Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5a11
         (312 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   2.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   3.0  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       20   6.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   6.9  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    20   6.9  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    20   6.9  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 252 HPRRYVSEFNISS 214
           HP R+  +FNISS
Sbjct: 101 HPHRFRLKFNISS 113


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 264 CHRRHPRRYVSEFNISSCS 208
           C RRH +  +   ++S+CS
Sbjct: 65  CERRHIKGAIPVVSLSTCS 83


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 273 PDGCHRRHPRRYVSEF 226
           P+GC RR  R+  + F
Sbjct: 1   PNGCPRRRGRQTYTRF 16


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -3

Query: 268 WLSSTTPASICF 233
           W SS  P + CF
Sbjct: 686 WTSSDNPCTTCF 697


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 273 PDGCHRRHPRRYVSEF 226
           P+GC RR  R+  + F
Sbjct: 152 PNGCPRRRGRQTYTRF 167


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 273 PDGCHRRHPRRYVSEF 226
           P+GC RR  R+  + F
Sbjct: 211 PNGCPRRRGRQTYTRF 226


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,530
Number of Sequences: 336
Number of extensions: 596
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5730534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)