Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5a24
         (358 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   0.94 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   0.94 
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   2.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   2.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   2.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.0  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        20   6.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    20   8.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    20   8.7  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 0.94
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
 Frame = -1

Query: 253 TVSINAQCNKASPRWHLFLGGMTIIIPVCVQLRLSIVCCG--SGLRSNFVRFRNIFETSL 80
           T+   A     +  + LF+  MT+I+P  + L + +  C   + LR  +       ET +
Sbjct: 161 TIIFFASYQYGTKTYSLFIVFMTVILPYFINLLMELQYCHYLNILRVRYQLLNEYLETLV 220

Query: 79  LI*NR*TSLNRYREI 35
              NR TS+  + ++
Sbjct: 221 QETNR-TSVEGWTDV 234


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.0 bits (47), Expect = 0.94
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
 Frame = -1

Query: 253 TVSINAQCNKASPRWHLFLGGMTIIIPVCVQLRLSIVCCG--SGLRSNFVRFRNIFETSL 80
           T+   A     +  + LF+  MT+I+P  + L + +  C   + LR  +       ET +
Sbjct: 161 TIIFFASYQYGTKTYSLFIVFMTVILPYFINLLMELQYCHYLNILRVRYQLLNEYLETLV 220

Query: 79  LI*NR*TSLNRYREI 35
              NR TS+  + ++
Sbjct: 221 QETNR-TSVEGWTDV 234


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 346 EINYLFVIHLPMYSRRHTFIWL 281
           + N +  + L   + +HTFIW+
Sbjct: 207 DYNIVMALVLQFITLQHTFIWV 228


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 346 EINYLFVIHLPMYSRRHTFIWL 281
           + N +  + L   + +HTFIW+
Sbjct: 207 DYNIVMALVLQFITLQHTFIWV 228


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 346 EINYLFVIHLPMYSRRHTFIWL 281
           + N +  + L   + +HTFIW+
Sbjct: 207 DYNIVMALVLQFITLQHTFIWV 228


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = +3

Query: 252 VWLTPMAYFMSQIKVWRR 305
           +WL   AY + ++  W R
Sbjct: 122 IWLLIFAYLIPEVGTWIR 139


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = +3

Query: 252 VWLTPMAYFMSQIKVWRR 305
           +WL   AY + ++  W R
Sbjct: 122 IWLLIFAYLIPEVGTWIR 139


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 305 SSPHLYLAHEVSHWSQPN 252
           +SP+L L H ++H   P+
Sbjct: 332 TSPNLPLTHNIAHNPYPS 349


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 199 LGGMTIIIPVCVQLRLSI 146
           LGG+T  I + +QL  S+
Sbjct: 639 LGGVTTYIIILIQLATSL 656


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 199 LGGMTIIIPVCVQLRLSI 146
           LGG+T  I + +QL  S+
Sbjct: 364 LGGVTTYIIILIQLATSL 381


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,976
Number of Sequences: 336
Number of extensions: 1748
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)