Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5b23
(670 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC056893-1|AAH56893.1| 1564|Homo sapiens KIAA0372 protein. 72 2e-12
AB002370-1|BAA20827.2| 1568|Homo sapiens KIAA0372 protein. 72 2e-12
BC032856-1|AAH32856.1| 1121|Homo sapiens tetratricopeptide repea... 37 0.075
AL512656-5|CAI15294.1| 1121|Homo sapiens tetratricopeptide repea... 37 0.075
AL512656-3|CAI15293.1| 498|Homo sapiens tetratricopeptide repea... 37 0.075
AK098631-1|BAC05358.1| 480|Homo sapiens protein ( Homo sapiens ... 37 0.075
BC101721-1|AAI01722.1| 864|Homo sapiens NMDA receptor regulated... 36 0.17
BC101719-1|AAI01720.1| 864|Homo sapiens NMDA receptor regulated... 36 0.17
BC064592-1|AAH64592.1| 429|Homo sapiens NARG1L protein protein. 36 0.17
BC032318-1|AAH32318.1| 311|Homo sapiens NMDA receptor regulated... 36 0.17
AL731858-4|CAH73370.1| 864|Homo sapiens NMDA receptor regulated... 36 0.17
AL590665-1|CAH71511.1| 864|Homo sapiens NMDA receptor regulated... 36 0.17
AL354696-8|CAI16619.1| 864|Homo sapiens NMDA receptor regulated... 36 0.17
AK097224-1|BAC04980.1| 516|Homo sapiens protein ( Homo sapiens ... 36 0.17
AF311312-1|AAG23967.1| 926|Homo sapiens infertility-related spe... 36 0.17
AY358798-1|AAQ89158.1| 73|Homo sapiens FRSS1829 protein. 33 1.2
BC042083-1|AAH42083.1| 774|Homo sapiens transmembrane and tetra... 31 2.8
AK055962-1|BAB71057.1| 645|Homo sapiens UBUNIT (EC 2.4.1.-). p... 31 2.8
D63875-1|BAA09925.2| 1195|Homo sapiens KIAA0155 protein. 31 3.7
BC058914-1|AAH58914.1| 1173|Homo sapiens Ctr9, Paf1/RNA polymera... 31 3.7
U00001-1|AAA60471.1| 823|Homo sapiens CDC27 protein. 31 4.9
S78234-1|AAB34378.1| 824|Homo sapiens H-NUC protein. 31 4.9
BC020107-1|AAH20107.1| 1156|Homo sapiens nucleoporin 133kDa prot... 31 4.9
BC011656-1|AAH11656.1| 830|Homo sapiens CDC27 protein protein. 31 4.9
AY518321-1|AAR89911.1| 824|Homo sapiens cell division cycle 27 ... 31 4.9
AL160004-2|CAI19048.1| 1156|Homo sapiens nucleoporin 133kDa prot... 30 6.5
AL160004-1|CAI19047.1| 1068|Homo sapiens nucleoporin 133kDa prot... 30 6.5
AL139252-2|CAI22354.1| 1156|Homo sapiens nucleoporin 133kDa prot... 30 6.5
AL139252-1|CAI22353.1| 1068|Homo sapiens nucleoporin 133kDa prot... 30 6.5
AL121990-3|CAI22011.1| 1156|Homo sapiens nucleoporin 133kDa prot... 30 6.5
AL121990-2|CAI22010.1| 1068|Homo sapiens nucleoporin 133kDa prot... 30 6.5
AK001676-1|BAA91829.1| 1156|Homo sapiens protein ( Homo sapiens ... 30 6.5
BC063791-1|AAH63791.1| 843|Homo sapiens tetratricopeptide repea... 30 8.6
BC001248-1|AAH01248.2| 778|Homo sapiens TTC27 protein protein. 30 8.6
AK027570-1|BAB55206.1| 843|Homo sapiens protein ( Homo sapiens ... 30 8.6
AK000665-1|BAA91315.1| 508|Homo sapiens protein ( Homo sapiens ... 30 8.6
AK000279-1|BAA91048.1| 629|Homo sapiens protein ( Homo sapiens ... 30 8.6
>BC056893-1|AAH56893.1| 1564|Homo sapiens KIAA0372 protein.
