Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5b18
(451 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 23 1.8
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.8
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.8
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.8
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.8
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.8
AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory recept... 21 7.1
AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory recept... 21 7.1
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 20 9.4
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 20 9.4
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 20 9.4
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 20 9.4
AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory recept... 20 9.4
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 22.6 bits (46), Expect = 1.8
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -3
Query: 176 NIYHWHFSN*LLFP 135
N++HWH ++ FP
Sbjct: 270 NVFHWHLTDSQSFP 283
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 22.6 bits (46), Expect = 1.8
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -2
Query: 378 YYKFISLFCA*CIHRTYLLGFCFQNSFTERQTQPVFLFFSCTLFCN 241
YY F + I LLGF E+ T V + S T+F N
Sbjct: 213 YYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLN 258
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.6 bits (46), Expect = 1.8
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -2
Query: 378 YYKFISLFCA*CIHRTYLLGFCFQNSFTERQTQPVFLFFSCTLFCN 241
YY F + I LLGF E+ T V + S T+F N
Sbjct: 213 YYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLN 258
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.6 bits (46), Expect = 1.8
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -2
Query: 378 YYKFISLFCA*CIHRTYLLGFCFQNSFTERQTQPVFLFFSCTLFCN 241
YY F + I LLGF E+ T V + S T+F N
Sbjct: 213 YYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLN 258
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.6 bits (46), Expect = 1.8
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -2
Query: 378 YYKFISLFCA*CIHRTYLLGFCFQNSFTERQTQPVFLFFSCTLFCN 241
YY F + I LLGF E+ T V + S T+F N
Sbjct: 213 YYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLN 258
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.6 bits (46), Expect = 1.8
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -2
Query: 378 YYKFISLFCA*CIHRTYLLGFCFQNSFTERQTQPVFLFFSCTLFCN 241
YY F + I LLGF E+ T V + S T+F N
Sbjct: 213 YYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLN 258
>AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory receptor
candidate 38 protein.
Length = 436
Score = 20.6 bits (41), Expect = 7.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 312 NKTLEDKFGGYIMHRRVK*IY 374
NK+ DKFG ++ +K IY
Sbjct: 48 NKSSTDKFGNGAIYEVLKPIY 68
>AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory receptor
candidate 31 protein.
Length = 250
Score = 20.6 bits (41), Expect = 7.1
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = -3
Query: 203 FILFVTFSTNIY 168
+I+ V+F+TN+Y
Sbjct: 164 YIIIVSFATNLY 175
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 20.2 bits (40), Expect = 9.4
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +1
Query: 277 WLCLTLGKRILETKP*KISSVDTSCTEE*NKF 372
WLC L +R + S T C E N+F
Sbjct: 582 WLCTLLLQRGYRVEYSAASDAFTHCPEGFNEF 613
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 20.2 bits (40), Expect = 9.4
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +1
Query: 277 WLCLTLGKRILETKP*KISSVDTSCTEE*NKF 372
WLC L +R + S T C E N+F
Sbjct: 815 WLCTLLLQRGYRVEYSAASDAFTHCPEGFNEF 846
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 20.2 bits (40), Expect = 9.4
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +1
Query: 277 WLCLTLGKRILETKP*KISSVDTSCTEE*NKF 372
WLC L +R + S T C E N+F
Sbjct: 815 WLCTLLLQRGYRVEYSAASDAFTHCPEGFNEF 846
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 20.2 bits (40), Expect = 9.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3
Query: 225 RCRECGYRIMYKKRTKRLVVF 287
+C+E I YK+ KRL+ +
Sbjct: 116 KCQENSTVIDYKRHKKRLLCY 136
>AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory receptor
candidate 3 protein.
Length = 398
Score = 20.2 bits (40), Expect = 9.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3
Query: 225 RCRECGYRIMYKKRTKRLVVF 287
+C+E I YK+ KRL+ +
Sbjct: 134 KCQENSTVIDYKRHKKRLLCY 154
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,502
Number of Sequences: 336
Number of extensions: 2159
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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