Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5b11
         (736 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    27   0.12 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   1.9  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   2.6  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   5.9  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    22   5.9  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   7.8  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = -1

Query: 553 FFYSIKVTEIFQITISSS*CSKSDDFTDNXGALSITEVIWQTAHSSGYFDEFFYCTVHRS 374
           FFY +   E     + ++     DDF D  G   +  + + T H   Y D+ F+    +S
Sbjct: 175 FFYLVSKIESLACELKNT----VDDFNDIFGISFLLIISYSTLHFVNYIDDLFFFRFEKS 230



 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 585 FINHPDXLFFFSF 547
           F+N+ D LFFF F
Sbjct: 215 FVNYIDDLFFFRF 227


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -1

Query: 454 SITEVIWQTAHSSGYFDEFFYC 389
           S+   +W     S +F +FF+C
Sbjct: 404 SVNAGMWMWLSCSSFFQQFFHC 425


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 303 DRVRDKIAEXTMALDXPFSIRF 368
           D ++DK      A+  PF +RF
Sbjct: 468 DDMKDKFRRWVSAMSRPFEVRF 489


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 545 FHKSNGNFSNNYF 507
           +H +NGN SNN++
Sbjct: 376 WHNNNGNNSNNHW 388


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -3

Query: 158 LLLLRKYSSFFLPHCVMXVXYSSVIVFRSFCCLNLR 51
           L  +RKY S F+   V       V VFR    L ++
Sbjct: 84  LKFIRKYGSHFIESYVTGNALYQVFVFRRSIYLQIK 119


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 170 KTPSNEKKDGLETPKDE 220
           KT  +  K+GLE P+DE
Sbjct: 528 KTLVSVTKEGLELPEDE 544


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,054
Number of Sequences: 336
Number of extensions: 3091
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)