Length = 1564
Score = 72.1 bits (169), Expect = 2e-12
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 5/118 (4%)
Frame = +3
Query: 195 DIKQLLKEARKHIDEKNYKDAQECCKNLLRKDKQNYFGLVLLG---KSFQDSDQACLAYQ 365
++K LK AR I K YK+A + CK +L+++K NY V +G + DQA AY+
Sbjct: 5 EVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQSAYK 64
Query: 366 KAIACKPSHPLAWLGLASYYEAHDDQIMNVKLLPVYVEILKL--QIEEEKALEIISKI 533
KA +P LAW GLA+ YE ++ L VY ++L L ++++K ++ K+
Sbjct: 65 KAAELEPDQLLAWQGLANLYEKYNHINAKDDLPGVYQKLLDLYESVDKQKWCDVCKKL 122
Score = 29.9 bits (64), Expect = 8.6
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 243 NYKDAQECCKNLLRKDKQNYFGLVLLGKSF---QDSDQACLAYQKAIACKPSHPLAWLGL 413
NY AQ C ++ ++ N LG + ++ +QA A++ A + PS+ + W+G
Sbjct: 842 NYALAQHCFIKSIQSEQINAVAWTNLGVLYLTNENIEQAHEAFKMAQSLDPSYLMCWIGQ 901
Query: 414 ASYYEA 431
A EA
Sbjct: 902 ALIAEA 907
>AB002370-1|BAA20827.2| 1568|Homo sapiens KIAA0372 protein.
Length = 1568
Score = 72.1 bits (169), Expect = 2e-12
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 5/118 (4%)
Frame = +3
Query: 195 DIKQLLKEARKHIDEKNYKDAQECCKNLLRKDKQNYFGLVLLG---KSFQDSDQACLAYQ 365
++K LK AR I K YK+A + CK +L+++K NY V +G + DQA AY+
Sbjct: 9 EVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQSAYK 68
Query: 366 KAIACKPSHPLAWLGLASYYEAHDDQIMNVKLLPVYVEILKL--QIEEEKALEIISKI 533
KA +P LAW GLA+ YE ++ L VY ++L L ++++K ++ K+
Sbjct: 69 KAAELEPDQLLAWQGLANLYEKYNHINAKDDLPGVYQKLLDLYESVDKQKWCDVCKKL 126
Score = 29.9 bits (64), Expect = 8.6
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 243 NYKDAQECCKNLLRKDKQNYFGLVLLGKSF---QDSDQACLAYQKAIACKPSHPLAWLGL 413
NY AQ C ++ ++ N LG + ++ +QA A++ A + PS+ + W+G
Sbjct: 846 NYALAQHCFIKSIQSEQINAVAWTNLGVLYLTNENIEQAHEAFKMAQSLDPSYLMCWIGQ 905
Query: 414 ASYYEA 431
A EA
Sbjct: 906 ALIAEA 911
>BC032856-1|AAH32856.1| 1121|Homo sapiens tetratricopeptide repeat
domain 18 protein.
Length = 1121
Score = 36.7 bits (81), Expect = 0.075
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +3
Query: 231 IDEKNYKDAQECCKNLLRKDKQNYFGLVLLGKS---FQDSDQACLAYQKAIACKPSHPLA 401
+ E N K AQEC + L ++ + L+L G ++ +QA + ++ A +P++ +A
Sbjct: 681 LTEDNIK-AQECFQKALSLNQSHIHSLLLCGVLAVLLENYEQAEIFFEDATCLEPTNVVA 739
Query: 402 WLGLASYYEAHDDQI 446
W L YYE ++ I
Sbjct: 740 WTLLGLYYEIQNNDI 754
>AL512656-5|CAI15294.1| 1121|Homo sapiens tetratricopeptide
repeat-containing protein (LOC118491) protein.
