Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5a14
(405 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003385-1|AAB54243.1| 884|Caenorhabditis elegans Hypothetical ... 29 1.3
Z81046-5|CAB02823.1| 225|Caenorhabditis elegans Hypothetical pr... 28 2.2
U39741-2|AAQ81278.1| 279|Caenorhabditis elegans Hypothetical pr... 28 2.2
U39741-1|AAA80429.2| 301|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z83216-3|CAB05674.2| 232|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z81587-10|CAH10780.1| 483|Caenorhabditis elegans Hypothetical p... 27 6.8
Z81587-9|CAB04708.2| 511|Caenorhabditis elegans Hypothetical pr... 27 6.8
AF039042-11|AAC48251.1| 343|Caenorhabditis elegans Serpentine r... 27 6.8
Z81523-4|CAB04243.1| 824|Caenorhabditis elegans Hypothetical pr... 26 9.0
AY340594-1|AAQ17186.1| 824|Caenorhabditis elegans SPD-2 protein. 26 9.0
>AF003385-1|AAB54243.1| 884|Caenorhabditis elegans Hypothetical
protein R08F11.1 protein.
Length = 884
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = +2
Query: 59 YLLVVCFVSR*FVNNL*CIVLS*YRTISRIVSFNFLYPVNSSRASERTHTLFIFSNIPCL 238
Y L + + +NN+ C++ + + IS + +L+ + + SE +H + +FS +
Sbjct: 793 YALSAMMIEKVDLNNIFCLLCNNFGKISMKLKLLYLFVAITIKFSEFSHKIRVFSGKKLV 852
Query: 239 SRVSE 253
S SE
Sbjct: 853 SSKSE 857
>Z81046-5|CAB02823.1| 225|Caenorhabditis elegans Hypothetical
protein C37E2.2a protein.
Length = 225
Score = 28.3 bits (60), Expect = 2.2
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Frame = +2
Query: 2 SPPQSLVLIARFSHYCIFIYLLVVCFVSR*FVNNL*CIVLS*YRTISRIVSF--NFLYPV 175
+PP+++ + FS +F+Y +++C+V R F +LS + ++S+ FL
Sbjct: 135 TPPKTIASLI-FSAALVFVYFMIICYV-RFFDGYWLYPILSLFAFEHFVISYIIGFLGFF 192
Query: 176 NSSRASERTHTLF-----IFSNIPCLSRVSEKKKF 265
+A+ R + LF I S +P S +++KKKF
Sbjct: 193 MLIKAAVRLNKLFHQKDDIGSKLP--SNMNKKKKF 225
>U39741-2|AAQ81278.1| 279|Caenorhabditis elegans Hypothetical
protein F12D9.1b protein.
Length = 279
Score = 28.3 bits (60), Expect = 2.2
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 36 SLIIVFSYIC*SFVLCLVNLLIICSV 113
+L +YIC S +LC+ L+++C V
Sbjct: 205 TLFSSITYICGSIILCIAVLMVVCVV 230
>U39741-1|AAA80429.2| 301|Caenorhabditis elegans Hypothetical
protein F12D9.1a protein.
Length = 301
Score = 28.3 bits (60), Expect = 2.2
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 36 SLIIVFSYIC*SFVLCLVNLLIICSV 113
+L +YIC S +LC+ L+++C V
Sbjct: 227 TLFSSITYICGSIILCIAVLMVVCVV 252
>Z83216-3|CAB05674.2| 232|Caenorhabditis elegans Hypothetical
protein C08F11.3 protein.
Length = 232
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 60 IC*SFVLCLVNLLIICSVSCCRNIELFLVLFRLIFYIQ*T 179
IC + L ++ + + +C NI FL++F L+F ++ T
Sbjct: 146 ICFVWTLIIITIRNLVEWTCDSNIFTFLIIFYLVFILRFT 185
>Z81587-10|CAH10780.1| 483|Caenorhabditis elegans Hypothetical
protein T06G6.3b protein.
Length = 483
Score = 26.6 bits (56), Expect = 6.8
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = -1
Query: 276 SQRLNFFFSLTRDKQGILEKIKSVCVRSDARLEFTGYKKLNETIREIVLYYDNTIHY 106
+ +LN+ ++ + Q ++K++ + +++ LE K + TIRE L +N Y
Sbjct: 353 TNQLNYQSAILNEAQSEIKKLEQLILKNSEELESLQTWKSDSTIREQNLMDENCKQY 409
>Z81587-9|CAB04708.2| 511|Caenorhabditis elegans Hypothetical
protein T06G6.3a protein.
Length = 511
Score = 26.6 bits (56), Expect = 6.8
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = -1
Query: 276 SQRLNFFFSLTRDKQGILEKIKSVCVRSDARLEFTGYKKLNETIREIVLYYDNTIHY 106
+ +LN+ ++ + Q ++K++ + +++ LE K + TIRE L +N Y
Sbjct: 381 TNQLNYQSAILNEAQSEIKKLEQLILKNSEELESLQTWKSDSTIREQNLMDENCKQY 437
>AF039042-11|AAC48251.1| 343|Caenorhabditis elegans Serpentine
receptor, class h protein199 protein.
Length = 343
Score = 26.6 bits (56), Expect = 6.8
Identities = 10/18 (55%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
Frame = +2
Query: 194 ERTHTL-FIFSNIPCLSR 244
E+TH L ++F N+PCL R
Sbjct: 163 EQTHALQYVFQNLPCLPR 180
>Z81523-4|CAB04243.1| 824|Caenorhabditis elegans Hypothetical
protein F32H2.3 protein.
Length = 824
Score = 26.2 bits (55), Expect = 9.0
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -1
Query: 267 LNFFFSLTRDKQGILEKIKSVCVRSDAR-LEFTGYKKLNETIREIVLYYDNT 115
+NFF S T + K K +C D+ LE T ++ N+T V NT
Sbjct: 769 INFFTSTTEFRAATSRKKKEICSNDDSTLLETTAFR--NQTFVNDVTIVPNT 818
>AY340594-1|AAQ17186.1| 824|Caenorhabditis elegans SPD-2 protein.
Length = 824
Score = 26.2 bits (55), Expect = 9.0
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -1
Query: 267 LNFFFSLTRDKQGILEKIKSVCVRSDAR-LEFTGYKKLNETIREIVLYYDNT 115
+NFF S T + K K +C D+ LE T ++ N+T V NT
Sbjct: 769 INFFTSTTEFRAATSRKKKEICSNDDSTLLETTAFR--NQTFVNDVTIVPNT 818
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,814,800
Number of Sequences: 27780
Number of extensions: 136664
Number of successful extensions: 336
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 336
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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