Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5a12
         (767 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 6/22 (27%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
 Frame = +1

Query: 388 ICILFYFCVFVLL-LGVIFIAC 450
           +CI +++C F++  + ++F+ C
Sbjct: 144 LCIYYFYCAFIIFTVHLLFLLC 165



 Score = 23.8 bits (49), Expect = 1.5
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = +1

Query: 376 LVINICILFYFCVFVLLLGVIF 441
           L+  +CI +++C  ++LL + +
Sbjct: 279 LLFLLCIYYFYCALIILLCIYY 300



 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +1

Query: 376 LVINICILFYFCVFVLLLGVIFIAC 450
           L+  +CI  +FC F++    +   C
Sbjct: 160 LLFLLCIYHFFCAFIIFTMHLLFCC 184



 Score = 23.0 bits (47), Expect = 2.7
 Identities = 5/25 (20%), Positives = 15/25 (60%)
 Frame = +1

Query: 376 LVINICILFYFCVFVLLLGVIFIAC 450
           ++  + +LF  C++  ++ + F+ C
Sbjct: 121 IIFTVHLLFLLCIYYFVVPLFFLLC 145



 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/26 (26%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +1

Query: 376 LVINICILFYFCVFVLL-LGVIFIAC 450
           L+I +CI +++  F+L  + ++ + C
Sbjct: 232 LIILLCIYYFYYAFILFTVHLLLLVC 257


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 655 EHWGKNCEKNQKHYSVGLGNS 717
           +H GKNCE   + +  GLG +
Sbjct: 446 KHTGKNCEIYDRGFPGGLGRA 466


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 377 LLLIYVFCFIFAFLFSYW 430
           +L  + FC I  F++ YW
Sbjct: 9   VLFFFSFCCILFFIYLYW 26


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 370 TGLVINICILFYFCVFVLLL 429
           T    N  ILFY  VFV+L+
Sbjct: 318 TNKYCNFIILFYLSVFVILV 337


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +2

Query: 371 LVLLLIYVFCFIFAFLFSYWALSLL 445
           + +LLI +F   FA++F  +A  ++
Sbjct: 378 IYVLLINIFASYFAYIFGKFACKIM 402


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +2

Query: 371 LVLLLIYVFCFIFAFLFSYWALSLL 445
           + +LLI +F   FA++F  +A  ++
Sbjct: 378 IYVLLINIFASYFAYIFGKFACKIM 402


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +2

Query: 371 LVLLLIYVFCFIFAFLFSYWALSLL 445
           + +LLI +F   FA++F  +A  ++
Sbjct: 378 IYVLLINIFASYFAYIFGKFACKIM 402


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +2

Query: 371 LVLLLIYVFCFIFAFLFSYWALSLL 445
           + +LLI +F   FA++F  +A  ++
Sbjct: 378 IYVLLINIFASYFAYIFGKFACKIM 402


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,113
Number of Sequences: 336
Number of extensions: 3994
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)