Length = 1121
Score = 36.7 bits (81), Expect = 0.075
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +3
Query: 231 IDEKNYKDAQECCKNLLRKDKQNYFGLVLLGKS---FQDSDQACLAYQKAIACKPSHPLA 401
+ E N K AQEC + L ++ + L+L G ++ +QA + ++ A +P++ +A
Sbjct: 681 LTEDNIK-AQECFQKALSLNQSHIHSLLLCGVLAVLLENYEQAEIFFEDATCLEPTNVVA 739
Query: 402 WLGLASYYEAHDDQI 446
W L YYE ++ I
Sbjct: 740 WTLLGLYYEIQNNDI 754
>AL512656-3|CAI15293.1| 498|Homo sapiens tetratricopeptide
repeat-containing protein (LOC118491) protein.
Length = 498
Score = 36.7 bits (81), Expect = 0.075
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +3
Query: 231 IDEKNYKDAQECCKNLLRKDKQNYFGLVLLGKS---FQDSDQACLAYQKAIACKPSHPLA 401
+ E N K AQEC + L ++ + L+L G ++ +QA + ++ A +P++ +A
Sbjct: 88 LTEDNIK-AQECFQKALSLNQSHIHSLLLCGVLAVLLENYEQAEIFFEDATCLEPTNVVA 146
Query: 402 WLGLASYYEAHDDQI 446
W L YYE ++ I
Sbjct: 147 WTLLGLYYEIQNNDI 161
>AK098631-1|BAC05358.1| 480|Homo sapiens protein ( Homo sapiens
cDNA FLJ25765 fis, clone TST06337. ).
Length = 480
Score = 36.7 bits (81), Expect = 0.075
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +3
Query: 231 IDEKNYKDAQECCKNLLRKDKQNYFGLVLLGKS---FQDSDQACLAYQKAIACKPSHPLA 401
+ E N K AQEC + L ++ + L+L G ++ +QA + ++ A +P++ +A
Sbjct: 70 LTEDNIK-AQECFQKALSLNQSHIHSLLLCGVLAVLLENYEQAEIFFEDATCLEPTNVVA 128
Query: 402 WLGLASYYEAHDDQI 446
W L YYE ++ I
Sbjct: 129 WTLLGLYYEIQNNDI 143
>BC101721-1|AAI01722.1| 864|Homo sapiens NMDA receptor regulated
1-like protein.
Length = 864
Score = 35.5 bits (78), Expect = 0.17
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 237 EKNYKDAQECCKNLLRKDKQNYF---GLVLLGKSFQDSDQACLAYQKAIACKPSHPLAWL 407
+K Y +A +C +N L+ DK N L LL +D + + + +P+ +W+
Sbjct: 93 DKKYDEAIKCYRNALKLDKDNLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPTQRASWI 152
Query: 408 GLASYYEAHDDQIMNVKLL 464
G A Y D M +KLL
Sbjct: 153 GYAIAYHLLKDYDMALKLL 171
>BC101719-1|AAI01720.1| 864|Homo sapiens NMDA receptor regulated
1-like protein.
Length = 864
Score = 35.5 bits (78), Expect = 0.17
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 237 EKNYKDAQECCKNLLRKDKQNYF---GLVLLGKSFQDSDQACLAYQKAIACKPSHPLAWL 407
+K Y +A +C +N L+ DK N L LL +D + + + +P+ +W+
Sbjct: 93 DKKYDEAIKCYRNALKLDKDNLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPTQRASWI 152
Query: 408 GLASYYEAHDDQIMNVKLL 464
G A Y D M +KLL
Sbjct: 153 GYAIAYHLLKDYDMALKLL 171
>BC064592-1|AAH64592.1| 429|Homo sapiens NARG1L protein protein.
Length = 429
Score = 35.5 bits (78), Expect = 0.17
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 237 EKNYKDAQECCKNLLRKDKQNYF---GLVLLGKSFQDSDQACLAYQKAIACKPSHPLAWL 407
+K Y +A +C +N L+ DK N L LL +D + + + +P+ +W+
Sbjct: 93 DKKYDEAIKCYRNALKLDKDNLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPTQRASWI 152
Query: 408 GLASYYEAHDDQIMNVKLL 464
G A Y D M +KLL
Sbjct: 153 GYAIAYHLLKDYDMALKLL 171
>BC032318-1|AAH32318.1| 311|Homo sapiens NMDA receptor regulated
1-like protein.
