Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5a15
         (716 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7PDQ5 Cluster: ERYTHROCYTE MEMBRANE PROTEIN PFEMP3; n=...    33   7.0  
UniRef50_Q4YYL6 Cluster: Putative uncharacterized protein; n=5; ...    33   7.0  
UniRef50_Q4AI14 Cluster: Glycosyl transferase, family 2; n=3; Ch...    33   9.3  

>UniRef50_Q7PDQ5 Cluster: ERYTHROCYTE MEMBRANE PROTEIN PFEMP3; n=1;
           Plasmodium yoelii yoelii|Rep: ERYTHROCYTE MEMBRANE
           PROTEIN PFEMP3 - Plasmodium yoelii yoelii
          Length = 1137

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +1

Query: 328 SINVWKTWSSDNEDHHVVCYGKKIHYHKFMTLNNESITQYKHLETMDER 474
           +INV K   +++ D   VCY    + +KF T  N+ I+Q     T D++
Sbjct: 197 NINVNKQKKNESNDDSSVCYNNIYNINKFTTDENDDISQKSDSNTYDKK 245


>UniRef50_Q4YYL6 Cluster: Putative uncharacterized protein; n=5;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium berghei
          Length = 591

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
 Frame = +1

Query: 280 KYYCFQSYLKQH---SEFRSINVWKTWSSDNEDHHVVCYGKKIHYHKFMTL-NNESI 438
           KY C + YLK++   SEF S+ V   + +D  +      G +++Y+KF+ L  NE I
Sbjct: 215 KYTCGKGYLKRYLGESEFHSLKVPIYFINDRIEDDNTSSGNEVNYNKFLELIKNEHI 271


>UniRef50_Q4AI14 Cluster: Glycosyl transferase, family 2; n=3;
           Chlorobium/Pelodictyon group|Rep: Glycosyl transferase,
           family 2 - Chlorobium phaeobacteroides BS1
          Length = 241

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +2

Query: 377 LYAMVKKYTTINL*HLIMKVLHNTNIWKQWMKGKK 481
           L+  +K YT  N  HLI K+ H + +W +  KGKK
Sbjct: 160 LHNPIKHYTFDNASHLIKKMEHYSTLWAEDHKGKK 194


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,053,185
Number of Sequences: 1657284
Number of extensions: 11834915
Number of successful extensions: 25639
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25634
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)