Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5c01
(616 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY028166-1|AAK19022.1| 342|Caenorhabditis elegans EFL-1 protein. 92 3e-19
AL031627-9|CAA20948.1| 342|Caenorhabditis elegans Hypothetical ... 92 3e-19
AY028167-1|AAK19023.1| 287|Caenorhabditis elegans EFL-2 protein. 66 2e-11
AL117203-19|CAN86631.1| 358|Caenorhabditis elegans Hypothetical... 66 2e-11
AL117203-18|CAN86630.1| 332|Caenorhabditis elegans Hypothetical... 66 2e-11
AL117203-17|CAN86629.1| 284|Caenorhabditis elegans Hypothetical... 66 2e-11
AL117203-16|CAB60421.1| 412|Caenorhabditis elegans Hypothetical... 66 2e-11
Z66520-10|CAA91391.2| 600|Caenorhabditis elegans Hypothetical p... 50 1e-06
Z68319-1|CAA92699.1| 598|Caenorhabditis elegans Hypothetical pr... 30 1.1
AY028165-1|AAK19021.1| 598|Caenorhabditis elegans DPL-1 protein. 30 1.1
U29376-5|AAA68709.2| 936|Caenorhabditis elegans Protein kinase ... 29 2.6
AC199172-1|ABO33276.1| 277|Caenorhabditis elegans F-box a prote... 29 3.5
AC006714-17|AAK39598.1| 277|Caenorhabditis elegans F-box a prot... 29 3.5
Z82261-5|CAH60756.1| 304|Caenorhabditis elegans Hypothetical pr... 28 6.1
U23515-12|ABB51178.1| 163|Caenorhabditis elegans Hypothetical p... 28 6.1
Z81541-4|CAD91634.1| 266|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z80344-3|CAB02488.2| 491|Caenorhabditis elegans Hypothetical pr... 27 8.1
AJ487543-1|CAD31791.1| 266|Caenorhabditis elegans farnesylated-... 27 8.1
>AY028166-1|AAK19022.1| 342|Caenorhabditis elegans EFL-1 protein.
Length = 342
Score = 91.9 bits (218), Expect = 3e-19
Identities = 54/114 (47%), Positives = 73/114 (64%), Gaps = 11/114 (9%)
Frame = +1
Query: 109 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKRSK 288
R +KSLGLL +F+ ++Q + G DL A L VRQKRRIYDITNVLEGIGLIEKRSK
Sbjct: 65 RADKSLGLLAKRFIRMIQYSPYGRCDLNTAAEALNVRQKRRIYDITNVLEGIGLIEKRSK 124
Query: 289 NSIQWRGAGPDYDKN-EIGK----------KVMGLRKQLSYLDEHERLLDRRTR 417
N IQW+G D+ N + GK ++ L+ ++ L++ E L+++R R
Sbjct: 125 NMIQWKGG--DFMLNVKEGKRQSATTEEEDRMEQLKAEIEQLNKEEELIEQRQR 176
>AL031627-9|CAA20948.1| 342|Caenorhabditis elegans Hypothetical
protein Y102A5C.18 protein.
Length = 342
Score = 91.9 bits (218), Expect = 3e-19
Identities = 54/114 (47%), Positives = 73/114 (64%), Gaps = 11/114 (9%)
Frame = +1
Query: 109 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKRSK 288
R +KSLGLL +F+ ++Q + G DL A L VRQKRRIYDITNVLEGIGLIEKRSK
Sbjct: 65 RADKSLGLLAKRFIRMIQYSPYGRCDLNTAAEALNVRQKRRIYDITNVLEGIGLIEKRSK 124
Query: 289 NSIQWRGAGPDYDKN-EIGK----------KVMGLRKQLSYLDEHERLLDRRTR 417
N IQW+G D+ N + GK ++ L+ ++ L++ E L+++R R
Sbjct: 125 NMIQWKGG--DFMLNVKEGKRQSATTEEEDRMEQLKAEIEQLNKEEELIEQRQR 176
>AY028167-1|AAK19023.1| 287|Caenorhabditis elegans EFL-2 protein.