Length = 311
Score = 35.5 bits (78), Expect = 0.17
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 237 EKNYKDAQECCKNLLRKDKQNYF---GLVLLGKSFQDSDQACLAYQKAIACKPSHPLAWL 407
+K Y +A +C +N L+ DK N L LL +D + + + +P+ +W+
Sbjct: 93 DKKYDEAIKCYRNALKLDKDNLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPTQRASWI 152
Query: 408 GLASYYEAHDDQIMNVKLL 464
G A Y D M +KLL
Sbjct: 153 GYAIAYHLLKDYDMALKLL 171
>AL731858-4|CAH73370.1| 864|Homo sapiens NMDA receptor regulated
1-like protein.
Length = 864
Score = 35.5 bits (78), Expect = 0.17
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 237 EKNYKDAQECCKNLLRKDKQNYF---GLVLLGKSFQDSDQACLAYQKAIACKPSHPLAWL 407
+K Y +A +C +N L+ DK N L LL +D + + + +P+ +W+
Sbjct: 93 DKKYDEAIKCYRNALKLDKDNLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPTQRASWI 152
Query: 408 GLASYYEAHDDQIMNVKLL 464
G A Y D M +KLL
Sbjct: 153 GYAIAYHLLKDYDMALKLL 171
>AL590665-1|CAH71511.1| 864|Homo sapiens NMDA receptor regulated
1-like protein.
Length = 864
Score = 35.5 bits (78), Expect = 0.17
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 237 EKNYKDAQECCKNLLRKDKQNYF---GLVLLGKSFQDSDQACLAYQKAIACKPSHPLAWL 407
+K Y +A +C +N L+ DK N L LL +D + + + +P+ +W+
Sbjct: 93 DKKYDEAIKCYRNALKLDKDNLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPTQRASWI 152
Query: 408 GLASYYEAHDDQIMNVKLL 464
G A Y D M +KLL
Sbjct: 153 GYAIAYHLLKDYDMALKLL 171
>AL354696-8|CAI16619.1| 864|Homo sapiens NMDA receptor regulated
1-like protein.
Length = 864
Score = 35.5 bits (78), Expect = 0.17
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 237 EKNYKDAQECCKNLLRKDKQNYF---GLVLLGKSFQDSDQACLAYQKAIACKPSHPLAWL 407
+K Y +A +C +N L+ DK N L LL +D + + + +P+ +W+
Sbjct: 93 DKKYDEAIKCYRNALKLDKDNLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPTQRASWI 152
Query: 408 GLASYYEAHDDQIMNVKLL 464
G A Y D M +KLL
Sbjct: 153 GYAIAYHLLKDYDMALKLL 171
>AK097224-1|BAC04980.1| 516|Homo sapiens protein ( Homo sapiens
cDNA FLJ39905 fis, clone SPLEN2017351, moderately
similar to Xenopus laevis N-terminal acetyltransferase
mRNA. ).
Length = 516
Score = 35.5 bits (78), Expect = 0.17
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 237 EKNYKDAQECCKNLLRKDKQNYF---GLVLLGKSFQDSDQACLAYQKAIACKPSHPLAWL 407
+K Y +A +C +N L+ DK N L LL +D + + + +P+ +W+
Sbjct: 93 DKKYDEAIKCYRNALKLDKDNLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPTQRASWI 152
Query: 408 GLASYYEAHDDQIMNVKLL 464
G A Y D M +KLL
Sbjct: 153 GYAIAYHLLKDYDMALKLL 171
>AF311312-1|AAG23967.1| 926|Homo sapiens infertility-related sperm
protein protein.
