Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5b23
         (670 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT014631-1|AAT27255.1|  890|Drosophila melanogaster SD09860p pro...    31   1.4  
AE014298-2844|AAF48957.1|  890|Drosophila melanogaster CG12202-P...    31   1.4  
U18298-1|AAA57340.1|  875|Drosophila melanogaster CDC27Dm protein.     30   2.5  
BT025859-1|ABF85759.1|  446|Drosophila melanogaster IP15605p pro...    30   3.3  
BT023825-1|AAZ86746.1|  446|Drosophila melanogaster RE65127p pro...    30   3.3  
BT021947-1|AAX51652.1|  900|Drosophila melanogaster LD12661p pro...    30   3.3  
BT015292-1|AAT94521.1|  526|Drosophila melanogaster GH03334p pro...    30   3.3  
AY043266-1|AAK85704.1|  449|Drosophila melanogaster nocturin pro...    30   3.3  
AE014297-1253|AAF54601.2|  425|Drosophila melanogaster CG31299-P...    30   3.3  
AE014297-1252|AAF54600.2|  621|Drosophila melanogaster CG31299-P...    30   3.3  
AE014296-1216|AAF50592.1|  900|Drosophila melanogaster CG8610-PA...    30   3.3  
AY437926-1|AAR24077.1|  924|Drosophila melanogaster AMO protein.       29   7.6  
AY283154-1|AAQ18122.1|  924|Drosophila melanogaster polycystin-2...    29   7.6  
AE014134-2193|AAF53183.2|  924|Drosophila melanogaster CG6504-PA...    29   7.6  

>BT014631-1|AAT27255.1|  890|Drosophila melanogaster SD09860p
           protein.
          Length = 890

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
 Frame = +3

Query: 237 EKNYKDAQECCKNLLRKDKQNYF---GLVLLGKSFQDSDQACLAYQKAIACKPSHPLAWL 407
           +K Y +A +C +N L+ +K N      L LL    +D +            +PS   +W+
Sbjct: 94  DKKYDEAIKCYRNALKWEKDNLQILKDLSLLQIQMRDLEGYKETRHHLFTLRPSQHASWI 153

Query: 408 GLASYYEAHDDQIMNVKLLPVY 473
           G A  Y    D  M   +L  +
Sbjct: 154 GFAMSYHLLGDYDMANSILETF 175


>AE014298-2844|AAF48957.1|  890|Drosophila melanogaster CG12202-PA
           protein.
          Length = 890

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
 Frame = +3

Query: 237 EKNYKDAQECCKNLLRKDKQNYF---GLVLLGKSFQDSDQACLAYQKAIACKPSHPLAWL 407
           +K Y +A +C +N L+ +K N      L LL    +D +            +PS   +W+
Sbjct: 94  DKKYDEAIKCYRNALKWEKDNLQILKDLSLLQIQMRDLEGYKETRHHLFTLRPSQHASWI 153

Query: 408 GLASYYEAHDDQIMNVKLLPVY 473
           G A  Y    D  M   +L  +
Sbjct: 154 GFAMSYHLLGDYDMANSILETF 175


>U18298-1|AAA57340.1|  875|Drosophila melanogaster CDC27Dm protein.
          Length = 875

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 31/148 (20%), Positives = 60/148 (40%), Gaps = 4/148 (2%)
 Frame = +3

Query: 237  EKNYKDAQECCKNLLRKDKQNYFGLVLLGKSF---QDSDQACLAYQKAIACKPSHPLAWL 407
            +K ++ A +  K  ++ D    +   LLG      ++ D+A   ++ A+   P H  AW 
Sbjct: 658  QKEHETAIKFFKRAVQVDPDFVYSYTLLGHELVLTEEFDKAMDYFRAAVVRDPRHYNAWY 717

Query: 408  GLASYYEAHDDQIMNVKLLPV-YVEILKLQIEEEKALEIISKIGKLGVRYKNGDVVETLI 584
            G+ + Y   +      +L  + YV+ LK+  +      I+  IG +    K  D+    +
Sbjct: 718  GIGTIYSKQE----KYELAEIHYVKALKINPQNS---VILVHIGAMQFYMKKKDLSLQTL 770

