNIQVIRKEISEIFE 123
>08_01_0601 - 5268520-5271112,5272448-5272950
Length = 1031
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 328 KNEIGKKVMGLRKQLSYLDEHERLLDRRTR 417
+ E+GKKV+ LR +L +L R DR+ R
Sbjct: 24 QTEVGKKVLELRHELEWLRTFLRDADRKRR 53
>05_07_0348 -
29444042-29444140,29444256-29444410,29445281-29445398,
29445483-29445546,29445657-29445739,29445830-29445941,
29446034-29446155
Length = 250
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 223 KRRIYDITNVLEGIGLIEKRSKNSIQWRGAGPDYDKNEIGK-KVMGLRKQLSYLDEHERL 399
+RR + V+ L+ S I+W + D DK E+ + +V LR +++ +E E
Sbjct: 43 RRRSWTPKRVMGAASLLHLLSLPRIRWSSSTEDDDKIELTRAEVESLRTEIADAEERESQ 102
Query: 400 LDRR 411
L R
Sbjct: 103 LKAR 106
>02_05_0886 +
32507324-32507938,32508103-32508252,32508498-32508935,
32509038-32509151,32509256-32509852
Length = 637
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +1
Query: 259 GIGLIEKRSKNSIQWRGAGPDYDKNEIGKKVMGLRKQL---SYLDEHERLLDRR 411
G G E +SK WR D ++ GK+ +GL L S D+ ++ ++ R
Sbjct: 274 GGGFPEAKSKEQAAWRRRSVGSDDSDCGKEDLGLSLSLGASSSYDDDQKAVEAR 327
>02_01_0447 -
3220489-3220560,3221287-3221420,3221500-3221731,
3221817-3222015,3222101-3222181,3222260-3222315,
3222493-3222623,3222700-3222847,3224151-3224321,
3224417-3224775,3224898-3225189
Length = 624
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 358 IPLPFYQFHFYHNRDLLLSIE 296
+P+ Y+FH H R+L LS +
Sbjct: 488 VPIGIYEFHALHGRNLFLSFQ 508
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,738,142
Number of Sequences: 37544
Number of extensions: 277010
Number of successful extensions: 651
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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