Length = 926
Score = 35.5 bits (78), Expect = 0.17
Identities = 43/164 (26%), Positives = 67/164 (40%), Gaps = 11/164 (6%)
Frame = +3
Query: 201 KQLLKEARKHIDEKNYKDA----QECCK------NLLRKDKQNYFGLVLLGKSFQDSDQA 350
K L +E + +++KNYKDA EC K + Y L ++ QD DQA
Sbjct: 624 KALKEEGNQCVNDKNYKDALSKYSECLKINNTECAIYTNRALCYLKLCQFEEAKQDCDQA 683
Query: 351 CLAYQKAIACKPSHPLAWLGLASYYEAHDDQIMNVKLLPVYVEILKLQIEE-EKALEIIS 527
+ LA GL +Y ++ D + L P +E K+++EE + L +
Sbjct: 684 LQLADGNVKAFYRRALAHKGLKNYQKSLIDLNKVILLDPSIIE-AKMELEEVTRLLNLKD 742
Query: 528 KIGKLGVRYKNGDVVETLINYLKEEPPTTLRKSAEEQLICLINE 659
K + + +N KEEP R + E CL +E
Sbjct: 743 KTAPFNKEKERRKIEIQEVNEGKEEPG---RPAGEVSTGCLASE 783
>AY358798-1|AAQ89158.1| 73|Homo sapiens FRSS1829 protein.
Length = 73
Score = 32.7 bits (71), Expect = 1.2
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -1
Query: 256 ASL*FFSSICFLASFNSCLISAIFYE-CYLIIFNLNCIFGETL 131
+SL F+ +C L+ F LIS+I+ E C L IF+ C +G +L
Sbjct: 4 SSLLFWPPLCLLSLFLLILISSIYSESCKLEIFHFACQWGRSL 46
>BC042083-1|AAH42083.1| 774|Homo sapiens transmembrane and
tetratricopeptide repeat containing 1 protein.
Length = 774
Score = 31.5 bits (68), Expect = 2.8
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 5/124 (4%)
Frame = +3
Query: 234 DEKNYKDAQECCKNLLRK-----DKQNYFGLVLLGKSFQDSDQACLAYQKAIACKPSHPL 398
+++ +K+A+E + ++ D N +G+ L+ + +A YQ+AI PSH +
Sbjct: 486 EQERFKEAEEIYQTGIKNCPDSSDLHNNYGVFLVDTGLPE--KAVAHYQQAIKLSPSHHV 543
Query: 399 AWLGLASYYEAHDDQIMNVKLLPVYVEILKLQIEEEKALEIISKIGKLGVRYKNGDVVET 578
A + L Y + + M E K ++ EI+S +G L Y G E
Sbjct: 544 AMVNLGRLYRSLGENSM-------AEEWYKRALQVAHKAEILSPLGAL--YYNTGRYEEA 594
Query: 579 LINY 590
L Y
Sbjct: 595 LQIY 598
>AK055962-1|BAB71057.1| 645|Homo sapiens UBUNIT (EC 2.4.1.-).
protein.
Length = 645
Score = 31.5 bits (68), Expect = 2.8
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 5/124 (4%)
Frame = +3
Query: 234 DEKNYKDAQECCKNLLRK-----DKQNYFGLVLLGKSFQDSDQACLAYQKAIACKPSHPL 398
+++ +K+A+E + ++ D N +G+ L+ + +A YQ+AI PSH +
Sbjct: 357 EQERFKEAEEIYQTGIKNCPDSSDLHNNYGVFLVDTGLPE--KAVAHYQQAIKLSPSHHV 414
Query: 399 AWLGLASYYEAHDDQIMNVKLLPVYVEILKLQIEEEKALEIISKIGKLGVRYKNGDVVET 578
A + L Y + + M E K ++ EI+S +G L Y G E
Sbjct: 415 AMVNLGRLYRSLGENSM-------AEEWYKRALQVAHKAEILSPLGAL--YYNTGRYEEA 465
Query: 579 LINY 590
L Y
Sbjct: 466 LQIY 469
>D63875-1|BAA09925.2| 1195|Homo sapiens KIAA0155 protein.
