Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5b03
         (731 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    25   0.63 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.63 
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.4  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.4  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   7.8  

>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 13/56 (23%), Positives = 25/56 (44%)
 Frame = +3

Query: 561 TICTKPSNVNNAPSGPYPLKYVLNTDPDEGPTANAKYSVEAKFNDYHFDYTSSQSS 728
           T C+K S      S  + ++Y+++  PD      AKY  +  +   +F+    + S
Sbjct: 75  TDCSKCSEKQKEGSD-FIMRYLIDNKPDYWKALEAKYDPDGTYKKRYFESQKDEVS 129


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 2/84 (2%)
 Frame = +3

Query: 144 NKMACCCKPGKSNKSSTSCLGRCDLPKHRCLERREVKPGPV--PKHMGWLYTAKNSPEHQ 317
           N   C CKPG +  +  + +  CD     CL     +        H  + YT K+  E+ 
Sbjct: 43  NSYICTCKPGFTGSNCQNRINLCD--SSPCLNGATCQDHTTHYTCHCPYGYTGKDCGEYV 100

Query: 318 LRCGWRPGHVSCSVLRKIEQHNSM 389
             C   P     + ++   Q+  +
Sbjct: 101 DWCSTNPCENQATCVQNKNQYQCL 124


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 10/42 (23%)
 Frame = -1

Query: 602 RRSVVDIGRFCTY----------CILSFVPYYSKDRLCSRRL 507
           ++S+VD+G F  Y          CI  F P Y  ++  +RRL
Sbjct: 207 KQSIVDMGEFLLYRLLRCWLISKCIYVFNPRYYLEKKVTRRL 248


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 10/42 (23%)
 Frame = -1

Query: 602 RRSVVDIGRFCTY----------CILSFVPYYSKDRLCSRRL 507
           ++S+VD+G F  Y          CI  F P Y  ++  +RRL
Sbjct: 207 KQSIVDMGEFLLYRLLRCWLISKCIYVFNPRYYLEKKVTRRL 248


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 728 GRLGASVIKMVIIEFSLY 675
           GRLGAS + +VI  FS +
Sbjct: 212 GRLGASYVFVVIDVFSKF 229


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,783
Number of Sequences: 336
Number of extensions: 4321
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)