Query: 585  NYLKEEPPTTLRKSAEEQLICLINENIP 668
            N      P     +   +L  L+   +P
Sbjct: 771  NTAATLDPKNPLHAIPSRLHLLLAGQVP 798


>BT025859-1|ABF85759.1|  446|Drosophila melanogaster IP15605p
           protein.
          Length = 446

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = +3

Query: 465 PVYVEILKLQIEEEKALEIISKIGKLGVRYKNGDVVETLINYLKEEPPTTLRKSAEEQLI 644
           P+Y  IL   +    +     K+ +  + + N DV E +   +K EPP T  K  EE   
Sbjct: 303 PIYATILGCDLLRLGSAYADVKLDREEILHPNADVGEFVAKSMKREPPYTTWKIREEGEE 362

Query: 645 C 647
           C
Sbjct: 363 C 363


>BT023825-1|AAZ86746.1|  446|Drosophila melanogaster RE65127p
           protein.
          Length = 446

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = +3

Query: 465 PVYVEILKLQIEEEKALEIISKIGKLGVRYKNGDVVETLINYLKEEPPTTLRKSAEEQLI 644
           P+Y  IL   +    +     K+ +  + + N DV E +   +K EPP T  K  EE   
Sbjct: 303 PIYATILGCDLLRLGSAYADVKLDREEILHPNADVGEFVAKSMKREPPYTTWKIREEGEE 362

Query: 645 C 647
           C
Sbjct: 363 C 363


>BT021947-1|AAX51652.1|  900|Drosophila melanogaster LD12661p protein.
          Length = 900

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 5/134 (3%)
 Frame = +3

Query: 237  EKNYKDAQECCKNLLRKDKQNYFGLVLLGKSF---QDSDQACLAYQKAIACKPSHPLAWL 407
            +K ++ A +  K  ++ D    +   LLG      ++ D+A   ++ A+   P H  AW 
Sbjct: 658  QKEHETAIKFFKRAVQVDPDFVYSYTLLGHELVLTEEFDKAMDYFRAAVVRDPRHYNAWY 717

Query: 408  GLASYYEAHDDQIMNVKLLPV-YVEILKLQIEEEKALEIISKIGKLGVRYKNGDV-VETL 581
            G+ + Y   +      +L  + YV+ LK+  +      I+  IG +    K  D+ ++TL
Sbjct: 718  GIGTIYSKQE----KYELAEIHYVKALKINPQNS---VILVHIGAMQFYMKKKDLSLQTL 770

Query: 582  INYLKEEPPTTLRK 623
                  +P   L +
Sbjct: 771  NTAATLDPKNPLTR 784


>BT015292-1|AAT94521.1|  526|Drosophila melanogaster GH03334p
           protein.
          Length = 526

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = +3

Query: 465 PVYVEILKLQIEEEKALEIISKIGKLGVRYKNGDVVETLINYLKEEPPTTLRKSAEEQLI 644
           P+Y  IL   +    +     K+ +  + + N DV E +   +K EPP T  K  EE   
Sbjct: 383 PIYATILGCDLLRLGSAYADVKLDREEILHPNADVGEFVAKSMKREPPYTTWKIREEGEE 442

Query: 645 C 647
           C
Sbjct: 443 C 443


>AY043266-1|AAK85704.1|  449|Drosophila melanogaster nocturin
           protein.
          Length = 449

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = +3

Query: 465 PVYVEILKLQIEEEKALEIISKIGKLGVRYKNGDVVETLINYLKEEPPTTLRKSAEEQLI 644
           P+Y  IL   +    +     K+ +  + + N DV E +   +K EPP T  K  EE   
Sbjct: 306 PIYATILGCDLLRLGSAYADVKLDREEILHPNADVGEFVAKSMKREPPYTTWKIREEGEE 365

Query: 645 C 647
           C
Sbjct: 366 C 366


>AE014297-1253|AAF54601.2|  425|Drosophila melanogaster CG31299-PB,
           isoform B protein.
          Length = 425

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = +3

Query: 465 PVYVEILKLQIEEEKALEIISKIGKLGVRYKNGDVVETLINYLKEEPPTTLRKSAEEQLI 644
           P+Y  IL   +    +     K+ +  + + N DV E +   +K EPP T  K  EE   
Sbjct: 282 PIYATILGCDLLRLGSAYADVKLDREEILHPNADVGEFVAKSMKREPPYTTWKIREEGEE 341