Length = 1195
Score = 31.1 bits (67), Expect = 3.7
Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Frame = +3
Query: 249 KDAQECCKNLLRKDKQNYFGLVLLGKSF---QDSDQACLA---YQKAIACKPSHPLAWLG 410
++A +C + +L+ NY + +LG + +D ++ +A +K P AW+
Sbjct: 380 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 439
Query: 411 LASYYEAHDDQIMNVKLLPVYVEILKLQIEEEKALEIISKIGKLGVRYKN 560
LA E D Q + IL+ +++ + EI++ +G L R N
Sbjct: 440 LAQILEQTDIQ-GALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGN 488
>BC058914-1|AAH58914.1| 1173|Homo sapiens Ctr9, Paf1/RNA polymerase
II complex component, homolog (S. cerevisiae) protein.
Length = 1173
Score = 31.1 bits (67), Expect = 3.7
Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Frame = +3
Query: 249 KDAQECCKNLLRKDKQNYFGLVLLGKSF---QDSDQACLA---YQKAIACKPSHPLAWLG 410
++A +C + +L+ NY + +LG + +D ++ +A +K P AW+
Sbjct: 358 ENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIE 417
Query: 411 LASYYEAHDDQIMNVKLLPVYVEILKLQIEEEKALEIISKIGKLGVRYKN 560
LA E D Q + IL+ +++ + EI++ +G L R N
Sbjct: 418 LAQILEQTDIQ-GALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGN 466
>U00001-1|AAA60471.1| 823|Homo sapiens CDC27 protein.
Length = 823
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +3
Query: 297 NY-FGLVLLGKSF---QDSDQACLAYQKAIACKPSHPLAWLGLASYY 425
NY + LLG F ++ D+A ++ AI P H AW GL Y
Sbjct: 598 NYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHYNAWYGLGMIY 644
>S78234-1|AAB34378.1| 824|Homo sapiens H-NUC protein.
Length = 824
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +3
Query: 297 NY-FGLVLLGKSF---QDSDQACLAYQKAIACKPSHPLAWLGLASYY 425
NY + LLG F ++ D+A ++ AI P H AW GL Y
Sbjct: 599 NYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHYNAWYGLGMIY 645
>BC020107-1|AAH20107.1| 1156|Homo sapiens nucleoporin 133kDa
protein.
Length = 1156
Score = 30.7 bits (66), Expect = 4.9
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +3
Query: 195 DIKQLLKEARKHI---DEKNYKDAQECCKNLLRKDKQNYFGLVLLGKSFQDSDQACLAYQ 365
DI + LKE E NY+ +E KQN GLV+L ++ +D CL Y
Sbjct: 311 DINRALKENITDAIWGSESNYEAIKEGVNIRYLDFKQNCDGLVILAAAWHSADNPCLIYY 370
Query: 366 KAI 374
I
Sbjct: 371 SLI 373
>BC011656-1|AAH11656.1| 830|Homo sapiens CDC27 protein protein.
Length = 830
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +3
Query: 297 NY-FGLVLLGKSF---QDSDQACLAYQKAIACKPSHPLAWLGLASYY 425
NY + LLG F ++ D+A ++ AI P H AW GL Y
Sbjct: 605 NYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHYNAWYGLGMIY 651
>AY518321-1|AAR89911.1| 824|Homo sapiens cell division cycle 27
protein.
Length = 824
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +3
Query: 297 NY-FGLVLLGKSF---QDSDQACLAYQKAIACKPSHPLAWLGLASYY 425
NY + LLG F ++ D+A ++ AI P H AW GL Y
Sbjct: 599 NYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHYNAWYGLGMIY 645
>AL160004-2|CAI19048.1| 1156|Homo sapiens nucleoporin 133kDa
protein.
Length = 1156
Score = 30.3 bits (65), Expect = 6.5
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +3
Query: 195 DIKQLLKEARKHI---DEKNYKDAQECCKNLLRKDKQNYFGLVLLGKSFQDSDQACLAYQ 365
DI + LKE E NY+ +E KQN GLV+L ++ +D CL Y
Sbjct: 311 DINRALKENITDAIWGSESNYEAIKEGVNIRYLDLKQNCDGLVILAAAWHSADNPCLIYY 370
Query: 366 KAI 374
I
Sbjct: 371 SLI 373
>AL160004-1|CAI19047.1| 1068|Homo sapiens nucleoporin 133kDa
protein.
