Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5b19
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    25   0.57 
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   5.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.3  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   7.0  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = +2

Query: 95  FVHLSKQKQTQDKMCDRKAVIKNADXSEEMQQD--AVDCATQALEKFNIEXDIA-AFXKK 265
           F+ + KQK  +D   D+KA+ K     E+ ++D  +V   T  +E    + D +    + 
Sbjct: 68  FIKMVKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTLTIENLLADYDFSETLTRA 127

Query: 266 EFDKKYN 286
           +F++  N
Sbjct: 128 KFEELNN 134


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 622 NRKFTMLDINCVLPLHLI 675
           N KFT LD++  L  HL+
Sbjct: 37  NGKFTALDVDPTLCTHLL 54


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 299 CIVGRNFGSYVTHETRHFIYFYLGQ 373
           C+ G     + TH T H  Y Y G+
Sbjct: 70  CLNGATCQDHTTHYTCHCPYGYTGK 94


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 616 LFNRKFTMLDINCVLPLHLI 675
           L N KFT+ DI+  L  HLI
Sbjct: 34  LNNGKFTVEDIDPTLCTHLI 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,474
Number of Sequences: 336
Number of extensions: 2708
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)