Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5b03
(731 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132876-3|CAD21657.2| 746|Caenorhabditis elegans Hypothetical ... 34 0.090
AL117202-13|CAB55075.1| 580|Caenorhabditis elegans Hypothetical... 31 0.84
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z83241-2|CAB05816.2| 435|Caenorhabditis elegans Hypothetical pr... 28 5.9
U97005-12|AAB52289.1| 1121|Caenorhabditis elegans Hypothetical p... 28 5.9
U97009-7|AAM45361.1| 133|Caenorhabditis elegans Hypothetical pr... 28 7.8
U42439-5|AAA83509.2| 542|Caenorhabditis elegans Hypothetical pr... 28 7.8
L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical pr... 28 7.8
AL021480-3|CAA16328.1| 410|Caenorhabditis elegans Hypothetical ... 28 7.8
AL021480-2|CAA16327.1| 391|Caenorhabditis elegans Hypothetical ... 28 7.8
>AL132876-3|CAD21657.2| 746|Caenorhabditis elegans Hypothetical
protein Y105E8A.3 protein.
Length = 746
Score = 34.3 bits (75), Expect = 0.090
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2
Query: 499 HDGEDGHRARHFGGMQHGFEHKGREQLEGQGVQLPILIELCCSIF 365
H G H H GG HG H G QGV L +L + S+F
Sbjct: 532 HGGGSSHGHSHGGGGSHGHSHGGGGNANMQGVFLHVLADTLGSVF 576
>AL117202-13|CAB55075.1| 580|Caenorhabditis elegans Hypothetical
protein Y47D3A.16 protein.
Length = 580
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 561 TICTKPSNVNNAPSGPYPL-KYVLNTDPDEGPTANAKYS 674
T T+PSNV ++ S P PL K V+ T NA+YS
Sbjct: 527 TTTTRPSNVGSSASTPIPLPKRVIKLPHTHTSTQNAQYS 565
>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical protein
C01B9.1b protein.
Length = 1671
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 282 NPCVWAQVQVLLRVSLNICALVDHTVLNSLLMIYSIFRVYSS 157
N C + V+VL VS +I VD NS+ Y I SS
Sbjct: 1333 NDCAFVSVEVLRNVSKDIRQFVDRNRRNSIFQTYDISLSLSS 1374
>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical protein
C01B9.1a protein.
Length = 1601
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 282 NPCVWAQVQVLLRVSLNICALVDHTVLNSLLMIYSIFRVYSS 157
N C + V+VL VS +I VD NS+ Y I SS
Sbjct: 1263 NDCAFVSVEVLRNVSKDIRQFVDRNRRNSIFQTYDISLSLSS 1304
>Z83241-2|CAB05816.2| 435|Caenorhabditis elegans Hypothetical
protein T25C8.1 protein.
Length = 435
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 248 SKTWTCAQTHGLVVYGQK 301
S WTC Q HG+V++ Q+
Sbjct: 73 SNIWTCGQMHGIVMWKQR 90
>U97005-12|AAB52289.1| 1121|Caenorhabditis elegans Hypothetical
protein F19F10.11a protein.
Length = 1121
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +3
Query: 165 KPGKSNKS--STSCLGRCDLPKHRCLERREVKP 257
KP K K STSC+ +C PKH L +RE P
Sbjct: 871 KPAKPVKVPVSTSCV-QCGTPKHEGLRKRECVP 902
>U97009-7|AAM45361.1| 133|Caenorhabditis elegans Hypothetical
protein T19H12.3 protein.
Length = 133
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Frame = -2
Query: 694 SLNLASTLYF-----AFAVGPSSGSVFRTYFSGYGPDG 596
++N+ STLY+ AF P S + RTYF + P+G
Sbjct: 21 NVNVPSTLYYKVNDTAFIGLPVSANYRRTYFKAFEPEG 58
>U42439-5|AAA83509.2| 542|Caenorhabditis elegans Hypothetical
protein F19C7.4 protein.
Length = 542
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 612 PLKYVLNTDPDEGPTANAKYSV 677
P + +L DP EGPT +AKY +
Sbjct: 28 PREGLLTGDPAEGPTTDAKYMI 49
>L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical
protein F54F2.1 protein.
Length = 1226
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -2
Query: 505 LQHDGEDGHRARHFGGMQHGFEHKGREQLEGQG 407
+Q+ GED + + + + GFE+ G E + G G
Sbjct: 682 VQNGGEDSYETKLYFDVPQGFEYGGIESVGGDG 714
>AL021480-3|CAA16328.1| 410|Caenorhabditis elegans Hypothetical
protein Y39E4A.2b protein.
Length = 410
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -2
Query: 520 VAAGCLQHDGEDGHRARHFGGMQHGFEHKGR 428
+ G + H G GH H G HG H G+
Sbjct: 221 IVMGLVLHFGTGGHGHTHGGHSSHGHAHDGK 251
>AL021480-2|CAA16327.1| 391|Caenorhabditis elegans Hypothetical
protein Y39E4A.2a protein.
Length = 391
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = -2
Query: 520 VAAGCLQHDGEDGHRARHFGGMQHGFEHKGR 428
+ G + H G GH H G HG H G+
Sbjct: 202 IVMGLVLHFGTGGHGHTHGGHSSHGHAHDGK 232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,712,486
Number of Sequences: 27780
Number of extensions: 407989
Number of successful extensions: 1202
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1200
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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