Length = 1068
Score = 30.3 bits (65), Expect = 6.5
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +3
Query: 195 DIKQLLKEARKHI---DEKNYKDAQECCKNLLRKDKQNYFGLVLLGKSFQDSDQACLAYQ 365
DI + LKE E NY+ +E KQN GLV+L ++ +D CL Y
Sbjct: 311 DINRALKENITDAIWGSESNYEAIKEGVNIRYLDLKQNCDGLVILAAAWHSADNPCLIYY 370
Query: 366 KAI 374
I
Sbjct: 371 SLI 373
>AL139252-2|CAI22354.1| 1156|Homo sapiens nucleoporin 133kDa
protein.
Length = 1156
Score = 30.3 bits (65), Expect = 6.5
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +3
Query: 195 DIKQLLKEARKHI---DEKNYKDAQECCKNLLRKDKQNYFGLVLLGKSFQDSDQACLAYQ 365
DI + LKE E NY+ +E KQN GLV+L ++ +D CL Y
Sbjct: 311 DINRALKENITDAIWGSESNYEAIKEGVNIRYLDLKQNCDGLVILAAAWHSADNPCLIYY 370
Query: 366 KAI 374
I
Sbjct: 371 SLI 373
>AL139252-1|CAI22353.1| 1068|Homo sapiens nucleoporin 133kDa
protein.
Length = 1068
Score = 30.3 bits (65), Expect = 6.5
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +3
Query: 195 DIKQLLKEARKHI---DEKNYKDAQECCKNLLRKDKQNYFGLVLLGKSFQDSDQACLAYQ 365
DI + LKE E NY+ +E KQN GLV+L ++ +D CL Y
Sbjct: 311 DINRALKENITDAIWGSESNYEAIKEGVNIRYLDLKQNCDGLVILAAAWHSADNPCLIYY 370
Query: 366 KAI 374
I
Sbjct: 371 SLI 373
>AL121990-3|CAI22011.1| 1156|Homo sapiens nucleoporin 133kDa
protein.
Length = 1156
Score = 30.3 bits (65), Expect = 6.5
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +3
Query: 195 DIKQLLKEARKHI---DEKNYKDAQECCKNLLRKDKQNYFGLVLLGKSFQDSDQACLAYQ 365
DI + LKE E NY+ +E KQN GLV+L ++ +D CL Y
Sbjct: 311 DINRALKENITDAIWGSESNYEAIKEGVNIRYLDLKQNCDGLVILAAAWHSADNPCLIYY 370
Query: 366 KAI 374
I
Sbjct: 371 SLI 373
>AL121990-2|CAI22010.1| 1068|Homo sapiens nucleoporin 133kDa
protein.
Length = 1068
Score = 30.3 bits (65), Expect = 6.5
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +3
Query: 195 DIKQLLKEARKHI---DEKNYKDAQECCKNLLRKDKQNYFGLVLLGKSFQDSDQACLAYQ 365
DI + LKE E NY+ +E KQN GLV+L ++ +D CL Y
Sbjct: 311 DINRALKENITDAIWGSESNYEAIKEGVNIRYLDLKQNCDGLVILAAAWHSADNPCLIYY 370
Query: 366 KAI 374
I
Sbjct: 371 SLI 373
>AK001676-1|BAA91829.1| 1156|Homo sapiens protein ( Homo sapiens
cDNA FLJ10814 fis, clone NT2RP4000984. ).
Length = 1156
Score = 30.3 bits (65), Expect = 6.5
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +3
Query: 195 DIKQLLKEARKHI---DEKNYKDAQECCKNLLRKDKQNYFGLVLLGKSFQDSDQACLAYQ 365
DI + LKE E NY+ +E KQN GLV+L ++ +D CL Y
Sbjct: 311 DINRALKENITDAIWGSESNYEAIKEGVNIRYLDLKQNCDGLVILAAAWHSADNPCLIYY 370
Query: 366 KAI 374
I
Sbjct: 371 SLI 373
>BC063791-1|AAH63791.1| 843|Homo sapiens tetratricopeptide repeat
domain 27 protein.
