Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5b18
         (451 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione S-tran...    25   1.6  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    23   5.0  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   6.6  
AF316636-1|AAG45164.1|  221|Anopheles gambiae glutathione S-tran...    23   6.6  

>AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione
           S-transferase u1 protein.
          Length = 233

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 172 YIIGTLVTDCSFPVVSAIMC 113
           Y  G+ +T   FP+VS++MC
Sbjct: 148 YAAGSGLTIADFPLVSSVMC 167


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 426 SVLLEHRQSNKNTH 385
           ++LL HR  N+NTH
Sbjct: 155 ALLLRHRHVNENTH 168


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = -2

Query: 378 YYKFISLFCA*CIHRTYLLGFCFQNSFTERQTQPVFLFFSCTLFCN 241
           YY F  +     I    LLGF       E+ T  V +  S T+F N
Sbjct: 233 YYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLN 278


>AF316636-1|AAG45164.1|  221|Anopheles gambiae glutathione
           S-transferase E2 protein.
          Length = 221

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +3

Query: 165 MIYVCGECHKENEIKPRDPIR 227
           MIY+  +  K++ + P+DP++
Sbjct: 72  MIYLVTKYGKDDSLYPKDPVK 92


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 422,638
Number of Sequences: 2352
Number of extensions: 8213
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)