Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5a20
         (536 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0216 - 15727044-15727124,15728557-15728607,15728695-157287...   115   3e-26
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275...    30   1.3  
06_01_1193 + 10264360-10264504,10264763-10264910,10268350-102687...    27   7.2  
12_02_0058 + 13015401-13016654                                         27   9.5  
04_03_0776 - 19463473-19464252,19464354-19464849,19465460-19465911     27   9.5  

>09_04_0216 -
           15727044-15727124,15728557-15728607,15728695-15728752,
           15729336-15729398,15729740-15729804,15729901-15730038
          Length = 151

 Score =  115 bits (276), Expect = 3e-26
 Identities = 53/106 (50%), Positives = 74/106 (69%)
 Frame = +1

Query: 184 LGDFLLQLENYNPSIPDSVVAYYLNLTGFESQDPRLVRLIALASQKFLSDIVNDALQHCK 363
           L +FL  L +Y P+IPD +V +YL  +GF   D RL RL+A+A+QKF+SDI +D+LQHCK
Sbjct: 33  LTEFLSSLMDYTPTIPDELVEHYLGRSGFYCPDLRLTRLVAVATQKFISDIASDSLQHCK 92

Query: 364 MRTSNQINQSSKNQKGPKEKKYVMTMDDLAPALQEYGITAKKPHYF 501
            R +  I  +   Q  PK+++ V+TMDDL+ ALQE+G+  K P YF
Sbjct: 93  ARVAAPIKDNKSKQ--PKDRRLVLTMDDLSKALQEHGVNLKHPEYF 136


>07_03_1691 -
           28726307-28726323,28726588-28726953,28727483-28727567,
           28728255-28728387,28729793-28730328
          Length = 378

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
 Frame = +1

Query: 205 LENYNPSIPDSVVAYYLNLTGFESQDPRL-VRLIALASQKFLSDIVNDAL----QHCKMR 369
           L+    ++   +  +  + TG  +++  L +RL A+  Q  L D +NDAL    +  K+ 
Sbjct: 208 LQTEATTLSAQLTLFQRDTTGLSAENAELKIRLQAMEQQAQLRDALNDALKQEVERLKIA 267

Query: 370 TSNQINQSSKNQKGPKEKKYVMTMDDLAP--ALQEYGITAKKPHYF 501
           T      +     G ++  Y  +   L+   A+Q +    + PH F
Sbjct: 268 TGEMAKSNDAYNTGMQQVPYSPSFFQLSDQHAVQHHAGVQQLPHQF 313


>06_01_1193 +
           10264360-10264504,10264763-10264910,10268350-10268748,
           10268925-10271214
          Length = 993

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +1

Query: 259 LTGFESQDPRLVRLIALASQKFLSDIVNDALQHCKMRTSNQI-NQSSKNQKGPKEKKYVM 435
           L GF     R+  L  +  Q   S+ ++  LQ  + +   QI + S   +K  KEK+Y +
Sbjct: 222 LVGFSDSKIRIELLKDMIRQFLGSNSLDQVLQELQGKMVVQIPHLSDYLRKKLKEKRYFV 281

Query: 436 TMDDL 450
            +DDL
Sbjct: 282 VLDDL 286


>12_02_0058 + 13015401-13016654
          Length = 417

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +1

Query: 190 DFLLQLE-NYNPSIPDSVVAYYL 255
           DFLL+L   +NPS P+ VV YYL
Sbjct: 7   DFLLELGFRFNPS-PEQVVTYYL 28


>04_03_0776 - 19463473-19464252,19464354-19464849,19465460-19465911
          Length = 575

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/45 (22%), Positives = 22/45 (48%)
 Frame = +1

Query: 283 PRLVRLIALASQKFLSDIVNDALQHCKMRTSNQINQSSKNQKGPK 417
           PR   L+ ++ + F +D +     HCK+     + ++    +GP+
Sbjct: 125 PRFRALVLISCEGFSTDGLAAVASHCKLLRELDLQENEVEDRGPR 169


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,590,375
Number of Sequences: 37544
Number of extensions: 243985
Number of successful extensions: 674
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)