Length = 843
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/73 (20%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +3
Query: 216 EARKHIDEKNYKDAQECCKNLLRKDKQN---YFGLVLLGKSFQDSDQACLAYQKAIACKP 386
+A H+ K +++ EC + ++ + +F L + +D + A+Q+ + +P
Sbjct: 533 KALLHLRNKEFQECVECFERSVKINPMQLGVWFSLGCAYLALEDYQGSAKAFQRCVTLEP 592
Query: 387 SHPLAWLGLASYY 425
+ AW L++ Y
Sbjct: 593 DNAEAWNNLSTSY 605
>BC001248-1|AAH01248.2| 778|Homo sapiens TTC27 protein protein.
Length = 778
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/73 (20%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +3
Query: 216 EARKHIDEKNYKDAQECCKNLLRKDKQN---YFGLVLLGKSFQDSDQACLAYQKAIACKP 386
+A H+ K +++ EC + ++ + +F L + +D + A+Q+ + +P
Sbjct: 468 KALLHLRNKEFQECVECFERSVKINPMQLGVWFSLGCAYLALEDYQGSAKAFQRCVTLEP 527
Query: 387 SHPLAWLGLASYY 425
+ AW L++ Y
Sbjct: 528 DNAEAWNNLSTSY 540
>AK027570-1|BAB55206.1| 843|Homo sapiens protein ( Homo sapiens
cDNA FLJ14664 fis, clone NT2RP2002880. ).
Length = 843
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/73 (20%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +3
Query: 216 EARKHIDEKNYKDAQECCKNLLRKDKQN---YFGLVLLGKSFQDSDQACLAYQKAIACKP 386
+A H+ K +++ EC + ++ + +F L + +D + A+Q+ + +P
Sbjct: 533 KALLHLRNKEFQECVECFERSVKINPMQLGVWFSLGCAYLALEDYQGSAKAFQRCVTLEP 592
Query: 387 SHPLAWLGLASYY 425
+ AW L++ Y
Sbjct: 593 DNAEAWNNLSTSY 605
>AK000665-1|BAA91315.1| 508|Homo sapiens protein ( Homo sapiens
cDNA FLJ20658 fis, clone KAT00985. ).
Length = 508
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/73 (20%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +3
Query: 216 EARKHIDEKNYKDAQECCKNLLRKDKQN---YFGLVLLGKSFQDSDQACLAYQKAIACKP 386
+A H+ K +++ EC + ++ + +F L + +D + A+Q+ + +P
Sbjct: 198 KALLHLRNKEFQECVECFERSVKINPMQLGAWFSLGCAYLALEDYQGSAKAFQRCVTLEP 257
Query: 387 SHPLAWLGLASYY 425
+ AW L++ Y
Sbjct: 258 DNAEAWNNLSTSY 270
>AK000279-1|BAA91048.1| 629|Homo sapiens protein ( Homo sapiens
cDNA FLJ20272 fis, clone HEP01722. ).
Length = 629
Score = 29.9 bits (64), Expect = 8.6
Identities = 15/73 (20%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +3
Query: 216 EARKHIDEKNYKDAQECCKNLLRKDKQN---YFGLVLLGKSFQDSDQACLAYQKAIACKP 386
+A H+ K +++ EC + ++ + +F L + +D + A+Q+ + +P
Sbjct: 319 KALLHLRNKEFQECVECFERSVKINPMQLGVWFSLGCAYLALEDYQGSAKAFQRCVTLEP 378
Query: 387 SHPLAWLGLASYY 425
+ AW L++ Y
Sbjct: 379 DNAEAWNNLSTSY 391
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,229,956
Number of Sequences: 237096
Number of extensions: 1438663
Number of successful extensions: 3184
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 3068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3182
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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