Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5b18
         (451 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82266-7|CAB51465.1|   62|Caenorhabditis elegans Hypothetical pr...    87   4e-18
Z77663-14|CAB01214.2|  568|Caenorhabditis elegans Hypothetical p...    29   1.2  
AJ581300-1|CAE46113.1|  568|Caenorhabditis elegans flavin monoox...    29   1.2  
Z77662-5|CAB01192.2|  579|Caenorhabditis elegans Hypothetical pr...    28   2.7  
AF106589-2|AAC78230.1|  107|Caenorhabditis elegans Hypothetical ...    27   4.8  

>Z82266-7|CAB51465.1|   62|Caenorhabditis elegans Hypothetical
           protein F23B2.13 protein.
          Length = 62

 Score = 87.4 bits (207), Expect = 4e-18
 Identities = 34/44 (77%), Positives = 41/44 (93%)
 Frame = +3

Query: 165 MIYVCGECHKENEIKPRDPIRCRECGYRIMYKKRTKRLVVFDAR 296
           MIY+CGECH ENEIKP+D IRCRECGYRI+YKKR ++L+V+DAR
Sbjct: 19  MIYICGECHAENEIKPKDAIRCRECGYRILYKKRCRKLMVYDAR 62


>Z77663-14|CAB01214.2|  568|Caenorhabditis elegans Hypothetical
           protein F53F4.5 protein.
          Length = 568

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -3

Query: 272 FCSFLVHYSVTTFSAPNRISWFDFILFVTFSTNIYHW 162
           FCS L+ Y  TT + P  + +F F LF T       W
Sbjct: 521 FCSGLLLYCSTTSTLPPAVYFFSFFLFFTLYGATLMW 557


>AJ581300-1|CAE46113.1|  568|Caenorhabditis elegans flavin
           monooxygenase protein.
          Length = 568

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -3

Query: 272 FCSFLVHYSVTTFSAPNRISWFDFILFVTFSTNIYHW 162
           FCS L+ Y  TT + P  + +F F LF T       W
Sbjct: 521 FCSGLLLYCSTTSTLPPAVYFFSFFLFFTLYGATLMW 557


>Z77662-5|CAB01192.2|  579|Caenorhabditis elegans Hypothetical
           protein F47B8.5 protein.
          Length = 579

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 236 FSAPNRISWFDFILFVTFSTNIYHWH 159
           F A    S F F  F+TFST+ +H+H
Sbjct: 310 FEAICLFSLFSFFNFITFSTSHFHFH 335


>AF106589-2|AAC78230.1|  107|Caenorhabditis elegans Hypothetical
           protein Y44E3A.3 protein.
          Length = 107

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -2

Query: 312 FQNSFTERQTQPVFLFFSCT 253
           F+  F E++TQPV LFF+ +
Sbjct: 11  FKTIFAEKKTQPVILFFTAS 30


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,491,203
Number of Sequences: 27780
Number of extensions: 182486
Number of successful extensions: 404
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 403
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)