Query: 645 C 647
           C
Sbjct: 342 C 342


>AE014297-1252|AAF54600.2|  621|Drosophila melanogaster CG31299-PA,
           isoform A protein.
          Length = 621

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = +3

Query: 465 PVYVEILKLQIEEEKALEIISKIGKLGVRYKNGDVVETLINYLKEEPPTTLRKSAEEQLI 644
           P+Y  IL   +    +     K+ +  + + N DV E +   +K EPP T  K  EE   
Sbjct: 478 PIYATILGCDLLRLGSAYADVKLDREEILHPNADVGEFVAKSMKREPPYTTWKIREEGEE 537

Query: 645 C 647
           C
Sbjct: 538 C 538


>AE014296-1216|AAF50592.1|  900|Drosophila melanogaster CG8610-PA
            protein.
          Length = 900

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 5/134 (3%)
 Frame = +3

Query: 237  EKNYKDAQECCKNLLRKDKQNYFGLVLLGKSF---QDSDQACLAYQKAIACKPSHPLAWL 407
            +K ++ A +  K  ++ D    +   LLG      ++ D+A   ++ A+   P H  AW 
Sbjct: 658  QKEHETAIKFFKRAVQVDPDFVYSYTLLGHELVLTEEFDKAMDYFRAAVVRDPRHYNAWY 717

Query: 408  GLASYYEAHDDQIMNVKLLPV-YVEILKLQIEEEKALEIISKIGKLGVRYKNGDV-VETL 581
            G+ + Y   +      +L  + YV+ LK+  +      I+  IG +    K  D+ ++TL
Sbjct: 718  GIGTIYSKQE----KYELAEIHYVKALKINPQNS---VILVHIGAMQFYMKKKDLSLQTL 770

Query: 582  INYLKEEPPTTLRK 623
                  +P   L +
Sbjct: 771  NTAATLDPKNPLTR 784


>AY437926-1|AAR24077.1|  924|Drosophila melanogaster AMO protein.
          Length = 924

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
 Frame = -3

Query: 299 VLFIFSKEVFTALL--SIFVIFFINMLPCLLQQLFNISHFLRMLFNNI*FKLYFRRDSLA 126
           +L+   +EV  AL+  S+F+IF I  L  L+  + ++ H     FN+   KL+  R+ + 
Sbjct: 226 ILYTTDEEVREALVEFSVFIIFLI--LTSLV--VLSVRHTYMFYFNDTMKKLFTNREMVV 281

Query: 125 SPS 117
           +PS
Sbjct: 282 APS 284


>AY283154-1|AAQ18122.1|  924|Drosophila melanogaster polycystin-2
           protein.
          Length = 924

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
 Frame = -3

Query: 299 VLFIFSKEVFTALL--SIFVIFFINMLPCLLQQLFNISHFLRMLFNNI*FKLYFRRDSLA 126
           +L+   +EV  AL+  S+F+IF I  L  L+  + ++ H     FN+   KL+  R+ + 
Sbjct: 226 ILYTTDEEVREALVEFSVFIIFLI--LTSLV--VLSVRHTYMFYFNDTMKKLFTNREMVV 281

Query: 125 SPS 117
           +PS
Sbjct: 282 APS 284


>AE014134-2193|AAF53183.2|  924|Drosophila melanogaster CG6504-PA
           protein.
          Length = 924

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
 Frame = -3

Query: 299 VLFIFSKEVFTALL--SIFVIFFINMLPCLLQQLFNISHFLRMLFNNI*FKLYFRRDSLA 126
           +L+   +EV  AL+  S+F+IF I  L  L+  + ++ H     FN+   KL+  R+ + 
Sbjct: 226 ILYTTDEEVREALVEFSVFIIFLI--LTSLV--VLSVRHTYMFYFNDTMKKLFTNREMVV 281

Query: 125 SPS 117
           +PS
Sbjct: 282 APS 284


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,977,034
Number of Sequences: 53049
Number of extensions: 446381
Number of successful extensions: 1189
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)