Length = 287
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/93 (40%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Frame = +1
Query: 109 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKRSK 288
R ++SLGL+T +F+SL Q+ + VL+L L + KRR+YD+ NVLEG+G +EK K
Sbjct: 39 RSQQSLGLITQRFMSLRQRNE--VLNLNEVAKELNI-SKRRVYDVINVLEGLGYVEKVEK 95
Query: 289 NSIQWRGAGPD-YDKNEIGKKVMGLRKQLSYLD 384
N+I+W G + ++N + +V LR+Q L+
Sbjct: 96 NNIRWIGDNNNSEEQNALEARVEMLRQQEKLLE 128
>AL117203-19|CAN86631.1| 358|Caenorhabditis elegans Hypothetical
protein Y48C3A.17d protein.
Length = 358
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/93 (40%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Frame = +1
Query: 109 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKRSK 288
R ++SLGL+T +F+SL Q+ + VL+L L + KRR+YD+ NVLEG+G +EK K
Sbjct: 36 RSQQSLGLITQRFMSLRQRNE--VLNLNEVAKELNI-SKRRVYDVINVLEGLGYVEKVEK 92
Query: 289 NSIQWRGAGPD-YDKNEIGKKVMGLRKQLSYLD 384
N+I+W G + ++N + +V LR+Q L+
Sbjct: 93 NNIRWIGDNNNSEEQNALEARVEMLRQQEKLLE 125
>AL117203-18|CAN86630.1| 332|Caenorhabditis elegans Hypothetical
protein Y48C3A.17c protein.
Length = 332
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/93 (40%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Frame = +1
Query: 109 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKRSK 288
R ++SLGL+T +F+SL Q+ + VL+L L + KRR+YD+ NVLEG+G +EK K
Sbjct: 36 RSQQSLGLITQRFMSLRQRNE--VLNLNEVAKELNI-SKRRVYDVINVLEGLGYVEKVEK 92
Query: 289 NSIQWRGAGPD-YDKNEIGKKVMGLRKQLSYLD 384
N+I+W G + ++N + +V LR+Q L+
Sbjct: 93 NNIRWIGDNNNSEEQNALEARVEMLRQQEKLLE 125
>AL117203-17|CAN86629.1| 284|Caenorhabditis elegans Hypothetical
protein Y48C3A.17b protein.
Length = 284
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/93 (40%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Frame = +1
Query: 109 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKRSK 288
R ++SLGL+T +F+SL Q+ + VL+L L + KRR+YD+ NVLEG+G +EK K
Sbjct: 36 RSQQSLGLITQRFMSLRQRNE--VLNLNEVAKELNI-SKRRVYDVINVLEGLGYVEKVEK 92
Query: 289 NSIQWRGAGPD-YDKNEIGKKVMGLRKQLSYLD 384
N+I+W G + ++N + +V LR+Q L+
Sbjct: 93 NNIRWIGDNNNSEEQNALEARVEMLRQQEKLLE 125
>AL117203-16|CAB60421.1| 412|Caenorhabditis elegans Hypothetical
protein Y48C3A.17a protein.
Length = 412
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/93 (40%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Frame = +1
Query: 109 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVRQKRRIYDITNVLEGIGLIEKRSK 288
R ++SLGL+T +F+SL Q+ + VL+L L + KRR+YD+ NVLEG+G +EK K
Sbjct: 36 RSQQSLGLITQRFMSLRQRNE--VLNLNEVAKELNI-SKRRVYDVINVLEGLGYVEKVEK 92
Query: 289 NSIQWRGAGPD-YDKNEIGKKVMGLRKQLSYLD 384
N+I+W G + ++N + +V LR+Q L+
Sbjct: 93 NNIRWIGDNNNSEEQNALEARVEMLRQQEKLLE 125
>Z66520-10|CAA91391.2| 600|Caenorhabditis elegans Hypothetical
protein F49E12.6 protein.
Length = 600
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Frame = +1
Query: 109 RYEKSLGLLTTKFVSLLQKAKDGVLDLKIATNLLAVR---QKRRIYDITNVLEGIGLIEK 279
R EKSLGLL +F+ + + G ++ +A + +KRRIYDI NV+E + ++K
Sbjct: 95 RKEKSLGLLCQRFLIAINEETVGSSTREVHLETVARKMNVEKRRIYDIVNVMEALDAMQK 154
Query: 280 RSKNSIQWRG 309
+K+ QW+G
Sbjct: 155 TNKSYYQWQG 164
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +1
Query: 226 RRIYDITNVLEGIGLIEK 279
RR+YDI NVL +GLI+K
Sbjct: 309 RRLYDIANVLVALGLIKK 326
>Z68319-1|CAA92699.1| 598|Caenorhabditis elegans Hypothetical
protein T23G7.1 protein.
