Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5a12
         (767 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039720-1|AAB96694.1|  437|Caenorhabditis elegans Hypothetical ...    30   1.6  
L07144-9|AAK21441.1|  737|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z69384-2|CAD89746.1|  521|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z69384-1|CAA93416.1|  520|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z81047-6|CAB02833.2|  381|Caenorhabditis elegans Hypothetical pr...    29   4.8  
U53148-2|AAB37078.1|  360|Caenorhabditis elegans Hypothetical pr...    28   6.4  

>AF039720-1|AAB96694.1|  437|Caenorhabditis elegans Hypothetical
           protein F33D11.5 protein.
          Length = 437

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = +1

Query: 376 LVINICILFYFCVFVLLLGVIFIACGGR 459
           LVIN  IL  FC   +L GV++IA GGR
Sbjct: 197 LVINASILLIFC---MLGGVLYIAAGGR 221


>L07144-9|AAK21441.1|  737|Caenorhabditis elegans Hypothetical
           protein R05D3.2 protein.
          Length = 737

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
 Frame = +2

Query: 305 DDELSHYEAMESQM*NKQFSSLLVLLLIYVFCFIFAFLFSYWALSLLR--------VVGA 460
           + E S+++ M  +   K+F + +   +I ++ F+  +LF+YW +S L+          G 
Sbjct: 46  EPEESYFQQMVDK--EKEFHNYVRQQIICMWLFMLLYLFAYWLISRLKRKTEREALYAGE 103

Query: 461 *EYPQPKLSSWVS*KAT 511
            +Y   ++S W+S  AT
Sbjct: 104 EDYFVYRVSVWISSTAT 120


>Z69384-2|CAD89746.1|  521|Caenorhabditis elegans Hypothetical
           protein T11G6.1b protein.
          Length = 521

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = +2

Query: 221 ESELSPDSIVIGVSELWEGVVSFRPSVTDDE 313
           E    P +IVIG  EL +GVV  R  VT DE
Sbjct: 472 EERRIPLAIVIGEQELKDGVVKLRNVVTRDE 502


>Z69384-1|CAA93416.1|  520|Caenorhabditis elegans Hypothetical
           protein T11G6.1a protein.
          Length = 520

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = +2

Query: 221 ESELSPDSIVIGVSELWEGVVSFRPSVTDDE 313
           E    P +IVIG  EL +GVV  R  VT DE
Sbjct: 471 EERRIPLAIVIGEQELKDGVVKLRNVVTRDE 501


>Z81047-6|CAB02833.2|  381|Caenorhabditis elegans Hypothetical
           protein C41G6.8 protein.
          Length = 381

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 353 KQFSSLLVLLLIYVFCFIFAFLFSYWALSLLRVV 454
           K F++    ++I + C +F  L+S W  +L RV+
Sbjct: 158 KNFTAAKGSVIILIICLMFWILYSTWQFALFRVL 191


>U53148-2|AAB37078.1|  360|Caenorhabditis elegans Hypothetical
           protein C26F1.6 protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 6/23 (26%), Positives = 19/23 (82%)
 Frame = +2

Query: 368 LLVLLLIYVFCFIFAFLFSYWAL 436
           +++++L+++ C+IF+F+ + W +
Sbjct: 230 MIMVVLVFLVCYIFSFILNIWEI 252


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,282,777
Number of Sequences: 27780
Number of extensions: 363471
Number of successful extensions: 940
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)