Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5b22
         (507 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   2.7  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   4.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.4  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   8.4  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -1

Query: 276 CSYNRTCRIDL*SRRHLQ 223
           C Y   C ID+  RR  Q
Sbjct: 224 CKYGNNCEIDMYMRRKCQ 241


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 288 NYRQTACPEDKSMLTVS 338
           N   T CPE K+ +TV+
Sbjct: 121 NENTTNCPEQKNTVTVT 137


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +3

Query: 204  ICGISHAGDVVGFRDLCDMFDYNCIRRRNYRQ 299
            IC + H   +V F D    FD    +  NY++
Sbjct: 1174 ICSLIHRKKIVKFLDGIMAFDIQLKQVVNYKK 1205


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 69  LCFMILTVNSHGPPQERDNEDI 134
           +CF ++ +  H   QER  E+I
Sbjct: 5   ICFALMCIACHPDIQERIFEEI 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,800
Number of Sequences: 336
Number of extensions: 2229
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)