Length = 598
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 223 KRRIYDITNVLEGIGLIEKRSKNSIQWRG 309
+RR+YD NVL + +I K SK I+W G
Sbjct: 125 RRRVYDALNVLLAMNIITK-SKKDIRWIG 152
>AY028165-1|AAK19021.1| 598|Caenorhabditis elegans DPL-1 protein.
Length = 598
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 223 KRRIYDITNVLEGIGLIEKRSKNSIQWRG 309
+RR+YD NVL + +I K SK I+W G
Sbjct: 125 RRRVYDALNVLLAMNIITK-SKKDIRWIG 152
>U29376-5|AAA68709.2| 936|Caenorhabditis elegans Protein kinase c
protein 2, isoformc protein.
Length = 936
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = -1
Query: 451 FSIHD-KTHILVVWFVYLIIFHVHPNSLIVFLIPLPFYQFHFYHNRDLLLSIECYFYFVF 275
F + D + HI V F++LI+ P L+ +L L H+ LLLS +F F+F
Sbjct: 815 FYVKDVEPHIFYVLFIFLIL---RPFLLLPYLSHLQL-TLSAIHSPLLLLSASVFFKFLF 870
Query: 274 QSN 266
++N
Sbjct: 871 KNN 873
>AC199172-1|ABO33276.1| 277|Caenorhabditis elegans F-box a protein
protein 151 protein.
Length = 277
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 103 ILNQSLPKLNRKHRFFVKLSVKILRR 26
+LN+ L KL KHR V+ +ILRR
Sbjct: 10 VLNEILSKLEPKHRLVVRKVCRILRR 35
>AC006714-17|AAK39598.1| 277|Caenorhabditis elegans F-box a protein
protein 78 protein.
Length = 277
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 103 ILNQSLPKLNRKHRFFVKLSVKILRR 26
+LN+ L KL KHR V+ +ILRR
Sbjct: 10 VLNEILSKLEPKHRLVVRKVCRILRR 35
>Z82261-5|CAH60756.1| 304|Caenorhabditis elegans Hypothetical
protein C35D6.9a protein.
Length = 304
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -1
Query: 421 VVWFVYLIIFHVHPNSLIVFLIPLPFYQFHFYHNR 317
VV +V IIF S+I+FLI PFY + F NR
Sbjct: 11 VVKYVNAIIFCA---SIIMFLIVFPFYVYVFKMNR 42
>U23515-12|ABB51178.1| 163|Caenorhabditis elegans Hypothetical
protein R144.13 protein.
Length = 163
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 506 ANLSIGTQPNKDRESNFLLHIKSSESMGVVLLND 607
A L IG P ++ S+ ++HIK S VV+ ND
Sbjct: 48 ATLEIGFPPLSEKYSSRVIHIKPSVVHSVVIEND 81
>Z81541-4|CAD91634.1| 266|Caenorhabditis elegans Hypothetical
protein F48F5.5 protein.
Length = 266
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -1
Query: 400 IIFHVHPNSLIVFLIPLPFYQFHFYH 323
++ HV+ ++ + L P+PF HF+H
Sbjct: 142 LMAHVYGPTMTILLNPIPFAASHFHH 167
>Z80344-3|CAB02488.2| 491|Caenorhabditis elegans Hypothetical
protein F15D4.5 protein.
Length = 491
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 612 SLSFSNTTPIDSDDLM*SKKFDSLSLFGCVPIDKFAPNGASKT 484
S+ N++P+ DD + D S+F C P +K P KT
Sbjct: 131 SIHSDNSSPLKVDDKLSDNSEDHNSIFECTP-EKLLPTDHPKT 172
>AJ487543-1|CAD31791.1| 266|Caenorhabditis elegans
farnesylated-proteins convertingenzyme-2 protein.
Length = 266
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -1
Query: 400 IIFHVHPNSLIVFLIPLPFYQFHFYH 323
++ HV+ ++ + L P+PF HF+H
Sbjct: 142 LMAHVYGPTMTILLNPIPFAASHFHH 167
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,665,814
Number of Sequences: 27780
Number of extensions: 280985
Number of successful extensions: 742
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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